RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.61■□□□□ 0.25
HERPUD1-210ENST00000565966 TRIM6-TRIM34B2RNG4 842 aa16.6■□□□□ 0.25
HERPUD1-210ENST00000565966 GABPAQ06546 454 aa16.6■□□□□ 0.25
HERPUD1-210ENST00000565966 MOGSQ13724 837 aa16.6■□□□□ 0.25
HERPUD1-210ENST00000565966 CCDC84Q86UT8 332 aaPredicted RBP16.6■□□□□ 0.25
HERPUD1-210ENST00000565966 AMOTL1Q8IY63 956 aa16.6■□□□□ 0.25
HERPUD1-210ENST00000565966 ZNF280CQ8ND82 737 aa16.6■□□□□ 0.25
HERPUD1-210ENST00000565966 TAOK2Q9UL54 1235 aa16.6■□□□□ 0.25
HERPUD1-210ENST00000565966 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
HERPUD1-210ENST00000565966 M0R2C6 588 aa16.59■□□□□ 0.25
HERPUD1-210ENST00000565966 PDHXO00330 501 aa16.59■□□□□ 0.25
HERPUD1-210ENST00000565966 GDF11O95390 407 aa16.59■□□□□ 0.25
HERPUD1-210ENST00000565966 SPP2Q13103 211 aa16.59■□□□□ 0.25
HERPUD1-210ENST00000565966 CERKLQ49MI3 558 aaPredicted RBP16.59■□□□□ 0.25
HERPUD1-210ENST00000565966 ZMYM1Q5SVZ6 1142 aa16.59■□□□□ 0.25
HERPUD1-210ENST00000565966 RILPL2Q969X0 211 aa16.59■□□□□ 0.25
HERPUD1-210ENST00000565966 CCDC136Q96JN2 1154 aa16.59■□□□□ 0.25
HERPUD1-210ENST00000565966 WDR18Q9BV38 432 aa16.59■□□□□ 0.25
HERPUD1-210ENST00000565966 USP17L12C9JPN9 530 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 USP17L21D6R901 530 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 GPAA1O43292 621 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 TLR2O60603 784 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 GNAT2P19087 354 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 SHMT1P34896 483 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 JAG1P78504 1218 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 DGKZQ13574 1117 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 C12orf60Q5U649 245 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 GPAT2Q6NUI2 795 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 GIMAP6Q6P9H5 292 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 GADL1Q6ZQY3 521 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 CTU1Q7Z7A3 348 aaKnown RBP16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 TICAM2Q86XR7 235 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 SEC62Q99442 399 aaKnown RBP16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 ZBTB21Q9ULJ3 1066 aa16.58■□□□□ 0.24
HERPUD1-210ENST00000565966 LOC285556D6RIA3 1793 aa16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 GSG1L2A8MUP6 293 aa16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 GH2P01242 217 aa16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 CYP2D6P10635 497 aa16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 GSPT1P15170 499 aaKnown RBP16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 SP3Q02447 781 aa16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 TTC22Q5TAA0 569 aa16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 IFFO2Q5TF58 517 aa16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 ERICH6BQ5W0A0 696 aa16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 PROCA1Q8NCQ7 364 aaPredicted RBP16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 MCOLN1Q9GZU1 580 aa16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 CABP5Q9NP86 173 aa16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 SWAP70Q9UH65 585 aa16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 SLC45A1Q9Y2W3 748 aa16.57■□□□□ 0.24
HERPUD1-210ENST00000565966 PATL2C9JE40 543 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-210ENST00000565966 BACE1P56817 501 aa16.56■□□□□ 0.24
HERPUD1-210ENST00000565966 EVX2Q03828 476 aa16.56■□□□□ 0.24
HERPUD1-210ENST00000565966 ABCB5Q2M3G0 1257 aa16.56■□□□□ 0.24
HERPUD1-210ENST00000565966 SHROOM1Q2M3G4 852 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-210ENST00000565966 SH3D19Q5HYK7 790 aa16.56■□□□□ 0.24
HERPUD1-210ENST00000565966 CTR9Q6PD62 1173 aa16.56■□□□□ 0.24
HERPUD1-210ENST00000565966 ERO1AQ96HE7 468 aa16.56■□□□□ 0.24
HERPUD1-210ENST00000565966 ARPP21Q9UBL0 812 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-210ENST00000565966 C19orf81C9J6K1 198 aa16.55■□□□□ 0.24
HERPUD1-210ENST00000565966 USP17L10C9JJH3 530 aa16.55■□□□□ 0.24
HERPUD1-210ENST00000565966 APPP05067 770 aa16.55■□□□□ 0.24
HERPUD1-210ENST00000565966 SDSP20132 328 aa16.55■□□□□ 0.24
HERPUD1-210ENST00000565966 HMGCS2P54868 508 aa16.55■□□□□ 0.24
HERPUD1-210ENST00000565966 PKN2Q16513 984 aaKnown RBP16.55■□□□□ 0.24
HERPUD1-210ENST00000565966 SBK1Q52WX2 424 aa16.55■□□□□ 0.24
HERPUD1-210ENST00000565966 DYNLL2Q96FJ2 89 aa16.55■□□□□ 0.24
HERPUD1-210ENST00000565966 FAM227BQ96M60 508 aa16.55■□□□□ 0.24
HERPUD1-210ENST00000565966 PARK7Q99497 189 aaKnown RBP16.55■□□□□ 0.24
HERPUD1-210ENST00000565966 HELLSQ9NRZ9 838 aa16.55■□□□□ 0.24
HERPUD1-210ENST00000565966 AGTPBP1Q9UPW5 1226 aa16.55■□□□□ 0.24
HERPUD1-210ENST00000565966 CYP2D7A0A087X1C5 515 aa16.54■□□□□ 0.24
HERPUD1-210ENST00000565966 A0A0D9SFI3 127 aa16.54■□□□□ 0.24
HERPUD1-210ENST00000565966 NMIQ13287 307 aaPredicted RBP16.54■□□□□ 0.24
HERPUD1-210ENST00000565966 RAB3GAP1Q15042 981 aa16.54■□□□□ 0.24
HERPUD1-210ENST00000565966 C17orf99Q6UX52 265 aa16.54■□□□□ 0.24
HERPUD1-210ENST00000565966 CCDC129Q6ZRS4 1044 aa16.54■□□□□ 0.24
HERPUD1-210ENST00000565966 C16orf86Q6ZW13 317 aa16.54■□□□□ 0.24
HERPUD1-210ENST00000565966 SKAP1Q86WV1 359 aa16.54■□□□□ 0.24
HERPUD1-210ENST00000565966 IFNL3Q8IZI9 196 aa16.54■□□□□ 0.24
HERPUD1-210ENST00000565966 ABHD8Q96I13 439 aa16.54■□□□□ 0.24
HERPUD1-210ENST00000565966 PPP4R2Q9NY27 417 aa16.54■□□□□ 0.24
HERPUD1-210ENST00000565966 MGAMO43451 1857 aa16.54■□□□□ 0.24
HERPUD1-210ENST00000565966 CDK8P49336 464 aa16.53■□□□□ 0.24
HERPUD1-210ENST00000565966 PABPC4Q13310 644 aaKnown RBP eCLIP16.53■□□□□ 0.24
HERPUD1-210ENST00000565966 MTMR2Q13614 643 aa16.53■□□□□ 0.24
HERPUD1-210ENST00000565966 TREML2Q5T2D2 321 aa16.53■□□□□ 0.24
HERPUD1-210ENST00000565966 SLC44A5Q8NCS7 719 aa16.53■□□□□ 0.24
HERPUD1-210ENST00000565966 CD99L2Q8TCZ2 262 aa16.53■□□□□ 0.24
HERPUD1-210ENST00000565966 CCDC17Q96LX7 622 aa16.53■□□□□ 0.24
HERPUD1-210ENST00000565966 NACAP1Q9BZK3 213 aa16.53■□□□□ 0.24
HERPUD1-210ENST00000565966 EPB41L4AQ9HCS5 686 aaPredicted RBP16.53■□□□□ 0.24
HERPUD1-210ENST00000565966 TMOD4Q9NZQ9 345 aa16.53■□□□□ 0.24
HERPUD1-210ENST00000565966 PNMA3Q9UL41 463 aa16.53■□□□□ 0.24
HERPUD1-210ENST00000565966 DOCK3Q8IZD9 2030 aa16.52■□□□□ 0.24
HERPUD1-210ENST00000565966 MINDY4BA8MYZ0 360 aa16.52■□□□□ 0.24
HERPUD1-210ENST00000565966 SMIM22K7EJ46 135 aa16.52■□□□□ 0.24
HERPUD1-210ENST00000565966 MPHOSPH10O00566 681 aaKnown RBP16.52■□□□□ 0.24
HERPUD1-210ENST00000565966 CYP2C8P10632 490 aa16.52■□□□□ 0.24
HERPUD1-210ENST00000565966 TDO2P48775 406 aa16.52■□□□□ 0.24
HERPUD1-210ENST00000565966 ARHGEF6Q15052 776 aa16.52■□□□□ 0.24
HERPUD1-210ENST00000565966 MCMDC2Q4G0Z9 681 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms