RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 WNT10AQ9GZT5 417 aa11.84□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 TAGLNQ01995 201 aaKnown RBP11.83□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 IFI16Q16666 785 aaKnown RBP11.83□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 ARMCX6Q7L4S7 300 aa11.83□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 HEXIM2Q96MH2 286 aaKnown RBP11.83□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 GTF2IRD1Q9UHL9 959 aa11.83□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 USP31Q70CQ4 1352 aa11.82□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 SORBS3O60504 671 aa11.82□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 LRIG2O94898 1065 aa11.82□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 CEACAM5P06731 702 aa11.82□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 ETF1P62495 437 aaKnown RBP11.82□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 FAM214BQ7L5A3 538 aa11.82□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 MIR1-1HGQ9H1L0 117 aa11.82□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 BNIP3Q12983 259 aa11.81□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 ZNF574Q6ZN55 896 aaPredicted RBP11.81□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 SPRED2Q7Z698 418 aa11.81□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 FBRSQ9HAH7 460 aa11.81□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 MRS2Q9HD23 443 aa11.81□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 VAV3Q9UKW4 847 aa11.81□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 ADAMTS12P58397 1594 aa11.8□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 TFE3P19532 575 aaPredicted RBP11.8□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 CRELD1Q96HD1 420 aa11.8□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 PLAGL2Q9UPG8 496 aa11.8□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 FHAD1B1AJZ9 1412 aa11.79□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 IGF2BP3O00425 579 aaKnown RBP eCLIP11.79□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 GFRA2O00451 464 aa11.79□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 PAX4O43316 350 aa11.79□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 EOMESO95936 686 aa11.79□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 ITIH2P19823 946 aa11.79□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 PRKCQQ04759 706 aa11.79□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 SLBPQ14493 270 aaKnown RBP eCLIP11.79□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 WFDC3Q8IUB2 231 aa11.79□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 HID1Q8IV36 788 aa11.79□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 FOXQ1Q9C009 403 aa11.79□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 TLR6Q9Y2C9 796 aa11.79□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 TMEM265A0A087WTH1 108 aa11.78□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 GRK4P32298 578 aa11.78□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 CAP2P40123 477 aa11.78□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 NKG7Q16617 165 aa11.78□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 CBLL1Q75N03 491 aa11.78□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 HRASLS5Q96KN8 279 aa11.78□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 VTI1BQ9UEU0 232 aa11.78□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 TACC3Q9Y6A5 838 aa11.78□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 CEP170Q5SW79 1584 aa11.78□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 ERCC6L2Q5T890 1561 aa11.78□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 NUP160Q12769 1436 aa11.77□□□□□ -0.52
DNAAF4-CCPG1-202ENST00000568310 ITGAEP38570 1179 aa11.77□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 AOC3Q16853 763 aa11.77□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 TSNAXIP1Q2TAA8 658 aa11.77□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 TNKS2Q9H2K2 1166 aa11.77□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 ERICH3Q5RHP9 1530 aa11.76□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 SLITRK5O94991 958 aa11.76□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 CD8BP10966 210 aa11.76□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 PLCL1Q15111 1095 aa11.76□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 MFSD2AQ8NA29 543 aa11.76□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 PHC3Q8NDX5 983 aa11.76□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 JARID2Q92833 1246 aaPredicted RBP11.76□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 PRDM5Q9NQX1 630 aaPredicted RBP11.76□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 SNX11Q9Y5W9 270 aa11.75□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 RPL6Q02878 288 aaKnown RBP11.74□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 DIEXFQ68CQ4 756 aaKnown RBP11.74□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 MIPEPQ99797 713 aa11.74□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 MAPK8IP1Q9UQF2 711 aa11.74□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 GNAT3A8MTJ3 354 aa11.73□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 CD96P40200 585 aa11.73□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 PRAMEF13Q5VWM6 474 aa11.72□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 CCDC84Q86UT8 332 aaPredicted RBP11.72□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 SPACA3Q8IXA5 215 aa11.72□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 TPX2Q9ULW0 747 aaKnown RBP11.72□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 F6X3S4 739 aa11.71□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 CST3P01034 146 aaPredicted RBP11.71□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 PGRP06401 933 aa11.71□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 FUT4P22083 530 aa11.71□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 NKPD1Q17RQ9 610 aa11.71□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 BCL2L13Q9BXK5 485 aa11.71□□□□□ -0.53
DNAAF4-CCPG1-202ENST00000568310 LMNB2Q03252 620 aa11.7□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 PDE4BQ07343 736 aa11.7□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 CAMK2GQ13555 558 aaPredicted RBP11.7□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 ZNF792Q3KQV3 632 aa11.7□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 LETMD1Q6P1Q0 360 aa11.7□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 RELL1Q8IUW5 271 aa11.7□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 MRPL41Q8IXM3 137 aaKnown RBP11.7□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 ASB11Q8WXH4 323 aa11.7□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 RSRP1Q9BUV0 290 aa11.7□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 TJP2Q9UDY2 1190 aa11.7□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 SHROOM2Q13796 1616 aa11.7□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 PRG4Q92954 1404 aaPredicted RBP11.69□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 BNC2Q6ZN30 1099 aaPredicted RBP11.69□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 RIN3Q8TB24 985 aa11.69□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 XAGE3Q8WTP9 111 aa11.69□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 TMEM74Q96NL1 305 aa11.69□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 KRTAP9-2Q9BYQ4 174 aa11.69□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 CNTNAP4Q9C0A0 1308 aa11.68□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 PF4P02776 101 aa11.68□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 GBP2P32456 591 aaPredicted RBP11.68□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 PWP1Q13610 501 aa11.68□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 ZNF326Q5BKZ1 582 aaKnown RBP11.68□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 SFRP5Q5T4F7 317 aa11.68□□□□□ -0.54
DNAAF4-CCPG1-202ENST00000568310 ANGEL2Q5VTE6 544 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms