RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 IRX3P78415 501 aaPredicted RBP13.96□□□□□ -0.17
CAPN3-215ENST00000565559 MRPS5P82675 430 aaKnown RBP13.96□□□□□ -0.17
CAPN3-215ENST00000565559 GRIN2CQ14957 1233 aa13.96□□□□□ -0.17
CAPN3-215ENST00000565559 DIXDC1Q155Q3 683 aa13.96□□□□□ -0.17
CAPN3-215ENST00000565559 TWISTNBQ3B726 338 aaPredicted RBP13.96□□□□□ -0.17
CAPN3-215ENST00000565559 ZFPM1Q8IX07 1006 aa13.96□□□□□ -0.17
CAPN3-215ENST00000565559 GPRC5AQ8NFJ5 357 aa13.96□□□□□ -0.17
CAPN3-215ENST00000565559 BADQ92934 168 aa13.96□□□□□ -0.17
CAPN3-215ENST00000565559 FAM163AQ96GL9 167 aaPredicted RBP13.96□□□□□ -0.17
CAPN3-215ENST00000565559 RNPC3Q96LT9 517 aaKnown RBP13.96□□□□□ -0.17
CAPN3-215ENST00000565559 TBC1D2Q9BYX2 928 aa13.96□□□□□ -0.17
CAPN3-215ENST00000565559 TSHZ2Q9NRE2 1034 aa13.96□□□□□ -0.17
CAPN3-215ENST00000565559 BDP1A6H8Y1 2624 aa13.95□□□□□ -0.18
CAPN3-215ENST00000565559 GRM8O00222 908 aa13.95□□□□□ -0.18
CAPN3-215ENST00000565559 DNM1LO00429 736 aa13.95□□□□□ -0.18
CAPN3-215ENST00000565559 MAPK4P31152 587 aa13.95□□□□□ -0.18
CAPN3-215ENST00000565559 RGS3P49796 1198 aa13.95□□□□□ -0.18
CAPN3-215ENST00000565559 HMGCS2P54868 508 aa13.95□□□□□ -0.18
CAPN3-215ENST00000565559 SPP2Q13103 211 aa13.95□□□□□ -0.18
CAPN3-215ENST00000565559 CCDC84Q86UT8 332 aaPredicted RBP13.95□□□□□ -0.18
CAPN3-215ENST00000565559 ZNF280CQ8ND82 737 aa13.95□□□□□ -0.18
CAPN3-215ENST00000565559 PPM1EQ8WY54 764 aa13.95□□□□□ -0.18
CAPN3-215ENST00000565559 GAS2L1Q99501 681 aaPredicted RBP13.95□□□□□ -0.18
CAPN3-215ENST00000565559 APBA2Q99767 749 aa13.95□□□□□ -0.18
CAPN3-215ENST00000565559 CWC22Q9HCG8 908 aaKnown RBP13.95□□□□□ -0.18
CAPN3-215ENST00000565559 C9orf78Q9NZ63 289 aaPredicted RBP13.95□□□□□ -0.18
CAPN3-215ENST00000565559 NCOR1O75376 2440 aa13.94□□□□□ -0.18
CAPN3-215ENST00000565559 IFIT1P09914 478 aaKnown RBP13.94□□□□□ -0.18
CAPN3-215ENST00000565559 MAP3K10Q02779 954 aa13.94□□□□□ -0.18
CAPN3-215ENST00000565559 MFSD14CQ5VZR4 134 aa13.94□□□□□ -0.18
CAPN3-215ENST00000565559 LPAR1Q92633 364 aa13.94□□□□□ -0.18
CAPN3-215ENST00000565559 IDI2Q9BXS1 227 aa13.94□□□□□ -0.18
CAPN3-215ENST00000565559 GPHNQ9NQX3 736 aaPredicted RBP13.94□□□□□ -0.18
CAPN3-215ENST00000565559 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.94□□□□□ -0.18
CAPN3-215ENST00000565559 MAST2Q6P0Q8 1798 aa13.94□□□□□ -0.18
CAPN3-215ENST00000565559 KIF16BQ96L93 1317 aa13.93□□□□□ -0.18
CAPN3-215ENST00000565559 APAF1O14727 1248 aa13.93□□□□□ -0.18
CAPN3-215ENST00000565559 PDE8BO95263 885 aa13.93□□□□□ -0.18
CAPN3-215ENST00000565559 LDHBP07195 334 aaKnown RBP13.93□□□□□ -0.18
CAPN3-215ENST00000565559 CCL14Q16627 93 aa13.93□□□□□ -0.18
CAPN3-215ENST00000565559 BEND3Q5T5X7 828 aa13.93□□□□□ -0.18
CAPN3-215ENST00000565559 TSR2Q969E8 191 aaKnown RBP13.93□□□□□ -0.18
CAPN3-215ENST00000565559 DDX20Q9UHI6 824 aaKnown RBP13.93□□□□□ -0.18
CAPN3-215ENST00000565559 PIEZO1Q92508 2521 aa13.93□□□□□ -0.18
CAPN3-215ENST00000565559 DNAJB2P25686 324 aa13.92□□□□□ -0.18
CAPN3-215ENST00000565559 CNGA1P29973 690 aa13.92□□□□□ -0.18
CAPN3-215ENST00000565559 PUM3Q15397 648 aaKnown RBP13.92□□□□□ -0.18
CAPN3-215ENST00000565559 LARP6Q9BRS8 491 aaKnown RBP13.92□□□□□ -0.18
CAPN3-215ENST00000565559 ZNF576Q9H609 170 aa13.92□□□□□ -0.18
CAPN3-215ENST00000565559 AS3MTQ9HBK9 375 aa13.92□□□□□ -0.18
CAPN3-215ENST00000565559 PTPRFP10586 1907 aa13.92□□□□□ -0.18
CAPN3-215ENST00000565559 DOCK1Q14185 1865 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 KBTBD13C9JR72 458 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 GLRX3O76003 335 aaKnown RBP13.91□□□□□ -0.18
CAPN3-215ENST00000565559 PDE4AP27815 886 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 PRDX5P30044 214 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 CCDC184Q52MB2 194 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 AKNAD1Q5T1N1 836 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 SLC39A5Q6ZMH5 540 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 SH3BP5LQ7L8J4 393 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 GPR142Q7Z601 462 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 PLEKHH3Q7Z736 793 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 ARRDC4Q8NCT1 418 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 USP6NLQ92738 828 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 OSBPL5Q9H0X9 879 aaPredicted RBP13.91□□□□□ -0.18
CAPN3-215ENST00000565559 TMOD4Q9NZQ9 345 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 LTBP2Q14767 1821 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 DOCK2Q92608 1830 aa13.91□□□□□ -0.18
CAPN3-215ENST00000565559 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.9□□□□□ -0.18
CAPN3-215ENST00000565559 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.9□□□□□ -0.18
CAPN3-215ENST00000565559 DDTLA6NHG4 134 aaPredicted RBP13.9□□□□□ -0.18
CAPN3-215ENST00000565559 USP17L5A8MUK1 530 aa13.9□□□□□ -0.18
CAPN3-215ENST00000565559 TBC1D12O60347 775 aa13.9□□□□□ -0.18
CAPN3-215ENST00000565559 PICALMQ13492 652 aa13.9□□□□□ -0.18
CAPN3-215ENST00000565559 DSG2Q14126 1118 aa13.9□□□□□ -0.18
CAPN3-215ENST00000565559 SH3D19Q5HYK7 790 aa13.9□□□□□ -0.18
CAPN3-215ENST00000565559 MORN1Q5T089 497 aa13.9□□□□□ -0.18
CAPN3-215ENST00000565559 GTF3C2Q8WUA4 911 aaPredicted RBP13.9□□□□□ -0.18
CAPN3-215ENST00000565559 TIFAQ96CG3 184 aa13.9□□□□□ -0.18
CAPN3-215ENST00000565559 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.9□□□□□ -0.18
CAPN3-215ENST00000565559 MRS2Q9HD23 443 aa13.9□□□□□ -0.18
CAPN3-215ENST00000565559 PDLIM7Q9NR12 457 aa13.9□□□□□ -0.18
CAPN3-215ENST00000565559 UTYO14607 1347 aa13.9□□□□□ -0.19
CAPN3-215ENST00000565559 F6X3S4 739 aa13.89□□□□□ -0.19
CAPN3-215ENST00000565559 SLC5A1P13866 664 aa13.89□□□□□ -0.19
CAPN3-215ENST00000565559 HOXB3P14651 431 aaPredicted RBP13.89□□□□□ -0.19
CAPN3-215ENST00000565559 HERVK_113P62684 666 aa13.89□□□□□ -0.19
CAPN3-215ENST00000565559 MAP2K5Q13163 448 aa13.89□□□□□ -0.19
CAPN3-215ENST00000565559 TRIM60Q495X7 471 aa13.89□□□□□ -0.19
CAPN3-215ENST00000565559 LRRC24Q50LG9 513 aa13.89□□□□□ -0.19
CAPN3-215ENST00000565559 VGLL2Q8N8G2 317 aa13.89□□□□□ -0.19
CAPN3-215ENST00000565559 EDC3Q96F86 508 aaKnown RBP13.89□□□□□ -0.19
CAPN3-215ENST00000565559 P2RX7Q99572 595 aaKnown RBP13.89□□□□□ -0.19
CAPN3-215ENST00000565559 TXNRD2Q9NNW7 524 aa13.89□□□□□ -0.19
CAPN3-215ENST00000565559 GNL3LQ9NVN8 582 aaKnown RBP13.89□□□□□ -0.19
CAPN3-215ENST00000565559 PLXNB2O15031 1838 aa13.89□□□□□ -0.19
CAPN3-215ENST00000565559 LOC285556D6RIA3 1793 aa13.88□□□□□ -0.19
CAPN3-215ENST00000565559 DNAH12Q6ZR08 3092 aa13.88□□□□□ -0.19
CAPN3-215ENST00000565559 SNPHO15079 494 aa13.88□□□□□ -0.19
CAPN3-215ENST00000565559 SLURP2P0DP57 97 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms