RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CTAGE8P0CG41 777 aa23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 SAFBQ15424 915 aaKnown RBP eCLIP23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 NTRK3Q16288 839 aa23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 CTAGE6Q86UF2 777 aa23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 CTAGE4Q8IX94 777 aa23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 IFNL2Q8IZJ0 200 aa23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 MLKLQ8NB16 471 aa23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 NUP88Q99567 741 aaPredicted RBP23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 ZSWIM5Q9P217 1185 aa23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 ERLIN1O75477 346 aa23.28■■□□□ 1.32
MAP1LC3B-206ENST00000564844 PPARDQ03181 441 aa23.28■■□□□ 1.32
MAP1LC3B-206ENST00000564844 MORC3Q14149 939 aa23.28■■□□□ 1.32
MAP1LC3B-206ENST00000564844 METTL24Q5JXM2 366 aa23.28■■□□□ 1.32
MAP1LC3B-206ENST00000564844 ATG3Q9NT62 314 aa23.28■■□□□ 1.32
MAP1LC3B-206ENST00000564844 FBXO2Q9UK22 296 aaPredicted RBP23.28■■□□□ 1.32
MAP1LC3B-206ENST00000564844 MARF1Q9Y4F3 1742 aaKnown RBP23.28■■□□□ 1.32
MAP1LC3B-206ENST00000564844 MRC1P22897 1456 aa23.28■■□□□ 1.32
MAP1LC3B-206ENST00000564844 PRDM1O75626 825 aa23.27■■□□□ 1.32
MAP1LC3B-206ENST00000564844 CEP112Q8N8E3 955 aa23.27■■□□□ 1.32
MAP1LC3B-206ENST00000564844 WWC3Q9ULE0 1092 aa23.27■■□□□ 1.32
MAP1LC3B-206ENST00000564844 PACS2Q86VP3 889 aa23.27■■□□□ 1.32
MAP1LC3B-206ENST00000564844 PIH1D3Q9NQM4 214 aaKnown RBP23.27■■□□□ 1.32
MAP1LC3B-206ENST00000564844 ZNF532Q9HCE3 1301 aa23.27■■□□□ 1.32
MAP1LC3B-206ENST00000564844 EIF3JO75822 258 aaKnown RBP23.27■■□□□ 1.31
MAP1LC3B-206ENST00000564844 CHP1Q99653 195 aa23.27■■□□□ 1.31
MAP1LC3B-206ENST00000564844 TAB2Q9NYJ8 693 aa23.27■■□□□ 1.31
MAP1LC3B-206ENST00000564844 EIF3CLB5ME19 914 aaKnown RBP23.26■■□□□ 1.31
MAP1LC3B-206ENST00000564844 N4BP3O15049 544 aa23.26■■□□□ 1.31
MAP1LC3B-206ENST00000564844 TTC19Q6DKK2 380 aaPredicted RBP23.26■■□□□ 1.31
MAP1LC3B-206ENST00000564844 DRC1Q96MC2 740 aa23.26■■□□□ 1.31
MAP1LC3B-206ENST00000564844 EIF3CQ99613 913 aaKnown RBP23.26■■□□□ 1.31
MAP1LC3B-206ENST00000564844 CTNND2Q9UQB3 1225 aa23.26■■□□□ 1.31
MAP1LC3B-206ENST00000564844 GYPCP04921 128 aa23.26■■□□□ 1.31
MAP1LC3B-206ENST00000564844 NOM1Q5C9Z4 860 aaKnown RBP23.26■■□□□ 1.31
MAP1LC3B-206ENST00000564844 IGDCC4Q8TDY8 1250 aa23.26■■□□□ 1.31
MAP1LC3B-206ENST00000564844 LY9Q9HBG7 655 aa23.26■■□□□ 1.31
MAP1LC3B-206ENST00000564844 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.26■■□□□ 1.31
MAP1LC3B-206ENST00000564844 A0A1B0GTH6 734 aa23.25■■□□□ 1.31
MAP1LC3B-206ENST00000564844 SMIM22K7EJ46 135 aa23.25■■□□□ 1.31
MAP1LC3B-206ENST00000564844 PRKAB2O43741 272 aa23.25■■□□□ 1.31
MAP1LC3B-206ENST00000564844 ERVK-24P63145 666 aa23.25■■□□□ 1.31
MAP1LC3B-206ENST00000564844 LRRC31Q6UY01 552 aa23.25■■□□□ 1.31
MAP1LC3B-206ENST00000564844 SYNRGQ9UMZ2 1314 aa23.25■■□□□ 1.31
MAP1LC3B-206ENST00000564844 DPYDQ12882 1025 aa23.25■■□□□ 1.31
MAP1LC3B-206ENST00000564844 PROSER2Q86WR7 435 aaPredicted RBP23.25■■□□□ 1.31
MAP1LC3B-206ENST00000564844 POLD4Q9HCU8 107 aa23.25■■□□□ 1.31
MAP1LC3B-206ENST00000564844 PLCD1P51178 756 aa23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 AIDAQ96BJ3 306 aa23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 NAPGQ99747 312 aaPredicted RBP23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 TACC3Q9Y6A5 838 aa23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 MFAP3LO75121 409 aa23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 PTPREP23469 700 aa23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 SART3Q15020 963 aaKnown RBP23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 E2F4Q16254 413 aa23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 LDHAL6AQ6ZMR3 332 aa23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 DACH1Q9UI36 760 aa23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 WNT7AO00755 349 aa23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 DNAJC21Q5F1R6 531 aaKnown RBP23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 EARS2Q5JPH6 523 aaKnown RBP23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 ANKLE2Q86XL3 938 aa23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 VPS54Q9P1Q0 977 aa23.24■■□□□ 1.31
MAP1LC3B-206ENST00000564844 ACTN4O43707 911 aaKnown RBP23.23■■□□□ 1.31
MAP1LC3B-206ENST00000564844 RNF40O75150 1001 aa23.23■■□□□ 1.31
MAP1LC3B-206ENST00000564844 ZFYP08048 801 aaPredicted RBP23.23■■□□□ 1.31
MAP1LC3B-206ENST00000564844 GTF2A1P52655 376 aaPredicted RBP23.23■■□□□ 1.31
MAP1LC3B-206ENST00000564844 EHD4Q9H223 541 aa23.23■■□□□ 1.31
MAP1LC3B-206ENST00000564844 ARMT1Q9H993 441 aa23.23■■□□□ 1.31
MAP1LC3B-206ENST00000564844 CPDO75976 1380 aa23.23■■□□□ 1.31
MAP1LC3B-206ENST00000564844 NFAT5O94916 1531 aa23.23■■□□□ 1.31
MAP1LC3B-206ENST00000564844 NOP2P46087 812 aaKnown RBP23.23■■□□□ 1.31
MAP1LC3B-206ENST00000564844 ZNF174Q15697 407 aa23.23■■□□□ 1.31
MAP1LC3B-206ENST00000564844 APTXQ7Z2E3 356 aaKnown RBP23.22■■□□□ 1.31
MAP1LC3B-206ENST00000564844 FBXL16Q8N461 479 aa23.22■■□□□ 1.31
MAP1LC3B-206ENST00000564844 GPR108Q9NPR9 543 aa23.22■■□□□ 1.31
MAP1LC3B-206ENST00000564844 CNNM1Q9NRU3 951 aa23.22■■□□□ 1.31
MAP1LC3B-206ENST00000564844 MMP1P03956 469 aa23.22■■□□□ 1.31
MAP1LC3B-206ENST00000564844 SARSP49591 514 aaKnown RBP23.22■■□□□ 1.31
MAP1LC3B-206ENST00000564844 ADD3Q9UEY8 706 aaKnown RBP23.22■■□□□ 1.31
MAP1LC3B-206ENST00000564844 IQSEC3Q9UPP2 1182 aaPredicted RBP23.22■■□□□ 1.31
MAP1LC3B-206ENST00000564844 KRT9P35527 623 aa23.22■■□□□ 1.31
MAP1LC3B-206ENST00000564844 FILIP1LQ4L180 1135 aa23.22■■□□□ 1.31
MAP1LC3B-206ENST00000564844 GOLGA6L1Q8N7Z2 621 aa23.22■■□□□ 1.31
MAP1LC3B-206ENST00000564844 PANX2Q96RD6 677 aa23.22■■□□□ 1.31
MAP1LC3B-206ENST00000564844 NAPBQ9H115 298 aa23.22■■□□□ 1.31
MAP1LC3B-206ENST00000564844 PHKA1P46020 1223 aa23.21■■□□□ 1.31
MAP1LC3B-206ENST00000564844 IFIT5Q13325 482 aaKnown RBP23.21■■□□□ 1.31
MAP1LC3B-206ENST00000564844 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.21■■□□□ 1.31
MAP1LC3B-206ENST00000564844 STRN4Q9NRL3 753 aa23.21■■□□□ 1.31
MAP1LC3B-206ENST00000564844 MYO6Q9UM54 1294 aa23.21■■□□□ 1.31
MAP1LC3B-206ENST00000564844 ADD2P35612 726 aa23.2■■□□□ 1.3
MAP1LC3B-206ENST00000564844 TTC31Q49AM3 519 aaPredicted RBP23.2■■□□□ 1.3
MAP1LC3B-206ENST00000564844 RRAGBQ5VZM2 374 aa23.2■■□□□ 1.3
MAP1LC3B-206ENST00000564844 TRIM22Q8IYM9 498 aa23.2■■□□□ 1.3
MAP1LC3B-206ENST00000564844 MIGA1Q8NAN2 632 aa23.2■■□□□ 1.3
MAP1LC3B-206ENST00000564844 SYMPKQ92797 1274 aaKnown RBP23.2■■□□□ 1.3
MAP1LC3B-206ENST00000564844 LMO7Q8WWI1 1683 aa23.2■■□□□ 1.3
MAP1LC3B-206ENST00000564844 SPATA1Q5VX52 437 aa23.2■■□□□ 1.3
MAP1LC3B-206ENST00000564844 RASGRP2Q7LDG7 609 aa23.2■■□□□ 1.3
MAP1LC3B-206ENST00000564844 PSD3Q9NYI0 1048 aa23.2■■□□□ 1.3
MAP1LC3B-206ENST00000564844 C5P01031 1676 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms