RNA–Protein interactions for RNA: ENST00000567883.5

FANCA-227, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-227ENST00000567883 LRCH3Q96II8 777 aa13.61□□□□□ -0.23
FANCA-227ENST00000567883 P2RX7Q99572 595 aaKnown RBP13.61□□□□□ -0.23
FANCA-227ENST00000567883 C11orf49Q9H6J7 331 aa13.61□□□□□ -0.23
FANCA-227ENST00000567883 GPR108Q9NPR9 543 aa13.61□□□□□ -0.23
FANCA-227ENST00000567883 TMOD4Q9NZQ9 345 aa13.61□□□□□ -0.23
FANCA-227ENST00000567883 USP17L10C9JJH3 530 aa13.6□□□□□ -0.23
FANCA-227ENST00000567883 IPO8O15397 1037 aaKnown RBP13.6□□□□□ -0.23
FANCA-227ENST00000567883 HERVK_113P62684 666 aa13.6□□□□□ -0.23
FANCA-227ENST00000567883 MTMR2Q13614 643 aa13.6□□□□□ -0.23
FANCA-227ENST00000567883 LRIT3Q3SXY7 679 aa13.6□□□□□ -0.23
FANCA-227ENST00000567883 NAA16Q6N069 864 aaPredicted RBP13.6□□□□□ -0.23
FANCA-227ENST00000567883 C7orf61Q8IZ16 206 aa13.6□□□□□ -0.23
FANCA-227ENST00000567883 GPRC5AQ8NFJ5 357 aa13.6□□□□□ -0.23
FANCA-227ENST00000567883 SOCS4Q8WXH5 440 aa13.6□□□□□ -0.23
FANCA-227ENST00000567883 NUDT12Q9BQG2 462 aa13.6□□□□□ -0.23
FANCA-227ENST00000567883 AATFQ9NY61 560 aaKnown RBP eCLIP13.6□□□□□ -0.231e-6■□□□□ 8.1
FANCA-227ENST00000567883 MYO5AQ9Y4I1 1855 aaKnown RBP13.6□□□□□ -0.23
FANCA-227ENST00000567883 PNMA6EA0A0J9YXQ4 647 aa13.59□□□□□ -0.23
FANCA-227ENST00000567883 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
FANCA-227ENST00000567883 CYP2B6P20813 491 aa13.59□□□□□ -0.23
FANCA-227ENST00000567883 MAPK4P31152 587 aa13.59□□□□□ -0.23
FANCA-227ENST00000567883 JAG1P78504 1218 aa13.59□□□□□ -0.23
FANCA-227ENST00000567883 GTF3C2Q8WUA4 911 aaPredicted RBP13.59□□□□□ -0.23
FANCA-227ENST00000567883 TGFBRAP1Q8WUH2 860 aa13.59□□□□□ -0.23
FANCA-227ENST00000567883 USP6NLQ92738 828 aa13.59□□□□□ -0.23
FANCA-227ENST00000567883 ZNF512BQ96KM6 892 aaPredicted RBP13.59□□□□□ -0.23
FANCA-227ENST00000567883 DNAJC18Q9H819 358 aa13.59□□□□□ -0.23
FANCA-227ENST00000567883 RBPJLQ9UBG7 517 aa13.59□□□□□ -0.23
FANCA-227ENST00000567883 FLT1P17948 1338 aa13.59□□□□□ -0.23
FANCA-227ENST00000567883 DLL1O00548 723 aa13.58□□□□□ -0.24
FANCA-227ENST00000567883 CYP2E1P05181 493 aaPredicted RBP13.58□□□□□ -0.24
FANCA-227ENST00000567883 TRIM27P14373 513 aa13.58□□□□□ -0.24
FANCA-227ENST00000567883 PDE3AQ14432 1141 aa13.58□□□□□ -0.24
FANCA-227ENST00000567883 CCDC158Q5M9N0 1113 aa13.58□□□□□ -0.24
FANCA-227ENST00000567883 ATF7IPQ6VMQ6 1270 aa13.58□□□□□ -0.24
FANCA-227ENST00000567883 CRACR2BQ8N4Y2 399 aaPredicted RBP13.58□□□□□ -0.24
FANCA-227ENST00000567883 TXNRD2Q9NNW7 524 aa13.58□□□□□ -0.24
FANCA-227ENST00000567883 ZMYND8Q9ULU4 1186 aaPredicted RBP13.58□□□□□ -0.24
FANCA-227ENST00000567883 MYH1P12882 1939 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 COL6A1P12109 1028 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 MAGEA10P43363 369 aaPredicted RBP13.57□□□□□ -0.24
FANCA-227ENST00000567883 ERVK-9P63128 1117 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 ERVK-24P63145 666 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 Q3C1V9 767 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 TTC39AQ5SRH9 613 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 MORN1Q5T089 497 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 ADGRA1Q86SQ6 560 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 MAPKAPK5Q8IW41 473 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 TDHQ8IZJ6 230 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 TRIM34Q9BYJ4 488 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 PALD1Q9ULE6 856 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 ZBTB21Q9ULJ3 1066 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 PFASO15067 1338 aa13.57□□□□□ -0.24
FANCA-227ENST00000567883 PEX10O60683 326 aa13.56□□□□□ -0.24
FANCA-227ENST00000567883 ZKSCAN1P17029 563 aaPredicted RBP13.56□□□□□ -0.24
FANCA-227ENST00000567883 RGS2P41220 211 aa13.56□□□□□ -0.24
FANCA-227ENST00000567883 CACNB2Q08289 660 aaPredicted RBP13.56□□□□□ -0.24
FANCA-227ENST00000567883 POLA2Q14181 598 aa13.56□□□□□ -0.24
FANCA-227ENST00000567883 TNNI3KQ59H18 835 aa13.56□□□□□ -0.24
FANCA-227ENST00000567883 LHX8Q68G74 356 aa13.56□□□□□ -0.24
FANCA-227ENST00000567883 USP17L2Q6R6M4 530 aa13.56□□□□□ -0.24
FANCA-227ENST00000567883 GPR142Q7Z601 462 aa13.56□□□□□ -0.24
FANCA-227ENST00000567883 PORCNQ9H237 461 aa13.56□□□□□ -0.24
FANCA-227ENST00000567883 EMILIN3Q9NT22 766 aa13.56□□□□□ -0.24
FANCA-227ENST00000567883 FPGT-TNNI3KV9GXZ4 949 aa13.56□□□□□ -0.24
FANCA-227ENST00000567883 GDF11O95390 407 aa13.55□□□□□ -0.24
FANCA-227ENST00000567883 HLA-DOAP06340 250 aa13.55□□□□□ -0.24
FANCA-227ENST00000567883 SYN1P17600 705 aa13.55□□□□□ -0.24
FANCA-227ENST00000567883 SHROOM1Q2M3G4 852 aaPredicted RBP13.55□□□□□ -0.24
FANCA-227ENST00000567883 POTEEQ6S8J3 1075 aa13.55□□□□□ -0.24
FANCA-227ENST00000567883 PLEKHH3Q7Z736 793 aa13.55□□□□□ -0.24
FANCA-227ENST00000567883 CERS3Q8IU89 383 aa13.55□□□□□ -0.24
FANCA-227ENST00000567883 CCAR1Q8IX12 1150 aaKnown RBP13.55□□□□□ -0.24
FANCA-227ENST00000567883 DEFB123Q8N688 67 aa13.55□□□□□ -0.24
FANCA-227ENST00000567883 SSH3Q8TE77 659 aa13.55□□□□□ -0.24
FANCA-227ENST00000567883 C12orf42Q96LP6 360 aa13.55□□□□□ -0.24
FANCA-227ENST00000567883 DBNDD2Q9BQY9 259 aa13.55□□□□□ -0.24
FANCA-227ENST00000567883 RABGAP1Q9Y3P9 1069 aa13.55□□□□□ -0.24
FANCA-227ENST00000567883 EYSQ5T1H1 3165 aa13.54□□□□□ -0.24
FANCA-227ENST00000567883 ATP8B2P98198 1209 aa13.54□□□□□ -0.24
FANCA-227ENST00000567883 CCL14Q16627 93 aa13.54□□□□□ -0.24
FANCA-227ENST00000567883 TATDN1Q6P1N9 297 aa13.54□□□□□ -0.24
FANCA-227ENST00000567883 TMED8Q6PL24 325 aaPredicted RBP13.54□□□□□ -0.24
FANCA-227ENST00000567883 APBA2Q99767 749 aa13.54□□□□□ -0.24
FANCA-227ENST00000567883 PAGR1Q9BTK6 254 aa13.54□□□□□ -0.24
FANCA-227ENST00000567883 UBE2OQ9C0C9 1292 aaKnown RBP13.54□□□□□ -0.24
FANCA-227ENST00000567883 TNNQ9UQP3 1299 aa13.54□□□□□ -0.24
FANCA-227ENST00000567883 STXBP5LQ9Y2K9 1186 aa13.54□□□□□ -0.24
FANCA-227ENST00000567883 FRMPD3Q5JV73 1810 aa13.54□□□□□ -0.24
FANCA-227ENST00000567883 USP17L15C9J2P7 530 aa13.53□□□□□ -0.24
FANCA-227ENST00000567883 USP17L13C9JLJ4 530 aa13.53□□□□□ -0.24
FANCA-227ENST00000567883 USP17L11C9JVI0 530 aa13.53□□□□□ -0.24
FANCA-227ENST00000567883 USP17L18D6R9N7 530 aa13.53□□□□□ -0.24
FANCA-227ENST00000567883 USP17L22D6RA61 530 aa13.53□□□□□ -0.24
FANCA-227ENST00000567883 USP17L17D6RBQ6 530 aa13.53□□□□□ -0.24
FANCA-227ENST00000567883 USP17L19D6RCP7 530 aa13.53□□□□□ -0.24
FANCA-227ENST00000567883 USP17L20D6RJB6 530 aa13.53□□□□□ -0.24
FANCA-227ENST00000567883 GLRX3O76003 335 aaKnown RBP13.53□□□□□ -0.24
FANCA-227ENST00000567883 GH2P01242 217 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms