RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 LDLRAD1Q5T700 205 aa10.6□□□□□ -0.71
CDH13-207ENST00000565636 INTS3Q68E01 1043 aaKnown RBP10.6□□□□□ -0.71
CDH13-207ENST00000565636 CCDC155Q8N6L0 562 aa10.6□□□□□ -0.71
CDH13-207ENST00000565636 ZNF592Q92610 1267 aa10.6□□□□□ -0.71
CDH13-207ENST00000565636 ZBED3Q96IU2 234 aaPredicted RBP10.6□□□□□ -0.71
CDH13-207ENST00000565636 OCSTAMPQ9BR26 566 aa10.6□□□□□ -0.71
CDH13-207ENST00000565636 MYH16Q9H6N6 1097 aa10.6□□□□□ -0.71
CDH13-207ENST00000565636 HMX1Q9NP08 348 aaPredicted RBP10.6□□□□□ -0.71
CDH13-207ENST00000565636 SPEF2Q9C093 1822 aa10.6□□□□□ -0.71
CDH13-207ENST00000565636 COL4A1P02462 1669 aa10.6□□□□□ -0.71
CDH13-207ENST00000565636 NEURL1BA8MQ27 555 aa10.59□□□□□ -0.71
CDH13-207ENST00000565636 ZBTB48P10074 688 aaPredicted RBP10.59□□□□□ -0.71
CDH13-207ENST00000565636 LINS1Q8NG48 757 aa10.59□□□□□ -0.71
CDH13-207ENST00000565636 EPS8L1Q8TE68 723 aa10.59□□□□□ -0.71
CDH13-207ENST00000565636 AGBL1Q96MI9 1066 aa10.59□□□□□ -0.71
CDH13-207ENST00000565636 MPHOSPH8Q99549 860 aa10.59□□□□□ -0.71
CDH13-207ENST00000565636 ZNF804BA4D1E1 1349 aa10.58□□□□□ -0.71
CDH13-207ENST00000565636 MANSC4A6NHS7 340 aaPredicted RBP10.58□□□□□ -0.72
CDH13-207ENST00000565636 GPR25O00155 361 aa10.58□□□□□ -0.72
CDH13-207ENST00000565636 PPP1R12BO60237 982 aaPredicted RBP10.58□□□□□ -0.72
CDH13-207ENST00000565636 ADH1AP07327 375 aa10.58□□□□□ -0.72
CDH13-207ENST00000565636 GCKRQ14397 625 aa10.58□□□□□ -0.72
CDH13-207ENST00000565636 NBPF9Q3BBW0 867 aa10.58□□□□□ -0.72
CDH13-207ENST00000565636 SUPT20HL1Q3ZLR7 823 aa10.58□□□□□ -0.72
CDH13-207ENST00000565636 OTUD7BQ6GQQ9 843 aa10.58□□□□□ -0.72
CDH13-207ENST00000565636 FBXO46Q6PJ61 603 aaPredicted RBP10.58□□□□□ -0.72
CDH13-207ENST00000565636 NANOS1Q8WY41 292 aaKnown RBP10.58□□□□□ -0.72
CDH13-207ENST00000565636 GCC1Q96CN9 775 aa10.58□□□□□ -0.72
CDH13-207ENST00000565636 INSM2Q96T92 566 aaPredicted RBP10.58□□□□□ -0.72
CDH13-207ENST00000565636 GREM2Q9H772 168 aa10.58□□□□□ -0.72
CDH13-207ENST00000565636 RBBP6Q7Z6E9 1792 aaKnown RBP10.57□□□□□ -0.72
CDH13-207ENST00000565636 ELL2O00472 640 aaPredicted RBP10.57□□□□□ -0.72
CDH13-207ENST00000565636 MYO1BO43795 1136 aa10.57□□□□□ -0.72
CDH13-207ENST00000565636 FKTNO75072 461 aa10.57□□□□□ -0.72
CDH13-207ENST00000565636 IL1R1P14778 569 aa10.57□□□□□ -0.72
CDH13-207ENST00000565636 CTSOP43234 321 aaPredicted RBP10.57□□□□□ -0.72
CDH13-207ENST00000565636 DLK2Q6UY11 383 aa10.57□□□□□ -0.72
CDH13-207ENST00000565636 ANKRD18BA2A2Z9 1011 aa10.56□□□□□ -0.72
CDH13-207ENST00000565636 ERVH48-1M5A8F1 160 aa10.56□□□□□ -0.72
CDH13-207ENST00000565636 ITGA6P23229 1130 aa10.56□□□□□ -0.72
CDH13-207ENST00000565636 CASP7P55210 303 aa10.56□□□□□ -0.72
CDH13-207ENST00000565636 ARHGEF6Q15052 776 aa10.56□□□□□ -0.72
CDH13-207ENST00000565636 TWISTNBQ3B726 338 aaPredicted RBP10.56□□□□□ -0.72
CDH13-207ENST00000565636 WDR63Q8IWG1 891 aa10.56□□□□□ -0.72
CDH13-207ENST00000565636 WWC1Q8IX03 1113 aa10.56□□□□□ -0.72
CDH13-207ENST00000565636 ZNF296Q8WUU4 475 aaPredicted RBP10.56□□□□□ -0.72
CDH13-207ENST00000565636 ZNF395Q9H8N7 513 aaPredicted RBP10.56□□□□□ -0.72
CDH13-207ENST00000565636 CD209Q9NNX6 404 aa10.56□□□□□ -0.72
CDH13-207ENST00000565636 TMPRSS4Q9NRS4 437 aa10.56□□□□□ -0.72
CDH13-207ENST00000565636 ASTN2O75129 1339 aaPredicted RBP10.56□□□□□ -0.72
CDH13-207ENST00000565636 KIAA0100Q14667 2235 aaKnown RBP10.56□□□□□ -0.72
CDH13-207ENST00000565636 SLC35F4A4IF30 521 aa10.55□□□□□ -0.72
CDH13-207ENST00000565636 ZBBXA8MT70 800 aa10.55□□□□□ -0.72
CDH13-207ENST00000565636 ESPNB1AK53 854 aa10.55□□□□□ -0.72
CDH13-207ENST00000565636 UBE2Q2LH0YL09 131 aa10.55□□□□□ -0.72
CDH13-207ENST00000565636 SASH1O94885 1247 aa10.55□□□□□ -0.72
CDH13-207ENST00000565636 DLGAP5Q15398 846 aa10.55□□□□□ -0.72
CDH13-207ENST00000565636 SV2AQ7L0J3 742 aa10.55□□□□□ -0.72
CDH13-207ENST00000565636 UBE3BQ7Z3V4 1068 aa10.55□□□□□ -0.72
CDH13-207ENST00000565636 TSPYL6Q8N831 410 aa10.55□□□□□ -0.72
CDH13-207ENST00000565636 DNAAF4Q8WXU2 420 aa10.55□□□□□ -0.72
CDH13-207ENST00000565636 CNTNAP3BQ96NU0 1288 aa10.55□□□□□ -0.72
CDH13-207ENST00000565636 MRIQ9BWK5 157 aa10.55□□□□□ -0.72
CDH13-207ENST00000565636 CNTNAP3Q9BZ76 1288 aa10.55□□□□□ -0.72
CDH13-207ENST00000565636 A0A1B0GUL6 1792 aa10.54□□□□□ -0.72
CDH13-207ENST00000565636 PTGIRP43119 386 aa10.54□□□□□ -0.72
CDH13-207ENST00000565636 PTPN12Q05209 780 aaKnown RBP10.54□□□□□ -0.72
CDH13-207ENST00000565636 CHRNDQ07001 517 aa10.54□□□□□ -0.72
CDH13-207ENST00000565636 FLIIQ13045 1269 aa10.54□□□□□ -0.72
CDH13-207ENST00000565636 IFIT5Q13325 482 aaKnown RBP10.54□□□□□ -0.72
CDH13-207ENST00000565636 TNFAIP1Q13829 316 aa10.54□□□□□ -0.72
CDH13-207ENST00000565636 ZNF804AQ7Z570 1209 aa10.54□□□□□ -0.72
CDH13-207ENST00000565636 DEFB129Q9H1M3 183 aa10.54□□□□□ -0.72
CDH13-207ENST00000565636 IRS2Q9Y4H2 1338 aa10.54□□□□□ -0.72
CDH13-207ENST00000565636 CDC14CA4D256 554 aa10.53□□□□□ -0.72
CDH13-207ENST00000565636 KCNJ4P48050 445 aa10.53□□□□□ -0.72
CDH13-207ENST00000565636 IREB2P48200 963 aaKnown RBP10.53□□□□□ -0.72
CDH13-207ENST00000565636 MCCD1P59942 119 aaPredicted RBP10.53□□□□□ -0.72
CDH13-207ENST00000565636 GTF2IP78347 998 aa10.53□□□□□ -0.72
CDH13-207ENST00000565636 HDLBPQ00341 1268 aaKnown RBP10.53□□□□□ -0.72
CDH13-207ENST00000565636 UBE4AQ14139 1066 aa10.53□□□□□ -0.72
CDH13-207ENST00000565636 CWF19L2Q2TBE0 894 aaKnown RBP10.53□□□□□ -0.72
CDH13-207ENST00000565636 RNF20Q5VTR2 975 aa10.53□□□□□ -0.72
CDH13-207ENST00000565636 TXNRD3Q86VQ6 643 aa10.53□□□□□ -0.72
CDH13-207ENST00000565636 ANKRD13AQ8IZ07 590 aa10.53□□□□□ -0.72
CDH13-207ENST00000565636 RNF217Q8TC41 542 aa10.53□□□□□ -0.72
CDH13-207ENST00000565636 ERO1AQ96HE7 468 aa10.53□□□□□ -0.72
CDH13-207ENST00000565636 COL25A1Q9BXS0 654 aaPredicted RBP10.53□□□□□ -0.72
CDH13-207ENST00000565636 SERPINA10Q9UK55 444 aa10.53□□□□□ -0.72
CDH13-207ENST00000565636 PCDHB9Q9Y5E1 797 aa10.53□□□□□ -0.72
CDH13-207ENST00000565636 FAM205AQ6ZU69 1335 aa10.53□□□□□ -0.72
CDH13-207ENST00000565636 APBB1O00213 710 aa10.52□□□□□ -0.73
CDH13-207ENST00000565636 VAMP4O75379 141 aa10.52□□□□□ -0.73
CDH13-207ENST00000565636 ALDH1L1O75891 902 aa10.52□□□□□ -0.73
CDH13-207ENST00000565636 TBC1D8O95759 1140 aa10.52□□□□□ -0.73
CDH13-207ENST00000565636 FKBP5Q13451 457 aaPredicted RBP10.52□□□□□ -0.73
CDH13-207ENST00000565636 KIAA0825Q8IV33 1275 aa10.52□□□□□ -0.73
CDH13-207ENST00000565636 CCDC85AQ96PX6 553 aaPredicted RBP10.52□□□□□ -0.73
CDH13-207ENST00000565636 ZCCHC17Q9NP64 241 aaKnown RBP10.52□□□□□ -0.73
CDH13-207ENST00000565636 ANGEL1Q9UNK9 670 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms