RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 VPS37CA5D8V6 355 aaPredicted RBP21.64■■□□□ 1.05
EDC3-208ENST00000565602 DDTLA6NHG4 134 aaPredicted RBP21.64■■□□□ 1.05
EDC3-208ENST00000565602 CTDSPL2Q05D32 466 aa21.64■■□□□ 1.05
EDC3-208ENST00000565602 ANGEL2Q5VTE6 544 aaKnown RBP21.64■■□□□ 1.05
EDC3-208ENST00000565602 FAM83AQ86UY5 434 aa21.64■■□□□ 1.05
EDC3-208ENST00000565602 CHMP4CQ96CF2 233 aa21.64■■□□□ 1.05
EDC3-208ENST00000565602 PGAP2Q9UHJ9 254 aa21.64■■□□□ 1.05
EDC3-208ENST00000565602 IQCA1LA6NCM1 817 aa21.63■■□□□ 1.05
EDC3-208ENST00000565602 JAK2O60674 1132 aa21.63■■□□□ 1.05
EDC3-208ENST00000565602 USP50Q70EL3 339 aaPredicted RBP21.63■■□□□ 1.05
EDC3-208ENST00000565602 SMARCC2Q8TAQ2 1214 aa21.63■■□□□ 1.05
EDC3-208ENST00000565602 FAM151AQ8WW52 585 aa21.63■■□□□ 1.05
EDC3-208ENST00000565602 GGA3Q9NZ52 723 aa21.63■■□□□ 1.05
EDC3-208ENST00000565602 NEDD4P46934 1319 aa21.63■■□□□ 1.05
EDC3-208ENST00000565602 PDIA3P30101 505 aaKnown RBP21.62■■□□□ 1.05
EDC3-208ENST00000565602 INCENPQ9NQS7 918 aa21.62■■□□□ 1.05
EDC3-208ENST00000565602 POLR3DP05423 398 aaPredicted RBP21.62■■□□□ 1.05
EDC3-208ENST00000565602 CDAN1Q8IWY9 1227 aa21.62■■□□□ 1.05
EDC3-208ENST00000565602 NKX2-3Q8TAU0 364 aa21.62■■□□□ 1.05
EDC3-208ENST00000565602 NAP1L2Q9ULW6 460 aaPredicted RBP21.62■■□□□ 1.05
EDC3-208ENST00000565602 NSUN7Q8NE18 718 aaKnown RBP21.61■■□□□ 1.05
EDC3-208ENST00000565602 TMEM39BQ9GZU3 492 aa21.61■■□□□ 1.05
EDC3-208ENST00000565602 GPHNQ9NQX3 736 aaPredicted RBP21.61■■□□□ 1.05
EDC3-208ENST00000565602 PITPNM2Q9BZ72 1349 aa21.61■■□□□ 1.05
EDC3-208ENST00000565602 FGRP09769 529 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 HMGN5P82970 282 aaKnown RBP21.6■■□□□ 1.05
EDC3-208ENST00000565602 RASA3Q14644 834 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 FOXD4L6Q3SYB3 417 aaPredicted RBP21.6■■□□□ 1.05
EDC3-208ENST00000565602 FOXD4L3Q6VB84 417 aaPredicted RBP21.6■■□□□ 1.05
EDC3-208ENST00000565602 CDC37L1Q7L3B6 337 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 STAG1Q8WVM7 1258 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 DYNLL2Q96FJ2 89 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 CNNM2Q9H8M5 875 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 KLF18A0A0U1RQI7 1052 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 B4E1Z4 1266 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 SLURP2P0DP57 97 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 CCT2P78371 535 aaKnown RBP21.6■■□□□ 1.05
EDC3-208ENST00000565602 GABPAQ06546 454 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 AKNAD1Q5T1N1 836 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 CYB5R4Q7L1T6 521 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 APOBEC3FQ8IUX4 373 aaKnown RBP21.6■■□□□ 1.05
EDC3-208ENST00000565602 STK11IPQ8N1F8 1099 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 TMEM87AQ8NBN3 555 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 TEPSINQ96N21 525 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 DHX36Q9H2U1 1008 aaKnown RBP21.6■■□□□ 1.05
EDC3-208ENST00000565602 RRAGCQ9HB90 399 aa21.6■■□□□ 1.05
EDC3-208ENST00000565602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.6■■□□□ 1.05
EDC3-208ENST00000565602 PTPDC1A2A3K4 754 aa21.59■■□□□ 1.05
EDC3-208ENST00000565602 MBD3O95983 291 aa21.59■■□□□ 1.05
EDC3-208ENST00000565602 TNFAIP1Q13829 316 aa21.59■■□□□ 1.05
EDC3-208ENST00000565602 TTC6Q86TZ1 520 aa21.59■■□□□ 1.05
EDC3-208ENST00000565602 AMOTL1Q8IY63 956 aa21.59■■□□□ 1.05
EDC3-208ENST00000565602 KRT23Q9C075 422 aa21.59■■□□□ 1.05
EDC3-208ENST00000565602 GOLGA8BA8MQT2 603 aa21.58■■□□□ 1.05
EDC3-208ENST00000565602 SH2B2O14492 632 aaPredicted RBP21.58■■□□□ 1.05
EDC3-208ENST00000565602 CTDNEP1O95476 244 aa21.58■■□□□ 1.05
EDC3-208ENST00000565602 FAM184AQ8NB25 1140 aa21.58■■□□□ 1.05
EDC3-208ENST00000565602 SLC44A5Q8NCS7 719 aa21.58■■□□□ 1.05
EDC3-208ENST00000565602 TMEM87BQ96K49 555 aa21.58■■□□□ 1.05
EDC3-208ENST00000565602 DEFB129Q9H1M3 183 aa21.58■■□□□ 1.05
EDC3-208ENST00000565602 EHD4Q9H223 541 aa21.58■■□□□ 1.05
EDC3-208ENST00000565602 NCOA5Q9HCD5 579 aaKnown RBP21.58■■□□□ 1.05
EDC3-208ENST00000565602 NMRK2Q9NPI5 230 aa21.58■■□□□ 1.05
EDC3-208ENST00000565602 BRPF3Q9ULD4 1205 aa21.58■■□□□ 1.05
EDC3-208ENST00000565602 ANGEL1Q9UNK9 670 aaKnown RBP21.58■■□□□ 1.05
EDC3-208ENST00000565602 KIF3AQ9Y496 699 aa21.58■■□□□ 1.05
EDC3-208ENST00000565602 VEGFAP15692 232 aaPredicted RBP21.58■■□□□ 1.04
EDC3-208ENST00000565602 TNNI2P48788 182 aa21.58■■□□□ 1.04
EDC3-208ENST00000565602 C16orf86Q6ZW13 317 aa21.58■■□□□ 1.04
EDC3-208ENST00000565602 METTL16Q86W50 562 aaKnown RBP21.58■■□□□ 1.04
EDC3-208ENST00000565602 ZSCAN29Q8IWY8 852 aaPredicted RBP21.58■■□□□ 1.04
EDC3-208ENST00000565602 GPT2Q8TD30 523 aa21.58■■□□□ 1.04
EDC3-208ENST00000565602 ZC3H15Q8WU90 426 aaKnown RBP21.58■■□□□ 1.04
EDC3-208ENST00000565602 DNAJC18Q9H819 358 aa21.58■■□□□ 1.04
EDC3-208ENST00000565602 POTEIP0CG38 1075 aa21.57■■□□□ 1.04
EDC3-208ENST00000565602 POTEJP0CG39 1038 aa21.57■■□□□ 1.04
EDC3-208ENST00000565602 MFSD6Q6ZSS7 791 aa21.57■■□□□ 1.04
EDC3-208ENST00000565602 PNMA8AQ86V59 439 aaPredicted RBP21.57■■□□□ 1.04
EDC3-208ENST00000565602 DDX11Q96FC9 970 aa21.57■■□□□ 1.04
EDC3-208ENST00000565602 CSRNP1Q96S65 589 aa21.57■■□□□ 1.04
EDC3-208ENST00000565602 PI4KBQ9UBF8 816 aa21.57■■□□□ 1.04
EDC3-208ENST00000565602 CNPY2Q9Y2B0 182 aa21.57■■□□□ 1.04
EDC3-208ENST00000565602 GREB1LQ9C091 1923 aaPredicted RBP21.56■■□□□ 1.04
EDC3-208ENST00000565602 HLA-DOAP06340 250 aa21.56■■□□□ 1.04
EDC3-208ENST00000565602 NCLP19338 710 aaKnown RBP21.56■■□□□ 1.04
EDC3-208ENST00000565602 EAPPQ56P03 285 aaPredicted RBP21.56■■□□□ 1.04
EDC3-208ENST00000565602 ZNF526Q8TF50 670 aaPredicted RBP21.56■■□□□ 1.04
EDC3-208ENST00000565602 RNF41Q9H4P4 317 aaPredicted RBP21.56■■□□□ 1.04
EDC3-208ENST00000565602 SERPINB13Q9UIV8 391 aa21.56■■□□□ 1.04
EDC3-208ENST00000565602 PRDM1O75626 825 aa21.56■■□□□ 1.04
EDC3-208ENST00000565602 GDPD2Q9HCC8 539 aa21.56■■□□□ 1.04
EDC3-208ENST00000565602 HPS5Q9UPZ3 1129 aa21.56■■□□□ 1.04
EDC3-208ENST00000565602 FSD2A1L4K1 749 aa21.55■■□□□ 1.04
EDC3-208ENST00000565602 ORC4O43929 436 aa21.55■■□□□ 1.04
EDC3-208ENST00000565602 DHX16O60231 1041 aaKnown RBP21.55■■□□□ 1.04
EDC3-208ENST00000565602 PCP11498 1178 aaKnown RBP21.55■■□□□ 1.04
EDC3-208ENST00000565602 CDK8P49336 464 aa21.55■■□□□ 1.04
EDC3-208ENST00000565602 CAVIN1Q6NZI2 390 aaKnown RBP21.55■■□□□ 1.04
EDC3-208ENST00000565602 USP48Q86UV5 1035 aa21.55■■□□□ 1.04
EDC3-208ENST00000565602 SSC5DA1L4H1 1573 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms