RNA–Protein interactions for RNA: ENST00000566827.5

CDH11-212, Transcript of cadherin 11, humanhuman

TSL 2 BASIC

Gene CDH11, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-212ENST00000566827 PBXIP1Q96AQ6 731 aa13.12□□□□□ -0.31
CDH11-212ENST00000566827 CHMP4CQ96CF2 233 aa13.12□□□□□ -0.31
CDH11-212ENST00000566827 DYNLL2Q96FJ2 89 aa13.12□□□□□ -0.31
CDH11-212ENST00000566827 MRIQ9BWK5 157 aa13.12□□□□□ -0.31
CDH11-212ENST00000566827 OSBPL5Q9H0X9 879 aaPredicted RBP13.12□□□□□ -0.31
CDH11-212ENST00000566827 ATRNL1Q5VV63 1379 aa13.11□□□□□ -0.31
CDH11-212ENST00000566827 CASP8AP2Q9UKL3 1982 aa13.11□□□□□ -0.31
CDH11-212ENST00000566827 FOXP2O15409 715 aa13.11□□□□□ -0.31
CDH11-212ENST00000566827 GDF11O95390 407 aa13.11□□□□□ -0.31
CDH11-212ENST00000566827 RGMBQ6NW40 437 aa13.11□□□□□ -0.31
CDH11-212ENST00000566827 MICAL1Q8TDZ2 1067 aa13.11□□□□□ -0.31
CDH11-212ENST00000566827 FAM151AQ8WW52 585 aa13.11□□□□□ -0.31
CDH11-212ENST00000566827 OTUD5Q96G74 571 aa13.11□□□□□ -0.31
CDH11-212ENST00000566827 GLRX3O76003 335 aaKnown RBP13.1□□□□□ -0.31
CDH11-212ENST00000566827 TNFAIP1Q13829 316 aa13.1□□□□□ -0.31
CDH11-212ENST00000566827 RASAL3Q86YV0 1011 aa13.1□□□□□ -0.31
CDH11-212ENST00000566827 NKX2-3Q8TAU0 364 aa13.1□□□□□ -0.31
CDH11-212ENST00000566827 GLMNQ92990 594 aa13.1□□□□□ -0.31
CDH11-212ENST00000566827 IDI2Q9BXS1 227 aa13.1□□□□□ -0.31
CDH11-212ENST00000566827 R3HDMLQ9H3Y0 253 aa13.1□□□□□ -0.31
CDH11-212ENST00000566827 RANBP2P49792 3224 aaKnown RBP13.1□□□□□ -0.31
CDH11-212ENST00000566827 TBC1D12O60347 775 aa13.1□□□□□ -0.31
CDH11-212ENST00000566827 USP5P45974 858 aa13.1□□□□□ -0.31
CDH11-212ENST00000566827 FOCADQ5VW36 1801 aa13.1□□□□□ -0.31
CDH11-212ENST00000566827 TTC41PQ6P2S7 1318 aa13.1□□□□□ -0.31
CDH11-212ENST00000566827 ZNF16P17020 682 aaPredicted RBP13.09□□□□□ -0.31
CDH11-212ENST00000566827 GSTO1P78417 241 aa13.09□□□□□ -0.31
CDH11-212ENST00000566827 KIF23Q02241 960 aaPredicted RBP13.09□□□□□ -0.31
CDH11-212ENST00000566827 GPATCH3Q96I76 525 aa13.09□□□□□ -0.31
CDH11-212ENST00000566827 LARP6Q9BRS8 491 aaKnown RBP13.09□□□□□ -0.31
CDH11-212ENST00000566827 EPB41L4AQ9HCS5 686 aaPredicted RBP13.09□□□□□ -0.31
CDH11-212ENST00000566827 MCM9Q9NXL9 1143 aa13.09□□□□□ -0.31
CDH11-212ENST00000566827 STAP2Q9UGK3 403 aa13.09□□□□□ -0.31
CDH11-212ENST00000566827 PPP1R12BO60237 982 aaPredicted RBP13.09□□□□□ -0.31
CDH11-212ENST00000566827 NF2P35240 595 aa13.09□□□□□ -0.31
CDH11-212ENST00000566827 TTF1Q15361 905 aaPredicted RBP13.09□□□□□ -0.31
CDH11-212ENST00000566827 FAM83AQ86UY5 434 aa13.09□□□□□ -0.31
CDH11-212ENST00000566827 EXOC8Q8IYI6 725 aa13.09□□□□□ -0.31
CDH11-212ENST00000566827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDH11-212ENST00000566827 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
CDH11-212ENST00000566827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDH11-212ENST00000566827 DCP1AQ9NPI6 582 aaPredicted RBP13.09□□□□□ -0.31
CDH11-212ENST00000566827 SNCAIPQ9Y6H5 919 aa13.09□□□□□ -0.31
CDH11-212ENST00000566827 PAPPA2Q9BXP8 1791 aa13.09□□□□□ -0.31
CDH11-212ENST00000566827 LAMA3Q16787 3333 aa13.08□□□□□ -0.31
CDH11-212ENST00000566827 PHF20L1A8MW92 1017 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 IRF6O14896 467 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 GPAA1O43292 621 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 PEX10O60683 326 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 LDHCP07864 332 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 TNNI2P48788 182 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 LDLRAD1Q5T700 205 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 CWC27Q6UX04 472 aaKnown RBP13.08□□□□□ -0.32
CDH11-212ENST00000566827 OPTNQ96CV9 577 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 RNF113AO15541 343 aaKnown RBP13.08□□□□□ -0.32
CDH11-212ENST00000566827 BAG3O95817 575 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 SDSP20132 328 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 FOSBP53539 338 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 PPP4CP60510 307 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 NMIQ13287 307 aaPredicted RBP13.08□□□□□ -0.32
CDH11-212ENST00000566827 SUPT20HL1Q3ZLR7 823 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 AIDAQ96BJ3 306 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 SLC4A4Q9Y6R1 1079 aa13.08□□□□□ -0.32
CDH11-212ENST00000566827 USP17L12C9JPN9 530 aa13.07□□□□□ -0.32
CDH11-212ENST00000566827 USP17L21D6R901 530 aa13.07□□□□□ -0.32
CDH11-212ENST00000566827 ERC2O15083 957 aa13.07□□□□□ -0.32
CDH11-212ENST00000566827 PRDM1O75626 825 aa13.07□□□□□ -0.32
CDH11-212ENST00000566827 SLF2Q8IX21 1173 aa13.07□□□□□ -0.32
CDH11-212ENST00000566827 PROCA1Q8NCQ7 364 aaPredicted RBP13.07□□□□□ -0.32
CDH11-212ENST00000566827 NOL10Q9BSC4 688 aaKnown RBP13.07□□□□□ -0.32
CDH11-212ENST00000566827 FOXN1O15353 648 aa13.07□□□□□ -0.32
CDH11-212ENST00000566827 TRPA1O75762 1119 aa13.07□□□□□ -0.32
CDH11-212ENST00000566827 HSPA1AP0DMV8 641 aaKnown RBP13.07□□□□□ -0.32
CDH11-212ENST00000566827 HSPA1BP0DMV9 641 aaKnown RBP13.07□□□□□ -0.32
CDH11-212ENST00000566827 SLC10A4Q96EP9 437 aa13.07□□□□□ -0.32
CDH11-212ENST00000566827 STRBPQ96SI9 672 aaKnown RBP13.07□□□□□ -0.32
CDH11-212ENST00000566827 PTPN18Q99952 460 aa13.07□□□□□ -0.32
CDH11-212ENST00000566827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDH11-212ENST00000566827 TACC3Q9Y6A5 838 aa13.07□□□□□ -0.32
CDH11-212ENST00000566827 NAV1Q8NEY1 1877 aa13.06□□□□□ -0.32
CDH11-212ENST00000566827 GSG1L2A8MUP6 293 aa13.06□□□□□ -0.32
CDH11-212ENST00000566827 APPP05067 770 aa13.06□□□□□ -0.32
CDH11-212ENST00000566827 PYGBP11216 843 aa13.06□□□□□ -0.32
CDH11-212ENST00000566827 CHRM1P11229 460 aaPredicted RBP13.06□□□□□ -0.32
CDH11-212ENST00000566827 TSR1Q2NL82 804 aaKnown RBP13.06□□□□□ -0.32
CDH11-212ENST00000566827 ARMC9Q7Z3E5 817 aa13.06□□□□□ -0.32
CDH11-212ENST00000566827 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
CDH11-212ENST00000566827 TRIM75PA6NK02 468 aa13.06□□□□□ -0.32
CDH11-212ENST00000566827 MINDY4BA8MYZ0 360 aa13.06□□□□□ -0.32
CDH11-212ENST00000566827 SLC10A3P09131 477 aa13.06□□□□□ -0.32
CDH11-212ENST00000566827 AAMPQ13685 434 aa13.06□□□□□ -0.32
CDH11-212ENST00000566827 COL9A3Q14050 684 aaPredicted RBP13.06□□□□□ -0.32
CDH11-212ENST00000566827 NOM1Q5C9Z4 860 aaKnown RBP13.06□□□□□ -0.32
CDH11-212ENST00000566827 FKBP1CQ5VVH2 108 aa13.06□□□□□ -0.32
CDH11-212ENST00000566827 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.06□□□□□ -0.32
CDH11-212ENST00000566827 IGF2BP3O00425 579 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDH11-212ENST00000566827 ENTPD3O75355 529 aa13.05□□□□□ -0.32
CDH11-212ENST00000566827 CAP1Q01518 475 aa13.05□□□□□ -0.32
CDH11-212ENST00000566827 UBE3CQ15386 1083 aa13.05□□□□□ -0.32
CDH11-212ENST00000566827 ZYXQ15942 572 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms