RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 TOB2Q14106 344 aaPredicted RBP22.48■■□□□ 1.19
CSPG4P13-201ENST00000565545 CFAP100Q494V2 611 aa22.48■■□□□ 1.19
CSPG4P13-201ENST00000565545 MTMR14Q8NCE2 650 aa22.48■■□□□ 1.19
CSPG4P13-201ENST00000565545 INTS4Q96HW7 963 aaKnown RBP22.48■■□□□ 1.19
CSPG4P13-201ENST00000565545 TMEM87BQ96K49 555 aa22.48■■□□□ 1.19
CSPG4P13-201ENST00000565545 NEDD4P46934 1319 aa22.48■■□□□ 1.19
CSPG4P13-201ENST00000565545 B4E1Z4 1266 aa22.47■■□□□ 1.19
CSPG4P13-201ENST00000565545 WDHD1O75717 1129 aaPredicted RBP22.47■■□□□ 1.19
CSPG4P13-201ENST00000565545 SLC10A3P09131 477 aa22.47■■□□□ 1.19
CSPG4P13-201ENST00000565545 ZNF280AP59817 542 aaPredicted RBP22.47■■□□□ 1.19
CSPG4P13-201ENST00000565545 ESR2Q92731 530 aa22.47■■□□□ 1.19
CSPG4P13-201ENST00000565545 CSRNP1Q96S65 589 aa22.47■■□□□ 1.19
CSPG4P13-201ENST00000565545 IDI2Q9BXS1 227 aa22.47■■□□□ 1.19
CSPG4P13-201ENST00000565545 ZNF287Q9HBT7 754 aa22.47■■□□□ 1.19
CSPG4P13-201ENST00000565545 TAOK2Q9UL54 1235 aa22.47■■□□□ 1.19
CSPG4P13-201ENST00000565545 COL9A3Q14050 684 aaPredicted RBP22.46■■□□□ 1.19
CSPG4P13-201ENST00000565545 NOL8Q76FK4 1167 aaKnown RBP22.46■■□□□ 1.19
CSPG4P13-201ENST00000565545 TTC6Q86TZ1 520 aa22.46■■□□□ 1.19
CSPG4P13-201ENST00000565545 CHMP4CQ96CF2 233 aa22.46■■□□□ 1.19
CSPG4P13-201ENST00000565545 TCEANC2Q96MN5 208 aa22.46■■□□□ 1.19
CSPG4P13-201ENST00000565545 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.46■■□□□ 1.19
CSPG4P13-201ENST00000565545 CYP2D7A0A087X1C5 515 aa22.45■■□□□ 1.18
CSPG4P13-201ENST00000565545 EVCP57679 992 aa22.45■■□□□ 1.18
CSPG4P13-201ENST00000565545 ANTXR2P58335 489 aa22.45■■□□□ 1.18
CSPG4P13-201ENST00000565545 DLGAP5Q15398 846 aa22.45■■□□□ 1.18
CSPG4P13-201ENST00000565545 REM2Q8IYK8 340 aaPredicted RBP22.45■■□□□ 1.18
CSPG4P13-201ENST00000565545 CWC22Q9HCG8 908 aaKnown RBP22.45■■□□□ 1.18
CSPG4P13-201ENST00000565545 MYOZ2Q9NPC6 264 aa22.45■■□□□ 1.18
CSPG4P13-201ENST00000565545 TOMM22Q9NS69 142 aa22.45■■□□□ 1.18
CSPG4P13-201ENST00000565545 TPCN1Q9ULQ1 816 aa22.45■■□□□ 1.18
CSPG4P13-201ENST00000565545 TACC3Q9Y6A5 838 aa22.45■■□□□ 1.18
CSPG4P13-201ENST00000565545 SPDYE2BA6NHP3 402 aa22.44■■□□□ 1.18
CSPG4P13-201ENST00000565545 KDM4AO75164 1064 aa22.44■■□□□ 1.18
CSPG4P13-201ENST00000565545 SPDYE6P0CI01 402 aa22.44■■□□□ 1.18
CSPG4P13-201ENST00000565545 CYP2D6P10635 497 aa22.44■■□□□ 1.18
CSPG4P13-201ENST00000565545 SART3Q15020 963 aaKnown RBP22.44■■□□□ 1.18
CSPG4P13-201ENST00000565545 CYB5R4Q7L1T6 521 aa22.44■■□□□ 1.18
CSPG4P13-201ENST00000565545 BRF1Q92994 677 aa22.44■■□□□ 1.18
CSPG4P13-201ENST00000565545 OSBPL5Q9H0X9 879 aaPredicted RBP22.44■■□□□ 1.18
CSPG4P13-201ENST00000565545 ZSWIM5Q9P217 1185 aa22.44■■□□□ 1.18
CSPG4P13-201ENST00000565545 FKBP1BP68106 108 aa22.43■■□□□ 1.18
CSPG4P13-201ENST00000565545 RRP12Q5JTH9 1297 aaKnown RBP22.43■■□□□ 1.18
CSPG4P13-201ENST00000565545 ZNF274Q96GC6 653 aaPredicted RBP22.43■■□□□ 1.18
CSPG4P13-201ENST00000565545 PRMT6Q96LA8 375 aaPredicted RBP22.43■■□□□ 1.18
CSPG4P13-201ENST00000565545 DHX36Q9H2U1 1008 aaKnown RBP22.43■■□□□ 1.18
CSPG4P13-201ENST00000565545 INCENPQ9NQS7 918 aa22.43■■□□□ 1.18
CSPG4P13-201ENST00000565545 TMOD2Q9NZR1 351 aa22.43■■□□□ 1.18
CSPG4P13-201ENST00000565545 SAP30BPQ9UHR5 308 aaKnown RBP22.43■■□□□ 1.18
CSPG4P13-201ENST00000565545 ANGEL1Q9UNK9 670 aaKnown RBP22.43■■□□□ 1.18
CSPG4P13-201ENST00000565545 POLR2AP24928 1970 aaKnown RBP22.42■■□□□ 1.18
CSPG4P13-201ENST00000565545 ENTPD3O75355 529 aa22.42■■□□□ 1.18
CSPG4P13-201ENST00000565545 PICALMQ13492 652 aa22.42■■□□□ 1.18
CSPG4P13-201ENST00000565545 ME3Q16798 604 aa22.42■■□□□ 1.18
CSPG4P13-201ENST00000565545 CHST3Q7LGC8 479 aa22.42■■□□□ 1.18
CSPG4P13-201ENST00000565545 RASAL3Q86YV0 1011 aa22.42■■□□□ 1.18
CSPG4P13-201ENST00000565545 TMTC2Q8N394 836 aa22.42■■□□□ 1.18
CSPG4P13-201ENST00000565545 LRRC2Q9BYS8 371 aa22.42■■□□□ 1.18
CSPG4P13-201ENST00000565545 DDX4Q9NQI0 724 aaKnown RBP22.42■■□□□ 1.18
CSPG4P13-201ENST00000565545 CIZ1Q9ULV3 898 aaPredicted RBP22.42■■□□□ 1.18
CSPG4P13-201ENST00000565545 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.42■■□□□ 1.18
CSPG4P13-201ENST00000565545 COL2A1P02458 1487 aaPredicted RBP22.41■■□□□ 1.18
CSPG4P13-201ENST00000565545 SH2B2O14492 632 aaPredicted RBP22.41■■□□□ 1.18
CSPG4P13-201ENST00000565545 HLA-DOAP06340 250 aa22.41■■□□□ 1.18
CSPG4P13-201ENST00000565545 LIFRP42702 1097 aa22.41■■□□□ 1.18
CSPG4P13-201ENST00000565545 SOX10P56693 466 aa22.41■■□□□ 1.18
CSPG4P13-201ENST00000565545 TTLL12Q14166 644 aaPredicted RBP22.41■■□□□ 1.18
CSPG4P13-201ENST00000565545 FKBP1CQ5VVH2 108 aa22.41■■□□□ 1.18
CSPG4P13-201ENST00000565545 C16orf86Q6ZW13 317 aa22.41■■□□□ 1.18
CSPG4P13-201ENST00000565545 SPRYD3Q8NCJ5 442 aa22.41■■□□□ 1.18
CSPG4P13-201ENST00000565545 IGDCC4Q8TDY8 1250 aa22.41■■□□□ 1.18
CSPG4P13-201ENST00000565545 ZBED3Q96IU2 234 aaPredicted RBP22.41■■□□□ 1.18
CSPG4P13-201ENST00000565545 SCAF8Q9UPN6 1271 aaKnown RBP22.41■■□□□ 1.18
CSPG4P13-201ENST00000565545 ERICH2A1L162 156 aa22.4■■□□□ 1.18
CSPG4P13-201ENST00000565545 MYO1BO43795 1136 aa22.4■■□□□ 1.18
CSPG4P13-201ENST00000565545 PLCD1P51178 756 aa22.4■■□□□ 1.18
CSPG4P13-201ENST00000565545 CCDC178Q5BJE1 867 aa22.4■■□□□ 1.18
CSPG4P13-201ENST00000565545 CTU1Q7Z7A3 348 aaKnown RBP22.4■■□□□ 1.18
CSPG4P13-201ENST00000565545 IQCA1Q86XH1 822 aa22.4■■□□□ 1.18
CSPG4P13-201ENST00000565545 LARP6Q9BRS8 491 aaKnown RBP22.4■■□□□ 1.18
CSPG4P13-201ENST00000565545 TDRD3Q9H7E2 651 aaKnown RBP22.4■■□□□ 1.18
CSPG4P13-201ENST00000565545 MKNK2Q9HBH9 465 aa22.4■■□□□ 1.18
CSPG4P13-201ENST00000565545 PCDHAC2Q9Y5I4 1007 aa22.4■■□□□ 1.18
CSPG4P13-201ENST00000565545 PITPNM2Q9BZ72 1349 aa22.39■■□□□ 1.18
CSPG4P13-201ENST00000565545 UBE2Q2LH0YL09 131 aa22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 IFIT3O14879 490 aaKnown RBP22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 RANBP6O60518 1105 aaKnown RBP22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 PFKFB2O60825 505 aa22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 NFIAQ12857 509 aa22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 SPDYE2Q495Y8 402 aa22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 TMEM67Q5HYA8 995 aa22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 MOB2Q70IA6 237 aa22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 SGMS1Q86VZ5 419 aa22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 STK11IPQ8N1F8 1099 aa22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 UBAC1Q9BSL1 405 aa22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 EHD4Q9H223 541 aa22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 SLKQ9H2G2 1235 aaPredicted RBP22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 FAM198AQ9UFP1 575 aa22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 SWAP70Q9UH65 585 aa22.39■■□□□ 1.17
CSPG4P13-201ENST00000565545 SMIM22K7EJ46 135 aa22.38■■□□□ 1.17
CSPG4P13-201ENST00000565545 LARGE1O95461 756 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms