RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 RENBPP51606 427 aa12.64□□□□□ -0.39
UBFD1-205ENST00000566136 RNF180Q86T96 592 aa12.64□□□□□ -0.39
UBFD1-205ENST00000566136 CHCHD4Q8N4Q1 142 aa12.64□□□□□ -0.39
UBFD1-205ENST00000566136 MPP4Q96JB8 637 aa12.64□□□□□ -0.39
UBFD1-205ENST00000566136 BTG4Q9NY30 223 aa12.64□□□□□ -0.39
UBFD1-205ENST00000566136 ITSN1Q15811 1721 aa12.64□□□□□ -0.39
UBFD1-205ENST00000566136 ACEP12821 1306 aa12.64□□□□□ -0.39
UBFD1-205ENST00000566136 CPSF1Q10570 1443 aaKnown RBP12.64□□□□□ -0.39
UBFD1-205ENST00000566136 TTC30AQ86WT1 665 aa12.64□□□□□ -0.39
UBFD1-205ENST00000566136 TMEM87BQ96K49 555 aa12.64□□□□□ -0.39
UBFD1-205ENST00000566136 EDC4Q6P2E9 1401 aaKnown RBP12.63□□□□□ -0.39
UBFD1-205ENST00000566136 NWD2Q9ULI1 1742 aa12.63□□□□□ -0.39
UBFD1-205ENST00000566136 GTF2E1P29083 439 aaPredicted RBP12.63□□□□□ -0.39
UBFD1-205ENST00000566136 RRS1Q15050 365 aaKnown RBP12.63□□□□□ -0.39
UBFD1-205ENST00000566136 TBCELQ5QJ74 424 aa12.63□□□□□ -0.39
UBFD1-205ENST00000566136 ALG1LQ6GMV1 187 aa12.63□□□□□ -0.39
UBFD1-205ENST00000566136 SEPT12Q8IYM1 358 aa12.63□□□□□ -0.39
UBFD1-205ENST00000566136 SSH1Q8WYL5 1049 aa12.63□□□□□ -0.39
UBFD1-205ENST00000566136 DOLKQ9UPQ8 538 aa12.63□□□□□ -0.39
UBFD1-205ENST00000566136 ALFQ53S48 1182 aa12.63□□□□□ -0.39
UBFD1-205ENST00000566136 TRIM50Q86XT4 487 aa12.63□□□□□ -0.39
UBFD1-205ENST00000566136 EPS8L3Q8TE67 593 aaKnown RBP12.63□□□□□ -0.39
UBFD1-205ENST00000566136 CHAC2Q8WUX2 184 aa12.63□□□□□ -0.39
UBFD1-205ENST00000566136 TRMT2BQ96GJ1 504 aaKnown RBP12.63□□□□□ -0.39
UBFD1-205ENST00000566136 PHACTR3Q96KR7 559 aa12.63□□□□□ -0.39
UBFD1-205ENST00000566136 UBP1Q9NZI7 540 aa12.63□□□□□ -0.39
UBFD1-205ENST00000566136 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
UBFD1-205ENST00000566136 FAM200BP0CF97 657 aa12.62□□□□□ -0.39
UBFD1-205ENST00000566136 C2orf27AQ580R0 203 aa12.62□□□□□ -0.39
UBFD1-205ENST00000566136 MSL3Q8N5Y2 521 aaKnown RBP12.62□□□□□ -0.39
UBFD1-205ENST00000566136 THUMPD2Q9BTF0 503 aaKnown RBP12.62□□□□□ -0.39
UBFD1-205ENST00000566136 ZNF180Q9UJW8 692 aa12.62□□□□□ -0.39
UBFD1-205ENST00000566136 AKAP2Q9Y2D5 859 aa12.62□□□□□ -0.39
UBFD1-205ENST00000566136 B2RBV5 119 aa12.62□□□□□ -0.39
UBFD1-205ENST00000566136 PRRT4C9JH25 899 aa12.62□□□□□ -0.39
UBFD1-205ENST00000566136 PDPK1O15530 556 aa12.62□□□□□ -0.39
UBFD1-205ENST00000566136 EIF4BP23588 611 aaKnown RBP12.62□□□□□ -0.39
UBFD1-205ENST00000566136 DNM1Q05193 864 aaKnown RBP12.62□□□□□ -0.39
UBFD1-205ENST00000566136 MVPQ14764 893 aaKnown RBP12.62□□□□□ -0.39
UBFD1-205ENST00000566136 KIAA0825Q8IV33 1275 aa12.62□□□□□ -0.39
UBFD1-205ENST00000566136 DZIP1LQ8IYY4 767 aaKnown RBP12.62□□□□□ -0.39
UBFD1-205ENST00000566136 TOPAZ1Q8N9V7 1692 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 BRWD3Q6RI45 1802 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 DDR2Q16832 855 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 MTERF2Q49AM1 385 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 USP33Q8TEY7 942 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 ALKBH8Q96BT7 664 aaKnown RBP12.61□□□□□ -0.39
UBFD1-205ENST00000566136 SELENOOQ9BVL4 669 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 RHOBTB2Q9BYZ6 727 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 PNNQ9H307 717 aaKnown RBP12.61□□□□□ -0.39
UBFD1-205ENST00000566136 PRDM11Q9NQV5 511 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 LRFN2Q9ULH4 789 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 CRYBG1Q9Y4K1 1723 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 ESPNB1AK53 854 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 TRIM27P14373 513 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 CHRNA2Q15822 529 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 SCG3Q8WXD2 468 aaKnown RBP12.61□□□□□ -0.39
UBFD1-205ENST00000566136 COG3Q96JB2 828 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 ADAM33Q9BZ11 813 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 CXorf56Q9H5V9 222 aa12.61□□□□□ -0.39
UBFD1-205ENST00000566136 SRCAPQ6ZRS2 3230 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 NRAPQ86VF7 1730 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 USP31Q70CQ4 1352 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 IL16Q14005 1332 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 A0A0G2JS52 829 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 EIF1AYO14602 144 aaKnown RBP12.6□□□□□ -0.39
UBFD1-205ENST00000566136 NBPF7P0C2Y1 421 aaPredicted RBP12.6□□□□□ -0.39
UBFD1-205ENST00000566136 GLULP15104 373 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
UBFD1-205ENST00000566136 TM4SF20Q53R12 229 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 C1orf53Q5VUE5 145 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 MAGEB6Q8N7X4 407 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 PPHLN1Q8NEY8 458 aaKnown RBP12.6□□□□□ -0.39
UBFD1-205ENST00000566136 COG1Q8WTW3 980 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 KIFC2Q96AC6 838 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 SEC16BQ96JE7 1060 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 SCLT1Q96NL6 688 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 TNKS2Q9H2K2 1166 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 CWC25Q9NXE8 425 aaPredicted RBP12.6□□□□□ -0.39
UBFD1-205ENST00000566136 BOLA1Q9Y3E2 137 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 COL14A1Q05707 1796 aaKnown RBP12.6□□□□□ -0.39
UBFD1-205ENST00000566136 KIAA0232Q92628 1395 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 IL13P35225 146 aa12.6□□□□□ -0.39
UBFD1-205ENST00000566136 TMEM121BQ9BXQ6 578 aaPredicted RBP12.6□□□□□ -0.39
UBFD1-205ENST00000566136 TSR3Q9UJK0 312 aaKnown RBP12.6□□□□□ -0.39
UBFD1-205ENST00000566136 R3HCC1Q9Y3T6 440 aaKnown RBP12.6□□□□□ -0.39
UBFD1-205ENST00000566136 CRKP46108 304 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 IFRD2Q12894 506 aaPredicted RBP12.59□□□□□ -0.39
UBFD1-205ENST00000566136 GRM1Q13255 1194 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 COX20Q5RI15 118 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 SNX32Q86XE0 403 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 ITPRIPQ8IWB1 547 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 NIM1KQ8IY84 436 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 PTCD2Q8WV60 388 aaKnown RBP12.59□□□□□ -0.39
UBFD1-205ENST00000566136 CPLX3Q8WVH0 158 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 RETREG1Q9H6L5 497 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 USP25Q9UHP3 1055 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 CDV3Q9UKY7 258 aaKnown RBP12.59□□□□□ -0.39
UBFD1-205ENST00000566136 TTLL13PA6NNM8 815 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 DNAJB2P25686 324 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms