RNA–Protein interactions for RNA: ENST00000566225.1

LINC01254-201, Transcript of long intergenic non-protein coding RNA 1254, humanhuman

BASIC

Gene LINC01254, Length 2,908 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01254-201ENST00000566225 IRX3P78415 501 aaPredicted RBP13.63□□□□□ -0.23
LINC01254-201ENST00000566225 RASGRP2Q7LDG7 609 aa13.63□□□□□ -0.23
LINC01254-201ENST00000566225 APTXQ7Z2E3 356 aaKnown RBP13.63□□□□□ -0.23
LINC01254-201ENST00000566225 SLF1Q9BQI6 1058 aa13.63□□□□□ -0.23
LINC01254-201ENST00000566225 TOMM22Q9NS69 142 aa13.63□□□□□ -0.23
LINC01254-201ENST00000566225 IFIT3O14879 490 aaKnown RBP13.63□□□□□ -0.23
LINC01254-201ENST00000566225 GYPCP04921 128 aa13.63□□□□□ -0.23
LINC01254-201ENST00000566225 RRP12Q5JTH9 1297 aaKnown RBP13.63□□□□□ -0.23
LINC01254-201ENST00000566225 FAM71BQ8TC56 605 aa13.63□□□□□ -0.23
LINC01254-201ENST00000566225 ZKSCAN3Q9BRR0 538 aa13.63□□□□□ -0.23
LINC01254-201ENST00000566225 ADD3Q9UEY8 706 aaKnown RBP13.63□□□□□ -0.23
LINC01254-201ENST00000566225 SYNRGQ9UMZ2 1314 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 ENC1O14682 589 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 ACTN4O43707 911 aaKnown RBP13.62□□□□□ -0.23
LINC01254-201ENST00000566225 FILIP1LQ4L180 1135 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 NT5DC1Q5TFE4 455 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 SPATA1Q5VX52 437 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 IFNL2Q8IZJ0 200 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 RIN2Q8WYP3 895 aaPredicted RBP13.62□□□□□ -0.23
LINC01254-201ENST00000566225 NAA15Q9BXJ9 866 aaKnown RBP13.62□□□□□ -0.23
LINC01254-201ENST00000566225 GBP3Q9H0R5 595 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 TRIM10Q9UDY6 481 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 RNF40O75150 1001 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 ZMYND10O75800 440 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 MAGEA9P43362 315 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 OXER1Q8TDS5 423 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 IGDCC4Q8TDY8 1250 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 EPSTI1Q96J88 318 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 LY9Q9HBG7 655 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 CABP5Q9NP86 173 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 GUCA1BQ9UMX6 200 aa13.62□□□□□ -0.23
LINC01254-201ENST00000566225 MMP1P03956 469 aa13.61□□□□□ -0.23
LINC01254-201ENST00000566225 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
LINC01254-201ENST00000566225 ERVK-24P63145 666 aa13.61□□□□□ -0.23
LINC01254-201ENST00000566225 PIP4K2BP78356 416 aa13.61□□□□□ -0.23
LINC01254-201ENST00000566225 NUP88Q99567 741 aaPredicted RBP13.61□□□□□ -0.23
LINC01254-201ENST00000566225 HINFPQ9BQA5 517 aa13.61□□□□□ -0.23
LINC01254-201ENST00000566225 VPS16Q9H269 839 aa13.61□□□□□ -0.23
LINC01254-201ENST00000566225 RNF225M0QZC1 329 aaPredicted RBP13.61□□□□□ -0.23
LINC01254-201ENST00000566225 CTDSPL2Q05D32 466 aa13.61□□□□□ -0.23
LINC01254-201ENST00000566225 ICE2Q659A1 982 aa13.61□□□□□ -0.23
LINC01254-201ENST00000566225 TRIML1Q8N9V2 468 aa13.61□□□□□ -0.23
LINC01254-201ENST00000566225 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC01254-201ENST00000566225 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC01254-201ENST00000566225 HDAC6Q9UBN7 1215 aa13.61□□□□□ -0.23
LINC01254-201ENST00000566225 WWC3Q9ULE0 1092 aa13.61□□□□□ -0.23
LINC01254-201ENST00000566225 MYO6Q9UM54 1294 aa13.61□□□□□ -0.23
LINC01254-201ENST00000566225 TTF2Q9UNY4 1162 aaKnown RBP13.61□□□□□ -0.23
LINC01254-201ENST00000566225 A0A087X0B3 334 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 N4BP3O15049 544 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 CIAO1O76071 339 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 MCAMP43121 646 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 WHAMMP3Q1A5X7 153 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 TICAM2Q86XR7 235 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 CNGA4Q8IV77 575 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 ACBD3Q9H3P7 528 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 RABEP2Q9H5N1 569 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 TFR2Q9UP52 801 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 WDR19Q8NEZ3 1342 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 FAM205CA6NFA0 338 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 CYP27B1O15528 508 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 NUP133Q8WUM0 1156 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 CAPZA3Q96KX2 299 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 DRC1Q96MC2 740 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 ZSWIM5Q9P217 1185 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 MKRN1Q9UHC7 482 aaKnown RBP13.6□□□□□ -0.23
LINC01254-201ENST00000566225 CTNND2Q9UQB3 1225 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 JRKLQ9Y4A0 524 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 SRGAP2O75044 1071 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 ARHGAP25P42331 645 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 RILPL1Q5EBL4 403 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 GSPT2Q8IYD1 628 aaKnown RBP13.6□□□□□ -0.23
LINC01254-201ENST00000566225 CCDC148Q8NFR7 591 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 TMEM87BQ96K49 555 aa13.6□□□□□ -0.23
LINC01254-201ENST00000566225 FMNL1O95466 1100 aaPredicted RBP13.59□□□□□ -0.23
LINC01254-201ENST00000566225 ADD2P35612 726 aa13.59□□□□□ -0.23
LINC01254-201ENST00000566225 PBX1P40424 430 aa13.59□□□□□ -0.23
LINC01254-201ENST00000566225 KANK3Q6NY19 840 aa13.59□□□□□ -0.23
LINC01254-201ENST00000566225 TRIM22Q8IYM9 498 aa13.59□□□□□ -0.23
LINC01254-201ENST00000566225 AFAP1L1Q8TED9 768 aa13.59□□□□□ -0.23
LINC01254-201ENST00000566225 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
LINC01254-201ENST00000566225 TAB2Q9NYJ8 693 aa13.59□□□□□ -0.23
LINC01254-201ENST00000566225 SRPRBQ9Y5M8 271 aaKnown RBP13.59□□□□□ -0.23
LINC01254-201ENST00000566225 RPS6KA5O75582 802 aa13.59□□□□□ -0.23
LINC01254-201ENST00000566225 TUBB2AQ13885 445 aa13.59□□□□□ -0.23
LINC01254-201ENST00000566225 METTL24Q5JXM2 366 aa13.59□□□□□ -0.23
LINC01254-201ENST00000566225 ELOA2Q8IYF1 753 aaPredicted RBP13.59□□□□□ -0.23
LINC01254-201ENST00000566225 CHP1Q99653 195 aa13.59□□□□□ -0.23
LINC01254-201ENST00000566225 TUBB2BQ9BVA1 445 aa13.59□□□□□ -0.23
LINC01254-201ENST00000566225 PIH1D3Q9NQM4 214 aaKnown RBP13.59□□□□□ -0.23
LINC01254-201ENST00000566225 ZNF532Q9HCE3 1301 aa13.59□□□□□ -0.23
LINC01254-201ENST00000566225 hCG_1642624A0A1W2PR95 340 aa13.58□□□□□ -0.24
LINC01254-201ENST00000566225 PES1O00541 588 aaKnown RBP13.58□□□□□ -0.24
LINC01254-201ENST00000566225 KRT9P35527 623 aa13.58□□□□□ -0.24
LINC01254-201ENST00000566225 DPYDQ12882 1025 aa13.58□□□□□ -0.24
LINC01254-201ENST00000566225 CUL4BQ13620 913 aa13.58□□□□□ -0.24
LINC01254-201ENST00000566225 CTR9Q6PD62 1173 aa13.58□□□□□ -0.24
LINC01254-201ENST00000566225 TMTC1Q8IUR5 882 aa13.58□□□□□ -0.24
LINC01254-201ENST00000566225 PAGE5Q96GU1 130 aa13.58□□□□□ -0.24
LINC01254-201ENST00000566225 DCAF5Q96JK2 942 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms