RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 POTEDQ86YR6 584 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 NOSTRINQ8IVI9 506 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 SECISBP2LQ93073 1101 aaKnown RBP12.26□□□□□ -0.45
PALB2-206ENST00000568219 METTL22Q9BUU2 404 aaPredicted RBP12.26□□□□□ -0.45
PALB2-206ENST00000568219 PUS3Q9BZE2 481 aaKnown RBP12.26□□□□□ -0.45
PALB2-206ENST00000568219 SBNO1A3KN83 1393 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 TLDC2A0PJX2 215 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 GUCY2CP25092 1073 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 SPAG1Q07617 926 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 ACTN3Q08043 901 aaPredicted RBP12.26□□□□□ -0.45
PALB2-206ENST00000568219 LRRC31Q6UY01 552 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 METTL16Q86W50 562 aaKnown RBP12.26□□□□□ -0.45
PALB2-206ENST00000568219 EHBP1Q8NDI1 1231 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 EPSTI1Q96J88 318 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 VPS54Q9P1Q0 977 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 RILPL1Q5EBL4 403 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 CSRNP2Q9H175 543 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 PHF8Q9UPP1 1060 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 ASXL2Q76L83 1435 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 MYOM1P52179 1685 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 QRICH2Q9H0J4 1663 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 SNRPA1P09661 255 aaKnown RBP12.25□□□□□ -0.45
PALB2-206ENST00000568219 STAT6P42226 847 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 PTPN12Q05209 780 aaKnown RBP12.25□□□□□ -0.45
PALB2-206ENST00000568219 SPATA1Q5VX52 437 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 C8orf74Q6P047 294 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 EP400NLQ6ZTU2 488 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 PNMA8AQ86V59 439 aaPredicted RBP12.25□□□□□ -0.45
PALB2-206ENST00000568219 OR8K1Q8NGG5 319 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 ZNF496Q96IT1 587 aaPredicted RBP12.25□□□□□ -0.45
PALB2-206ENST00000568219 CRB1P82279 1406 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 PRDM1O75626 825 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 CALRP27797 417 aaKnown RBP12.25□□□□□ -0.45
PALB2-206ENST00000568219 PPFIA1Q13136 1202 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 PPP2R5AQ15172 486 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 NAA15Q9BXJ9 866 aaKnown RBP12.25□□□□□ -0.45
PALB2-206ENST00000568219 LRRIQ3A6PVS8 624 aaPredicted RBP12.25□□□□□ -0.45
PALB2-206ENST00000568219 CDC27P30260 824 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 ZNF790Q6PG37 636 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 USP49Q70CQ1 688 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 XAGE2Q96GT9 111 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 CDK5RAP3Q96JB5 506 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 BAIAP2L1Q9UHR4 511 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 PCDHB6Q9Y5E3 794 aa12.25□□□□□ -0.45
PALB2-206ENST00000568219 V9GY48 417 aaPredicted RBP12.25□□□□□ -0.45
PALB2-206ENST00000568219 UBE2Q2LH0YL09 131 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 IGKV5-2P06315 115 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 ZFYP08048 801 aaPredicted RBP12.24□□□□□ -0.45
PALB2-206ENST00000568219 PEX19P40855 299 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 PLCD1P51178 756 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 PRPF4BQ13523 1007 aaKnown RBP12.24□□□□□ -0.45
PALB2-206ENST00000568219 TUBB2AQ13885 445 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 CEP85LQ5SZL2 805 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 IQUBQ8NA54 791 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 ENOX1Q8TC92 643 aaKnown RBP12.24□□□□□ -0.45
PALB2-206ENST00000568219 NELFBQ8WX92 580 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 FAM89AQ96GI7 184 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 CABS1Q96KC9 395 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 TUBB2BQ9BVA1 445 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 SHPRHQ149N8 1683 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 COL3A1P02461 1466 aaPredicted RBP12.24□□□□□ -0.45
PALB2-206ENST00000568219 CDK12Q9NYV4 1490 aaPredicted RBP12.24□□□□□ -0.45
PALB2-206ENST00000568219 MROH7-TTC4A0A0A0MT08 1334 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 ADORA1P30542 326 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 SLC20A2Q08357 652 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 KLHL7Q8IXQ5 586 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 TBC1D31Q96DN5 1066 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 BPIFA3Q9BQP9 254 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 EHD4Q9H223 541 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 KAT14Q9H8E8 782 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 L1RE1Q9UN81 338 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 KIF1BO60333 1816 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 EYA2O00167 538 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 TTF1Q15361 905 aaPredicted RBP12.24□□□□□ -0.45
PALB2-206ENST00000568219 TYW1BQ6NUM6 668 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 RPAINQ86UA6 219 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.24□□□□□ -0.45
PALB2-206ENST00000568219 PUS7LQ9H0K6 701 aaKnown RBP12.24□□□□□ -0.45
PALB2-206ENST00000568219 CXorf56Q9H5V9 222 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 SPHKAPQ2M3C7 1700 aa12.24□□□□□ -0.45
PALB2-206ENST00000568219 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 PAK1Q13153 545 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 ZMYM1Q5SVZ6 1142 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 CHP1Q99653 195 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 SLC24A3Q9HC58 644 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 FAM207AQ9NSI2 230 aaPredicted RBP12.23□□□□□ -0.45
PALB2-206ENST00000568219 SLC4A4Q9Y6R1 1079 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 KCNJ18B7U540 433 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 ZNF185O15231 689 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 HOXB7P09629 217 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 FXR1P51114 621 aaKnown RBP eCLIP12.23□□□□□ -0.45
PALB2-206ENST00000568219 CORO7P57737 925 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 GRIN1Q05586 938 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 KCNJ12Q14500 433 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 DYDC1Q8WWB3 177 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 APPBP2Q92624 585 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 SELENOOQ9BVL4 669 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 REREQ9P2R6 1566 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 ARHGEF10O15013 1369 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 PSMA7O14818 248 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms