RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 CCNA1P78396 465 aa11.3□□□□□ -0.6
VPS9D1-205ENST00000565452 TLE2Q04725 743 aa11.3□□□□□ -0.6
VPS9D1-205ENST00000565452 SNX17Q15036 470 aa11.3□□□□□ -0.6
VPS9D1-205ENST00000565452 TMEM31Q5JXX7 168 aa11.3□□□□□ -0.6
VPS9D1-205ENST00000565452 SH3RF1Q7Z6J0 888 aa11.3□□□□□ -0.6
VPS9D1-205ENST00000565452 ALYREFQ86V81 257 aaKnown RBP11.3□□□□□ -0.6
VPS9D1-205ENST00000565452 ZGPATQ8N5A5 531 aaKnown RBP11.3□□□□□ -0.6
VPS9D1-205ENST00000565452 FAM163AQ96GL9 167 aaPredicted RBP11.3□□□□□ -0.6
VPS9D1-205ENST00000565452 PAGR1Q9BTK6 254 aa11.3□□□□□ -0.6
VPS9D1-205ENST00000565452 PORCNQ9H237 461 aa11.3□□□□□ -0.6
VPS9D1-205ENST00000565452 DENND2AQ9ULE3 1009 aa11.3□□□□□ -0.6
VPS9D1-205ENST00000565452 AK9Q5TCS8 1911 aa11.29□□□□□ -0.6
VPS9D1-205ENST00000565452 SLC15A5A6NIM6 579 aa11.29□□□□□ -0.6
VPS9D1-205ENST00000565452 NPM3O75607 178 aaKnown RBP11.29□□□□□ -0.6
VPS9D1-205ENST00000565452 MYCNP04198 464 aaPredicted RBP11.29□□□□□ -0.6
VPS9D1-205ENST00000565452 BMP1P13497 986 aa11.29□□□□□ -0.6
VPS9D1-205ENST00000565452 IGFBP4P22692 258 aa11.29□□□□□ -0.6
VPS9D1-205ENST00000565452 ADCYAP1R1P41586 468 aa11.29□□□□□ -0.6
VPS9D1-205ENST00000565452 FPGSQ05932 587 aa11.29□□□□□ -0.6
VPS9D1-205ENST00000565452 CCDC129Q6ZRS4 1044 aa11.29□□□□□ -0.6
VPS9D1-205ENST00000565452 SUCLG2Q96I99 432 aa11.29□□□□□ -0.6
VPS9D1-205ENST00000565452 SRCIN1Q9C0H9 1055 aa11.29□□□□□ -0.6
VPS9D1-205ENST00000565452 PRDM12Q9H4Q4 367 aa11.29□□□□□ -0.6
VPS9D1-205ENST00000565452 SALL1Q9NSC2 1324 aa11.29□□□□□ -0.6
VPS9D1-205ENST00000565452 SEMA3EO15041 775 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 HOXC6P09630 235 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 PTPREP23469 700 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 CYP2C19P33261 490 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 EPHB4P54760 987 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 MTMR2Q13614 643 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 SPTY2D1Q68D10 685 aaPredicted RBP11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 CCDC174Q6PII3 467 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 SLC4A10Q6U841 1118 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 FERMT2Q96AC1 680 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 KAZALD1Q96I82 304 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 SNX27Q96L92 541 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 DDX4Q9NQI0 724 aaKnown RBP11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 FLRT1Q9NZU1 646 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 CXXC1Q9P0U4 656 aaPredicted RBP11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 RABGAP1Q9Y3P9 1069 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 IVNS1ABPQ9Y6Y0 642 aa11.28□□□□□ -0.6
VPS9D1-205ENST00000565452 CDH23Q9H251 3354 aa11.27□□□□□ -0.6
VPS9D1-205ENST00000565452 FAM196BA6NMK8 535 aa11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 USP17L10C9JJH3 530 aa11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 KIAA0355O15063 1070 aa11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 VAMP4O75379 141 aa11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 MAP4K4O95819 1239 aaPredicted RBP11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 ASNSP08243 561 aa11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 CLTBP09497 229 aa11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 BTDP43251 543 aa11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 RABL6Q3YEC7 729 aaPredicted RBP11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 WDR78Q5VTH9 848 aa11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 DZIP1Q86YF9 867 aaKnown RBP11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 BICC1Q9H694 974 aaKnown RBP11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 EPHX3Q9H6B9 360 aa11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 PRKRIP1Q9H875 184 aaPredicted RBP11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 TMEM39AQ9NV64 488 aa11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 GAKO14976 1311 aa11.27□□□□□ -0.61
VPS9D1-205ENST00000565452 ANP32CO43423 234 aa11.26□□□□□ -0.61
VPS9D1-205ENST00000565452 GPR37L1O60883 481 aa11.26□□□□□ -0.61
VPS9D1-205ENST00000565452 NBPF7P0C2Y1 421 aaPredicted RBP11.26□□□□□ -0.61
VPS9D1-205ENST00000565452 ITGB8P26012 769 aa11.26□□□□□ -0.61
VPS9D1-205ENST00000565452 DPP9Q86TI2 863 aa11.26□□□□□ -0.61
VPS9D1-205ENST00000565452 TRPV1Q8NER1 839 aa11.26□□□□□ -0.61
VPS9D1-205ENST00000565452 NECAB3Q96P71 396 aaPredicted RBP11.26□□□□□ -0.61
VPS9D1-205ENST00000565452 HERC5Q9UII4 1024 aaKnown RBP11.26□□□□□ -0.61
VPS9D1-205ENST00000565452 MSRAQ9UJ68 235 aa11.26□□□□□ -0.61
VPS9D1-205ENST00000565452 NDUFB9Q9Y6M9 179 aa11.26□□□□□ -0.61
VPS9D1-205ENST00000565452 GPR75-ASB3A0A0A6YYF3 556 aa11.25□□□□□ -0.61
VPS9D1-205ENST00000565452 EYA2O00167 538 aa11.25□□□□□ -0.61
VPS9D1-205ENST00000565452 SEPT4O43236 478 aa11.25□□□□□ -0.61
VPS9D1-205ENST00000565452 ADGRE1Q14246 886 aa11.25□□□□□ -0.61
VPS9D1-205ENST00000565452 LRRC41Q15345 812 aa11.25□□□□□ -0.61
VPS9D1-205ENST00000565452 KLHDC4Q8TBB5 520 aa11.25□□□□□ -0.61
VPS9D1-205ENST00000565452 PBX4Q9BYU1 374 aa11.25□□□□□ -0.61
VPS9D1-205ENST00000565452 GINM1Q9NU53 330 aa11.25□□□□□ -0.61
VPS9D1-205ENST00000565452 PI4KBQ9UBF8 816 aa11.25□□□□□ -0.61
VPS9D1-205ENST00000565452 ABCF2Q9UG63 623 aa11.25□□□□□ -0.61
VPS9D1-205ENST00000565452 DCDC2CA8MYV0 355 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 USP17L15C9J2P7 530 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 USP17L13C9JLJ4 530 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 USP17L11C9JVI0 530 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 USP17L18D6R9N7 530 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 USP17L22D6RA61 530 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 USP17L17D6RBQ6 530 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 USP17L19D6RCP7 530 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 USP17L20D6RJB6 530 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 STRNO43815 780 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 LDHCP07864 332 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 CYBAP13498 195 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 USP17L24Q0WX57 530 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 GRB14Q14449 540 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 RRP1BQ14684 758 aaKnown RBP11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 RAB30Q15771 203 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 ANO1Q5XXA6 986 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 OLFML2BQ68BL8 750 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 USP17L2Q6R6M4 530 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 SLC44A5Q8NCS7 719 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 NPLOC4Q8TAT6 608 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 SLC5A4Q9NY91 659 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms