RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 TTLL12Q14166 644 aaPredicted RBP9.72□□□□□ -0.85
CDH13-208ENST00000566333 ARMC9Q7Z3E5 817 aa9.72□□□□□ -0.85
CDH13-208ENST00000566333 RASAL3Q86YV0 1011 aa9.72□□□□□ -0.85
CDH13-208ENST00000566333 FOXP4Q8IVH2 680 aaPredicted RBP9.72□□□□□ -0.85
CDH13-208ENST00000566333 AMOTL1Q8IY63 956 aa9.72□□□□□ -0.85
CDH13-208ENST00000566333 ANKRD13AQ8IZ07 590 aa9.72□□□□□ -0.85
CDH13-208ENST00000566333 SCYL3Q8IZE3 742 aa9.72□□□□□ -0.85
CDH13-208ENST00000566333 STAG1Q8WVM7 1258 aa9.72□□□□□ -0.85
CDH13-208ENST00000566333 HHIPL1Q96JK4 782 aa9.72□□□□□ -0.85
CDH13-208ENST00000566333 SWAP70Q9UH65 585 aa9.72□□□□□ -0.85
CDH13-208ENST00000566333 ZBTB21Q9ULJ3 1066 aa9.72□□□□□ -0.85
CDH13-208ENST00000566333 ABT1Q9ULW3 272 aaKnown RBP9.72□□□□□ -0.85
CDH13-208ENST00000566333 U3KPZ7 1027 aaPredicted RBP9.72□□□□□ -0.85
CDH13-208ENST00000566333 A0A0G2JMZ2 1700 aa9.72□□□□□ -0.85
CDH13-208ENST00000566333 SPDYE5A6NIY4 337 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 FAM155AB1AL88 458 aaPredicted RBP9.71□□□□□ -0.86
CDH13-208ENST00000566333 ORC4O43929 436 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 CTNND1O60716 968 aaKnown RBP9.71□□□□□ -0.86
CDH13-208ENST00000566333 PRDM1O75626 825 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 SEC24BO95487 1268 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 SLC10A3P09131 477 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 AKR1B1P15121 316 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 CAP2P40123 477 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 MAP3K9P80192 1104 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 COL9A3Q14050 684 aaPredicted RBP9.71□□□□□ -0.86
CDH13-208ENST00000566333 NECTIN1Q15223 517 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 STOX1Q6ZVD7 989 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 CCDC84Q86UT8 332 aaPredicted RBP9.71□□□□□ -0.86
CDH13-208ENST00000566333 STK11IPQ8N1F8 1099 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.71□□□□□ -0.86
CDH13-208ENST00000566333 TRIM34Q9BYJ4 488 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 ELP3Q9H9T3 547 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 INCENPQ9NQS7 918 aa9.71□□□□□ -0.86
CDH13-208ENST00000566333 COL11A1P12107 1806 aaPredicted RBP9.7□□□□□ -0.86
CDH13-208ENST00000566333 IGKV6D-41A0A0C4DH26 115 aa9.7□□□□□ -0.86
CDH13-208ENST00000566333 SLC27A2O14975 620 aa9.7□□□□□ -0.86
CDH13-208ENST00000566333 REC8O95072 547 aa9.7□□□□□ -0.86
CDH13-208ENST00000566333 GH2P01242 217 aa9.7□□□□□ -0.86
CDH13-208ENST00000566333 PTPRAP18433 802 aa9.7□□□□□ -0.86
CDH13-208ENST00000566333 IMMTQ16891 758 aaKnown RBP9.7□□□□□ -0.86
CDH13-208ENST00000566333 CERKLQ49MI3 558 aaPredicted RBP9.7□□□□□ -0.86
CDH13-208ENST00000566333 AKNAD1Q5T1N1 836 aa9.7□□□□□ -0.86
CDH13-208ENST00000566333 RGMBQ6NW40 437 aa9.7□□□□□ -0.86
CDH13-208ENST00000566333 KIAA1211Q6ZU35 1233 aa9.7□□□□□ -0.86
CDH13-208ENST00000566333 CLEC10AQ8IUN9 316 aa9.7□□□□□ -0.86
CDH13-208ENST00000566333 WNK4Q96J92 1243 aa9.7□□□□□ -0.86
CDH13-208ENST00000566333 CTNNA3Q9UI47 895 aa9.7□□□□□ -0.86
CDH13-208ENST00000566333 CSADQ9Y600 493 aa9.7□□□□□ -0.86
CDH13-208ENST00000566333 ZNF213O14771 459 aa9.69□□□□□ -0.86
CDH13-208ENST00000566333 EPB41L2O43491 1005 aaKnown RBP9.69□□□□□ -0.86
CDH13-208ENST00000566333 ASNSP08243 561 aa9.69□□□□□ -0.86
CDH13-208ENST00000566333 ABCB5Q2M3G0 1257 aa9.69□□□□□ -0.86
CDH13-208ENST00000566333 SPRYD7Q5W111 196 aa9.69□□□□□ -0.86
CDH13-208ENST00000566333 CREB3L3Q68CJ9 461 aa9.69□□□□□ -0.86
CDH13-208ENST00000566333 CYP4F22Q6NT55 531 aa9.69□□□□□ -0.86
CDH13-208ENST00000566333 ERO1BQ86YB8 467 aa9.69□□□□□ -0.86
CDH13-208ENST00000566333 KCNB2Q92953 911 aa9.69□□□□□ -0.86
CDH13-208ENST00000566333 OPTNQ96CV9 577 aa9.69□□□□□ -0.86
CDH13-208ENST00000566333 OTUD5Q96G74 571 aa9.69□□□□□ -0.86
CDH13-208ENST00000566333 GINM1Q9NU53 330 aa9.69□□□□□ -0.86
CDH13-208ENST00000566333 IRF6O14896 467 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 SLC3A2P08195 630 aaKnown RBP9.68□□□□□ -0.86
CDH13-208ENST00000566333 ZBTB48P10074 688 aaPredicted RBP9.68□□□□□ -0.86
CDH13-208ENST00000566333 PCP11498 1178 aaKnown RBP9.68□□□□□ -0.86
CDH13-208ENST00000566333 HSPA4P34932 840 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 ZNF157P51786 506 aaPredicted RBP9.68□□□□□ -0.86
CDH13-208ENST00000566333 PDE4BQ07343 736 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 PPIL2Q13356 520 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 SEPT2Q15019 361 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 FAM47AQ5JRC9 791 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 TMEM179Q6ZVK1 233 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 RASEFQ8IZ41 740 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 CAPNS2Q96L46 248 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 CCDC17Q96LX7 622 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 ZIC5Q96T25 663 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 USP26Q9BXU7 913 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 KCNH4Q9UQ05 1017 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 MYH6P13533 1939 aa9.68□□□□□ -0.86
CDH13-208ENST00000566333 B4E1Z4 1266 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 E7EWF7 191 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 MPHOSPH10O00566 681 aaKnown RBP9.67□□□□□ -0.86
CDH13-208ENST00000566333 NMT2O60551 498 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 NOVP48745 357 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 VEGFBP49765 207 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 ANTXR2P58335 489 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 PPATQ06203 517 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 DGKZQ13574 1117 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 MOGSQ13724 837 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 DEFB115Q30KQ5 88 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 MFSD6Q6ZSS7 791 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 SIAH1Q8IUQ4 282 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 MB21D2Q8IYB1 491 aaPredicted RBP9.67□□□□□ -0.86
CDH13-208ENST00000566333 NEDD1Q8NHV4 660 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 CEP95Q96GE4 821 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 MS4A4AQ96JQ5 239 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 WDR18Q9BV38 432 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 RNF41Q9H4P4 317 aaPredicted RBP9.67□□□□□ -0.86
CDH13-208ENST00000566333 MKNK2Q9HBH9 465 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 ZNF287Q9HBT7 754 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 PICK1Q9NRD5 415 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms