RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 MAP2K2P36507 400 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 VEGFBP49765 207 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 PPATQ06203 517 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 PDE4BQ07343 736 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 PPARAQ07869 468 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 SREBF2Q12772 1141 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 SPRYD7Q5W111 196 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 TATDN1Q6P1N9 297 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 KIAA1211Q6ZU35 1233 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 OPTNQ96CV9 577 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 OTUD5Q96G74 571 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 AS3MTQ9HBK9 375 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 CABP5Q9NP86 173 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.49□□□□□ -0.09
SF3B3-208ENST00000567250 CTNNA3Q9UI47 895 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 LOC285556D6RIA3 1793 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 CYP2D7A0A087X1C5 515 aa14.48□□□□□ -0.09
SF3B3-208ENST00000567250 FAM155AB1AL88 458 aaPredicted RBP14.48□□□□□ -0.09
SF3B3-208ENST00000567250 FOXP2O15409 715 aa14.48□□□□□ -0.09
SF3B3-208ENST00000567250 PPIL2Q13356 520 aa14.48□□□□□ -0.09
SF3B3-208ENST00000567250 CERKLQ49MI3 558 aaPredicted RBP14.48□□□□□ -0.09
SF3B3-208ENST00000567250 ESYT1Q9BSJ8 1104 aa14.48□□□□□ -0.09
SF3B3-208ENST00000567250 GDF11O95390 407 aa14.47□□□□□ -0.09
SF3B3-208ENST00000567250 PCP11498 1178 aaKnown RBP14.47□□□□□ -0.09
SF3B3-208ENST00000567250 SHMT1P34896 483 aa14.47□□□□□ -0.09
SF3B3-208ENST00000567250 ABCB5Q2M3G0 1257 aa14.47□□□□□ -0.09
SF3B3-208ENST00000567250 DYNLL2Q96FJ2 89 aa14.47□□□□□ -0.09
SF3B3-208ENST00000567250 CCDC17Q96LX7 622 aa14.47□□□□□ -0.09
SF3B3-208ENST00000567250 MKNK2Q9HBH9 465 aa14.47□□□□□ -0.09
SF3B3-208ENST00000567250 ANAPC4Q9UJX5 808 aa14.47□□□□□ -0.09
SF3B3-208ENST00000567250 ZBTB21Q9ULJ3 1066 aa14.47□□□□□ -0.09
SF3B3-208ENST00000567250 MANSC4A6NHS7 340 aaPredicted RBP14.46□□□□□ -0.09
SF3B3-208ENST00000567250 USP17L5A8MUK1 530 aa14.46□□□□□ -0.09
SF3B3-208ENST00000567250 MPHOSPH10O00566 681 aaKnown RBP14.46□□□□□ -0.09
SF3B3-208ENST00000567250 FGAP02671 866 aa14.46□□□□□ -0.09
SF3B3-208ENST00000567250 SLURP2P0DP57 97 aa14.46□□□□□ -0.09
SF3B3-208ENST00000567250 PTPRAP18433 802 aa14.46□□□□□ -0.09
SF3B3-208ENST00000567250 CDK8P49336 464 aa14.46□□□□□ -0.09
SF3B3-208ENST00000567250 NT5C2P49902 561 aa14.46□□□□□ -0.09
SF3B3-208ENST00000567250 GTF2A2P52657 109 aa14.46□□□□□ -0.09
SF3B3-208ENST00000567250 IMMTQ16891 758 aaKnown RBP14.46□□□□□ -0.09
SF3B3-208ENST00000567250 TMEM179Q6ZVK1 233 aa14.46□□□□□ -0.09
SF3B3-208ENST00000567250 DNAJC5GQ8N7S2 189 aa14.46□□□□□ -0.09
SF3B3-208ENST00000567250 RNF41Q9H4P4 317 aaPredicted RBP14.46□□□□□ -0.09
SF3B3-208ENST00000567250 GTF3C3Q9Y5Q9 886 aa14.46□□□□□ -0.09
SF3B3-208ENST00000567250 MYH4Q9Y623 1939 aa14.46□□□□□ -0.09
SF3B3-208ENST00000567250 ZNF213O14771 459 aa14.45□□□□□ -0.1
SF3B3-208ENST00000567250 AOC2O75106 756 aa14.45□□□□□ -0.1
SF3B3-208ENST00000567250 INHBEP58166 350 aa14.45□□□□□ -0.1
SF3B3-208ENST00000567250 MAP2K1Q02750 393 aaPredicted RBP14.45□□□□□ -0.1
SF3B3-208ENST00000567250 MKRN3Q13064 507 aaKnown RBP14.45□□□□□ -0.1
SF3B3-208ENST00000567250 SNAPC2Q13487 334 aa14.45□□□□□ -0.1
SF3B3-208ENST00000567250 SLC44A5Q8NCS7 719 aa14.45□□□□□ -0.1
SF3B3-208ENST00000567250 IL25Q9H293 177 aa14.45□□□□□ -0.1
SF3B3-208ENST00000567250 EIF5BO60841 1220 aaKnown RBP14.44□□□□□ -0.1
SF3B3-208ENST00000567250 CAPN15O75808 1086 aa14.44□□□□□ -0.1
SF3B3-208ENST00000567250 GH2P01242 217 aa14.44□□□□□ -0.1
SF3B3-208ENST00000567250 CETPP11597 493 aa14.44□□□□□ -0.1
SF3B3-208ENST00000567250 KIF23Q02241 960 aaPredicted RBP14.44□□□□□ -0.1
SF3B3-208ENST00000567250 EVX2Q03828 476 aa14.44□□□□□ -0.1
SF3B3-208ENST00000567250 ZNF444Q8N0Y2 327 aaPredicted RBP14.44□□□□□ -0.1
SF3B3-208ENST00000567250 BEGAINQ9BUH8 593 aa14.44□□□□□ -0.1
SF3B3-208ENST00000567250 ANO2Q9NQ90 1003 aa14.44□□□□□ -0.1
SF3B3-208ENST00000567250 ZHX2Q9Y6X8 837 aa14.44□□□□□ -0.1
SF3B3-208ENST00000567250 PLIN4Q96Q06 1357 aa14.44□□□□□ -0.1
SF3B3-208ENST00000567250 CXCL11O14625 94 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 IRF6O14896 467 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 REC8O95072 547 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 TSPY3P0CV98 308 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 TSPY8P0CW00 308 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 RASA1P20936 1047 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 GJA5P36382 358 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 RRP1BQ14684 758 aaKnown RBP14.43□□□□□ -0.1
SF3B3-208ENST00000567250 RAB3GAP1Q15042 981 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 PPP4R3BQ5MIZ7 849 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 OTUD7BQ6GQQ9 843 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 STK11IPQ8N1F8 1099 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 JMYQ8N9B5 988 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 ZNF280CQ8ND82 737 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 WDR18Q9BV38 432 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 SH2D4AQ9H788 454 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 TOMM22Q9NS69 142 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 KCNH4Q9UQ05 1017 aa14.43□□□□□ -0.1
SF3B3-208ENST00000567250 CCL15-CCL14A0A0B4J2E2 113 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 TSPY2A6NKD2 308 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 ORC4O43929 436 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 ALDH1A1P00352 501 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 AKR1B1P15121 316 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 HAND2P61296 217 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 ICA1Q05084 483 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 CTDSPL2Q05D32 466 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 CCL15Q16663 113 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 AKNAD1Q5T1N1 836 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 MFSD6Q6ZSS7 791 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 STAG1Q8WVM7 1258 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 FEZ1Q99689 392 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 ARHGEF10LQ9HCE6 1279 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.42□□□□□ -0.1
SF3B3-208ENST00000567250 AFG3L2Q9Y4W6 797 aa14.42□□□□□ -0.1
SF3B3-208ENST00000567250 A0A0G2JLL6 359 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms