RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 EVX2Q03828 476 aa24.34■■□□□ 1.49
ABCA3-206ENST00000569062 ARHGEF6Q15052 776 aa24.34■■□□□ 1.49
ABCA3-206ENST00000569062 TATDN1Q6P1N9 297 aa24.34■■□□□ 1.49
ABCA3-206ENST00000569062 PROCA1Q8NCQ7 364 aaPredicted RBP24.34■■□□□ 1.49
ABCA3-206ENST00000569062 GPATCH3Q96I76 525 aa24.34■■□□□ 1.49
ABCA3-206ENST00000569062 DCP1AQ9NPI6 582 aaPredicted RBP24.34■■□□□ 1.49
ABCA3-206ENST00000569062 PRKAB2O43741 272 aa24.33■■□□□ 1.49
ABCA3-206ENST00000569062 POLR3DP05423 398 aaPredicted RBP24.33■■□□□ 1.49
ABCA3-206ENST00000569062 BCRP11274 1271 aa24.33■■□□□ 1.49
ABCA3-206ENST00000569062 UBE3CQ15386 1083 aa24.33■■□□□ 1.49
ABCA3-206ENST00000569062 WDR18Q9BV38 432 aa24.33■■□□□ 1.49
ABCA3-206ENST00000569062 MCM9Q9NXL9 1143 aa24.33■■□□□ 1.49
ABCA3-206ENST00000569062 MTMR2Q13614 643 aa24.32■■□□□ 1.48
ABCA3-206ENST00000569062 SH3D19Q5HYK7 790 aa24.32■■□□□ 1.48
ABCA3-206ENST00000569062 OTUD7AQ8TE49 926 aaPredicted RBP24.32■■□□□ 1.48
ABCA3-206ENST00000569062 GINM1Q9NU53 330 aa24.32■■□□□ 1.48
ABCA3-206ENST00000569062 PTCH2Q9Y6C5 1203 aa24.32■■□□□ 1.48
ABCA3-206ENST00000569062 GH2P01242 217 aa24.31■■□□□ 1.48
ABCA3-206ENST00000569062 PSMC4P43686 418 aa24.31■■□□□ 1.48
ABCA3-206ENST00000569062 BACE1P56817 501 aa24.31■■□□□ 1.48
ABCA3-206ENST00000569062 MLLT1Q03111 559 aaPredicted RBP24.31■■□□□ 1.48
ABCA3-206ENST00000569062 ZSCAN25Q6NSZ9 544 aa24.31■■□□□ 1.48
ABCA3-206ENST00000569062 PUS7LQ9H0K6 701 aaKnown RBP24.31■■□□□ 1.48
ABCA3-206ENST00000569062 CYP2D6P10635 497 aa24.3■■□□□ 1.48
ABCA3-206ENST00000569062 SHMT1P34896 483 aa24.3■■□□□ 1.48
ABCA3-206ENST00000569062 GABPAQ06546 454 aa24.3■■□□□ 1.48
ABCA3-206ENST00000569062 CERKLQ49MI3 558 aaPredicted RBP24.3■■□□□ 1.48
ABCA3-206ENST00000569062 KBTBD3Q8NAB2 608 aa24.3■■□□□ 1.48
ABCA3-206ENST00000569062 SMCR8Q8TEV9 937 aaPredicted RBP24.3■■□□□ 1.48
ABCA3-206ENST00000569062 TRIM47Q96LD4 638 aa24.3■■□□□ 1.48
ABCA3-206ENST00000569062 MYH8P13535 1937 aa24.29■■□□□ 1.48
ABCA3-206ENST00000569062 TTC41PQ6P2S7 1318 aa24.29■■□□□ 1.48
ABCA3-206ENST00000569062 USP17L10C9JJH3 530 aa24.28■■□□□ 1.48
ABCA3-206ENST00000569062 FMNL1O95466 1100 aaPredicted RBP24.28■■□□□ 1.48
ABCA3-206ENST00000569062 GNRH1P01148 92 aa24.28■■□□□ 1.48
ABCA3-206ENST00000569062 PI4K2BQ8TCG2 481 aa24.28■■□□□ 1.48
ABCA3-206ENST00000569062 ATP8A2Q9NTI2 1148 aa24.28■■□□□ 1.48
ABCA3-206ENST00000569062 PNMA3Q9UL41 463 aa24.28■■□□□ 1.48
ABCA3-206ENST00000569062 TNRC18O15417 2968 aaPredicted RBP24.28■■□□□ 1.48
ABCA3-206ENST00000569062 BRCA2P51587 3418 aa24.28■■□□□ 1.48
ABCA3-206ENST00000569062 OSBPP22059 807 aa24.27■■□□□ 1.48
ABCA3-206ENST00000569062 HDAC1Q13547 482 aaPredicted RBP24.27■■□□□ 1.48
ABCA3-206ENST00000569062 ABCB5Q2M3G0 1257 aa24.27■■□□□ 1.48
ABCA3-206ENST00000569062 ANKRD45Q5TZF3 282 aa24.27■■□□□ 1.48
ABCA3-206ENST00000569062 ARMC5Q96C12 935 aa24.27■■□□□ 1.48
ABCA3-206ENST00000569062 ASCC2Q9H1I8 757 aaPredicted RBP24.27■■□□□ 1.48
ABCA3-206ENST00000569062 TMOD4Q9NZQ9 345 aa24.27■■□□□ 1.48
ABCA3-206ENST00000569062 SLC4A4Q9Y6R1 1079 aa24.27■■□□□ 1.48
ABCA3-206ENST00000569062 C19orf81C9J6K1 198 aa24.26■■□□□ 1.47
ABCA3-206ENST00000569062 PABPC4Q13310 644 aaKnown RBP eCLIP24.26■■□□□ 1.47
ABCA3-206ENST00000569062 RAB3GAP1Q15042 981 aa24.26■■□□□ 1.47
ABCA3-206ENST00000569062 ANKRD13CQ8N6S4 541 aa24.26■■□□□ 1.47
ABCA3-206ENST00000569062 RBBP6Q7Z6E9 1792 aaKnown RBP24.25■■□□□ 1.47
ABCA3-206ENST00000569062 CYP2D7A0A087X1C5 515 aa24.25■■□□□ 1.47
ABCA3-206ENST00000569062 SMIM22K7EJ46 135 aa24.25■■□□□ 1.47
ABCA3-206ENST00000569062 SLC9C1Q4G0N8 1177 aa24.25■■□□□ 1.47
ABCA3-206ENST00000569062 SLC44A5Q8NCS7 719 aa24.25■■□□□ 1.47
ABCA3-206ENST00000569062 GCC1Q96CN9 775 aa24.25■■□□□ 1.47
ABCA3-206ENST00000569062 DYNLL2Q96FJ2 89 aa24.25■■□□□ 1.47
ABCA3-206ENST00000569062 SRRDQ9UH36 339 aa24.25■■□□□ 1.47
ABCA3-206ENST00000569062 SALL3Q9BXA9 1300 aa24.25■■□□□ 1.47
ABCA3-206ENST00000569062 ERC2O15083 957 aa24.24■■□□□ 1.47
ABCA3-206ENST00000569062 RNF113AO15541 343 aaKnown RBP24.24■■□□□ 1.47
ABCA3-206ENST00000569062 MX1P20591 662 aa24.24■■□□□ 1.47
ABCA3-206ENST00000569062 GUCY1A2P33402 732 aa24.24■■□□□ 1.47
ABCA3-206ENST00000569062 PRMT2P55345 433 aa24.24■■□□□ 1.47
ABCA3-206ENST00000569062 FCGRTP55899 365 aa24.24■■□□□ 1.47
ABCA3-206ENST00000569062 EXOC6Q8TAG9 804 aa24.24■■□□□ 1.47
ABCA3-206ENST00000569062 OSBP2Q969R2 916 aa24.24■■□□□ 1.47
ABCA3-206ENST00000569062 ZNF333Q96JL9 665 aa24.24■■□□□ 1.47
ABCA3-206ENST00000569062 CABP5Q9NP86 173 aa24.24■■□□□ 1.47
ABCA3-206ENST00000569062 EMILIN3Q9NT22 766 aa24.24■■□□□ 1.47
ABCA3-206ENST00000569062 USP17L12C9JPN9 530 aa24.23■■□□□ 1.47
ABCA3-206ENST00000569062 USP17L21D6R901 530 aa24.23■■□□□ 1.47
ABCA3-206ENST00000569062 GLRX3O76003 335 aaKnown RBP24.23■■□□□ 1.47
ABCA3-206ENST00000569062 HOXD10P28358 340 aa24.23■■□□□ 1.47
ABCA3-206ENST00000569062 ZYXQ15942 572 aaKnown RBP24.23■■□□□ 1.47
ABCA3-206ENST00000569062 C12orf60Q5U649 245 aa24.23■■□□□ 1.47
ABCA3-206ENST00000569062 SH3TC2Q8TF17 1288 aa24.23■■□□□ 1.47
ABCA3-206ENST00000569062 APPBP2Q92624 585 aa24.23■■□□□ 1.47
ABCA3-206ENST00000569062 STRBPQ96SI9 672 aaKnown RBP24.23■■□□□ 1.47
ABCA3-206ENST00000569062 MYPNQ86TC9 1320 aa24.23■■□□□ 1.47
ABCA3-206ENST00000569062 POTEFA5A3E0 1075 aa24.22■■□□□ 1.47
ABCA3-206ENST00000569062 HOXA7P31268 230 aaPredicted RBP24.22■■□□□ 1.47
ABCA3-206ENST00000569062 AAMPQ13685 434 aa24.22■■□□□ 1.47
ABCA3-206ENST00000569062 SEPT2Q15019 361 aa24.22■■□□□ 1.47
ABCA3-206ENST00000569062 FAM110CQ1W6H9 321 aa24.22■■□□□ 1.47
ABCA3-206ENST00000569062 USP17L2Q6R6M4 530 aa24.22■■□□□ 1.47
ABCA3-206ENST00000569062 NBPF11Q86T75 865 aa24.22■■□□□ 1.47
ABCA3-206ENST00000569062 ACER1Q8TDN7 264 aa24.22■■□□□ 1.47
ABCA3-206ENST00000569062 FEZ1Q99689 392 aa24.22■■□□□ 1.47
ABCA3-206ENST00000569062 ZBTB47Q9UFB7 747 aaPredicted RBP24.22■■□□□ 1.47
ABCA3-206ENST00000569062 SWAP70Q9UH65 585 aa24.22■■□□□ 1.47
ABCA3-206ENST00000569062 GABRQQ9UN88 632 aa24.22■■□□□ 1.47
ABCA3-206ENST00000569062 DOCK3Q8IZD9 2030 aa24.22■■□□□ 1.47
ABCA3-206ENST00000569062 MPHOSPH10O00566 681 aaKnown RBP24.21■■□□□ 1.47
ABCA3-206ENST00000569062 ZFYP08048 801 aaPredicted RBP24.21■■□□□ 1.47
ABCA3-206ENST00000569062 GCLCP48506 637 aaPredicted RBP24.21■■□□□ 1.47
ABCA3-206ENST00000569062 IRX3P78415 501 aaPredicted RBP24.21■■□□□ 1.47
ABCA3-206ENST00000569062 PRKCZQ05513 592 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms