RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 UNC5CLQ8IV45 518 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 BHMTQ93088 406 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 ZNF496Q96IT1 587 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-218ENST00000568153 BTBD6Q96KE9 485 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 C11orf16Q9NQ32 467 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 TMOD3Q9NYL9 352 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 POLIQ9UNA4 740 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 USP16Q9Y5T5 823 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 SPATA31A1Q5TZJ5 1347 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 JCADQ9P266 1359 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 NHSL1Q5SYE7 1610 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 PRAMEF22A3QJZ6 481 aa7.65□□□□□ -1.18
CAPN3-218ENST00000568153 KDM6AO15550 1401 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-218ENST00000568153 SIN3BO75182 1162 aa7.65□□□□□ -1.18
CAPN3-218ENST00000568153 SASH3O75995 380 aa7.65□□□□□ -1.18
CAPN3-218ENST00000568153 TARSP26639 723 aaKnown RBP7.65□□□□□ -1.18
CAPN3-218ENST00000568153 DDB1Q16531 1140 aa7.65□□□□□ -1.18
CAPN3-218ENST00000568153 SPATA31A6Q5VVP1 1343 aa7.65□□□□□ -1.18
CAPN3-218ENST00000568153 KANK3Q6NY19 840 aa7.65□□□□□ -1.18
CAPN3-218ENST00000568153 KSR2Q6VAB6 950 aa7.65□□□□□ -1.18
CAPN3-218ENST00000568153 KRT25Q7Z3Z0 450 aa7.65□□□□□ -1.18
CAPN3-218ENST00000568153 BEND7Q8N7W2 519 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-218ENST00000568153 GCC1Q96CN9 775 aa7.65□□□□□ -1.18
CAPN3-218ENST00000568153 TEX13AQ9BXU3 409 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-218ENST00000568153 ZFATQ9P243 1243 aa7.65□□□□□ -1.18
CAPN3-218ENST00000568153 BIN2Q9UBW5 565 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-218ENST00000568153 HDAC5Q9UQL6 1122 aa7.65□□□□□ -1.18
CAPN3-218ENST00000568153 ROBO1Q9Y6N7 1651 aa7.65□□□□□ -1.18
CAPN3-218ENST00000568153 SPATA31A5Q5VU36 1347 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 SPATA31A7Q8IWB4 1347 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 PI4KAP2A4QPH2 592 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 A6NHS1 94 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 GNAI2P04899 355 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 NFKB1P19838 968 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 DGKGP49619 791 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 VPS72Q15906 364 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 CHSY3Q70JA7 882 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 PODNQ7Z5L7 613 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 SMC5Q8IY18 1101 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 ANKRD44Q8N8A2 993 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 PI4KAP1Q8N8J0 262 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 DNAAF4Q8WXU2 420 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 PIGBQ92521 554 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 C8orf37Q96NL8 207 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 PNMA5Q96PV4 448 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 SRCIN1Q9C0H9 1055 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.64□□□□□ -1.19
CAPN3-218ENST00000568153 DLG5Q8TDM6 1919 aa7.64□□□□□ -1.19
CAPN3-218ENST00000568153 LMO7Q8WWI1 1683 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 ADARB2-AS1A8MUL3 147 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 PHF20L1A8MW92 1017 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 HMMRO75330 724 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 ALDH1L1O75891 902 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 GDF11O95390 407 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 ANXA1P04083 346 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 MYL6BP14649 208 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 AMPD1P23109 780 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 HSPA1LP34931 641 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 RGS3P49796 1198 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 ATP8B2P98198 1209 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 AIMP1Q12904 312 aaKnown RBP7.63□□□□□ -1.19
CAPN3-218ENST00000568153 BEND3Q5T5X7 828 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 MEX3CQ5U5Q3 659 aaKnown RBP7.63□□□□□ -1.19
CAPN3-218ENST00000568153 LINC00114Q6XXX2 140 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 COPS6Q7L5N1 327 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 SIRT2Q8IXJ6 389 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 TNFRSF25Q93038 417 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 MEIS3Q99687 375 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 USP44Q9H0E7 712 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 MAP3K2Q9Y2U5 619 aa7.63□□□□□ -1.19
CAPN3-218ENST00000568153 ELOA3CA0A087WX78 387 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-218ENST00000568153 ELOA3DA6NLF2 546 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-218ENST00000568153 RARAP10276 462 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 NUCB1Q02818 461 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 PROSER3Q2NL68 480 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 ELOA3BQ3SY89 546 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 C8orf34Q49A92 452 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 ANKRD45Q5TZF3 282 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 SKAP1Q86WV1 359 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 GJD3Q8N144 294 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 TMEM151AQ8N4L1 468 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 ELOA3Q8NG57 546 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 XAGE3Q8WTP9 111 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 DCTPP1Q9H773 170 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 EFCC1Q9HA90 598 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 RRAGCQ9HB90 399 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 ATG3Q9NT62 314 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 USP21Q9UK80 565 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 BRPF3Q9ULD4 1205 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 ASAP1Q9ULH1 1129 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 MKL2Q9ULH7 1088 aa7.62□□□□□ -1.19
CAPN3-218ENST00000568153 FNDC3AQ9Y2H6 1198 aaKnown RBP7.62□□□□□ -1.19
CAPN3-218ENST00000568153 RGPD2P0DJD1 1756 aa7.61□□□□□ -1.19
CAPN3-218ENST00000568153 RGPD5Q99666 1765 aa7.61□□□□□ -1.19
CAPN3-218ENST00000568153 CRYBG1Q9Y4K1 1723 aa7.61□□□□□ -1.19
CAPN3-218ENST00000568153 STARD3NLO95772 234 aa7.61□□□□□ -1.19
CAPN3-218ENST00000568153 A1BGP04217 495 aa7.61□□□□□ -1.19
CAPN3-218ENST00000568153 UBTFL1P0CB47 393 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-218ENST00000568153 PCSK2P16519 638 aa7.61□□□□□ -1.19
CAPN3-218ENST00000568153 NEXNQ0ZGT2 675 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms