RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 FPGT-TNNI3KV9GXZ4 949 aa18.85■□□□□ 0.61
PKD1-236ENST00000568796 C19orf81C9J6K1 198 aa18.84■□□□□ 0.61
PKD1-236ENST00000568796 USP17L10C9JJH3 530 aa18.84■□□□□ 0.61
PKD1-236ENST00000568796 SOX1O00570 391 aaPredicted RBP18.84■□□□□ 0.61
PKD1-236ENST00000568796 HLA-DOAP06340 250 aa18.84■□□□□ 0.61
PKD1-236ENST00000568796 PPP4CP60510 307 aa18.84■□□□□ 0.61
PKD1-236ENST00000568796 HERVK_113P62684 666 aa18.84■□□□□ 0.61
PKD1-236ENST00000568796 PDE3AQ14432 1141 aa18.84■□□□□ 0.61
PKD1-236ENST00000568796 SHROOM1Q2M3G4 852 aaPredicted RBP18.84■□□□□ 0.61
PKD1-236ENST00000568796 ADGRA1Q86SQ6 560 aa18.84■□□□□ 0.61
PKD1-236ENST00000568796 TRIB2Q92519 343 aa18.84■□□□□ 0.61
PKD1-236ENST00000568796 LRCH3Q96II8 777 aa18.84■□□□□ 0.61
PKD1-236ENST00000568796 DNAJC18Q9H819 358 aa18.84■□□□□ 0.61
PKD1-236ENST00000568796 CWC22Q9HCG8 908 aaKnown RBP18.84■□□□□ 0.61
PKD1-236ENST00000568796 CYP2E1P05181 493 aaPredicted RBP18.83■□□□□ 0.6
PKD1-236ENST00000568796 PRKAR2AP13861 404 aaKnown RBP18.83■□□□□ 0.6
PKD1-236ENST00000568796 HOXA7P31268 230 aaPredicted RBP18.83■□□□□ 0.6
PKD1-236ENST00000568796 JAG1P78504 1218 aa18.83■□□□□ 0.6
PKD1-236ENST00000568796 TMEM57Q8N5G2 664 aa18.83■□□□□ 0.6
PKD1-236ENST00000568796 PAGR1Q9BTK6 254 aa18.83■□□□□ 0.6
PKD1-236ENST00000568796 C11orf49Q9H6J7 331 aa18.83■□□□□ 0.6
PKD1-236ENST00000568796 TXNRD2Q9NNW7 524 aa18.83■□□□□ 0.6
PKD1-236ENST00000568796 GPR108Q9NPR9 543 aa18.83■□□□□ 0.6
PKD1-236ENST00000568796 SURF6O75683 361 aaKnown RBP18.82■□□□□ 0.6
PKD1-236ENST00000568796 SYN1P17600 705 aa18.82■□□□□ 0.6
PKD1-236ENST00000568796 CYP7A1P22680 504 aa18.82■□□□□ 0.6
PKD1-236ENST00000568796 ZAP70P43403 619 aa18.82■□□□□ 0.6
PKD1-236ENST00000568796 DYNLL1P63167 89 aaKnown RBP18.82■□□□□ 0.6
PKD1-236ENST00000568796 SOCS4Q8WXH5 440 aa18.82■□□□□ 0.6
PKD1-236ENST00000568796 ZBTB21Q9ULJ3 1066 aa18.82■□□□□ 0.6
PKD1-236ENST00000568796 ZKSCAN1P17029 563 aaPredicted RBP18.81■□□□□ 0.6
PKD1-236ENST00000568796 MAPK4P31152 587 aa18.81■□□□□ 0.6
PKD1-236ENST00000568796 SLC17A8Q8NDX2 589 aa18.81■□□□□ 0.6
PKD1-236ENST00000568796 C1orf115Q9H7X2 142 aa18.81■□□□□ 0.6
PKD1-236ENST00000568796 PIH1D3Q9NQM4 214 aaKnown RBP18.81■□□□□ 0.6
PKD1-236ENST00000568796 GINM1Q9NU53 330 aa18.81■□□□□ 0.6
PKD1-236ENST00000568796 USP5P45974 858 aa18.8■□□□□ 0.6
PKD1-236ENST00000568796 ERVK-9P63128 1117 aa18.8■□□□□ 0.6
PKD1-236ENST00000568796 ERVK-24P63145 666 aa18.8■□□□□ 0.6
PKD1-236ENST00000568796 ATP8B2P98198 1209 aa18.8■□□□□ 0.6
PKD1-236ENST00000568796 POLA2Q14181 598 aa18.8■□□□□ 0.6
PKD1-236ENST00000568796 ZYXQ15942 572 aaKnown RBP18.8■□□□□ 0.6
PKD1-236ENST00000568796 ZKSCAN2Q63HK3 967 aa18.8■□□□□ 0.6
PKD1-236ENST00000568796 USP17L2Q6R6M4 530 aa18.8■□□□□ 0.6
PKD1-236ENST00000568796 METTL16Q86W50 562 aaKnown RBP18.8■□□□□ 0.6
PKD1-236ENST00000568796 FEZ1Q99689 392 aa18.8■□□□□ 0.6
PKD1-236ENST00000568796 GDF15Q99988 308 aa18.8■□□□□ 0.6
PKD1-236ENST00000568796 RBPJLQ9UBG7 517 aa18.8■□□□□ 0.6
PKD1-236ENST00000568796 OGDHLQ9ULD0 1010 aa18.8■□□□□ 0.6
PKD1-236ENST00000568796 ALPK3Q96L96 1907 aa18.8■□□□□ 0.6
PKD1-236ENST00000568796 SIPA1L1O43166 1804 aa18.79■□□□□ 0.6
PKD1-236ENST00000568796 CCER2I3L3R5 266 aa18.79■□□□□ 0.6
PKD1-236ENST00000568796 IDH1O75874 414 aaKnown RBP18.79■□□□□ 0.6
PKD1-236ENST00000568796 GH2P01242 217 aa18.79■□□□□ 0.6
PKD1-236ENST00000568796 XRCC5P13010 732 aaKnown RBP18.79■□□□□ 0.6
PKD1-236ENST00000568796 MNX1P50219 401 aaPredicted RBP18.79■□□□□ 0.6
PKD1-236ENST00000568796 Q3C1V9 767 aa18.79■□□□□ 0.6
PKD1-236ENST00000568796 PLEKHH3Q7Z736 793 aa18.79■□□□□ 0.6
PKD1-236ENST00000568796 TRMT44Q8IYL2 757 aaKnown RBP18.79■□□□□ 0.6
PKD1-236ENST00000568796 MIGA1Q8NAN2 632 aa18.79■□□□□ 0.6
PKD1-236ENST00000568796 SSH3Q8TE77 659 aa18.79■□□□□ 0.6
PKD1-236ENST00000568796 GTF3C2Q8WUA4 911 aaPredicted RBP18.79■□□□□ 0.6
PKD1-236ENST00000568796 CCDC8Q9H0W5 538 aaPredicted RBP18.79■□□□□ 0.6
PKD1-236ENST00000568796 PORCNQ9H237 461 aa18.79■□□□□ 0.6
PKD1-236ENST00000568796 BMP8BP34820 402 aa18.78■□□□□ 0.6
PKD1-236ENST00000568796 RGS2P41220 211 aa18.78■□□□□ 0.6
PKD1-236ENST00000568796 CACNB2Q08289 660 aaPredicted RBP18.78■□□□□ 0.6
PKD1-236ENST00000568796 MAP3K21Q5TCX8 1036 aa18.78■□□□□ 0.6
PKD1-236ENST00000568796 WDR78Q5VTH9 848 aa18.78■□□□□ 0.6
PKD1-236ENST00000568796 GPR142Q7Z601 462 aa18.78■□□□□ 0.6
PKD1-236ENST00000568796 FTSJ3Q8IY81 847 aaKnown RBP18.78■□□□□ 0.6
PKD1-236ENST00000568796 EMILIN3Q9NT22 766 aa18.78■□□□□ 0.6
PKD1-236ENST00000568796 MAST2Q6P0Q8 1798 aa18.78■□□□□ 0.6
PKD1-236ENST00000568796 MAGEA10P43363 369 aaPredicted RBP18.77■□□□□ 0.6
PKD1-236ENST00000568796 RAB3GAP1Q15042 981 aa18.77■□□□□ 0.6
PKD1-236ENST00000568796 CCL14Q16627 93 aa18.77■□□□□ 0.6
PKD1-236ENST00000568796 ZNF512BQ96KM6 892 aaPredicted RBP18.77■□□□□ 0.6
PKD1-236ENST00000568796 TLR7Q9NYK1 1049 aaKnown RBP18.77■□□□□ 0.6
PKD1-236ENST00000568796 DBNLQ9UJU6 430 aaKnown RBP18.77■□□□□ 0.6
PKD1-236ENST00000568796 LAMA3Q16787 3333 aa18.77■□□□□ 0.59
PKD1-236ENST00000568796 PLXNB2O15031 1838 aa18.77■□□□□ 0.59
PKD1-236ENST00000568796 CCND3P30281 292 aaPredicted RBP18.76■□□□□ 0.59
PKD1-236ENST00000568796 ITPRIPQ8IWB1 547 aa18.76■□□□□ 0.59
PKD1-236ENST00000568796 MAGEB6Q8N7X4 407 aa18.76■□□□□ 0.59
PKD1-236ENST00000568796 NDUFB9Q9Y6M9 179 aa18.76■□□□□ 0.59
PKD1-236ENST00000568796 DDX60LQ5H9U9 1706 aaKnown RBP18.76■□□□□ 0.59
PKD1-236ENST00000568796 PFASO15067 1338 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 USP17L15C9J2P7 530 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 USP17L13C9JLJ4 530 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 USP17L11C9JVI0 530 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 USP17L18D6R9N7 530 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 USP17L22D6RA61 530 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 USP17L17D6RBQ6 530 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 USP17L19D6RCP7 530 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 USP17L20D6RJB6 530 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 IGSF3O75054 1194 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 CCNA1P78396 465 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 USP17L24Q0WX57 530 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 MORN1Q5T089 497 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 USP6NLQ92738 828 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms