RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 DNAJC18Q9H819 358 aa11.94□□□□□ -0.5
CDH1-206ENST00000564676 ZFYVE28Q9HCC9 887 aa11.94□□□□□ -0.5
CDH1-206ENST00000564676 AFG3L2Q9Y4W6 797 aa11.94□□□□□ -0.5
CDH1-206ENST00000564676 DOCK1Q14185 1865 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 TRIM75PA6NK02 468 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 USP17L5A8MUK1 530 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 GPAA1O43292 621 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 GDF11O95390 407 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 ASNSP08243 561 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 CYP2D6P10635 497 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 SPP2Q13103 211 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 CRHR2Q13324 411 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 CERKLQ49MI3 558 aaPredicted RBP11.93□□□□□ -0.5
CDH1-206ENST00000564676 FASTKD5Q7L8L6 764 aaKnown RBP11.93□□□□□ -0.5
CDH1-206ENST00000564676 ZNF296Q8WUU4 475 aaPredicted RBP11.93□□□□□ -0.5
CDH1-206ENST00000564676 CFHR5Q9BXR6 569 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 TBC1D2Q9BYX2 928 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 AS3MTQ9HBK9 375 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 GINM1Q9NU53 330 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 SIPA1L1O43166 1804 aa11.93□□□□□ -0.5
CDH1-206ENST00000564676 NAV1Q8NEY1 1877 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 A0A0G2JLL6 359 aaPredicted RBP11.92□□□□□ -0.5
CDH1-206ENST00000564676 USP17L12C9JPN9 530 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 USP17L21D6R901 530 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 M0R2C6 588 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 FKTNO75072 461 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 APPP05067 770 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 GNAT2P19087 354 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 NOM1Q5C9Z4 860 aaKnown RBP11.92□□□□□ -0.5
CDH1-206ENST00000564676 ZMYM1Q5SVZ6 1142 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 GADL1Q6ZQY3 521 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 PRRT2Q7Z6L0 340 aaPredicted RBP11.92□□□□□ -0.5
CDH1-206ENST00000564676 ANKRD23Q86SG2 305 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 ZNF280CQ8ND82 737 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 RILPL2Q969X0 211 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 ZCCHC17Q9NP64 241 aaKnown RBP11.92□□□□□ -0.5
CDH1-206ENST00000564676 CABP5Q9NP86 173 aa11.92□□□□□ -0.5
CDH1-206ENST00000564676 BAZ2AQ9UIF9 1905 aaKnown RBP11.92□□□□□ -0.5
CDH1-206ENST00000564676 PDHXO00330 501 aa11.91□□□□□ -0.5
CDH1-206ENST00000564676 GH2P01242 217 aa11.91□□□□□ -0.5
CDH1-206ENST00000564676 SHMT1P34896 483 aa11.91□□□□□ -0.5
CDH1-206ENST00000564676 JAG1P78504 1218 aa11.91□□□□□ -0.5
CDH1-206ENST00000564676 GABPAQ06546 454 aa11.91□□□□□ -0.5
CDH1-206ENST00000564676 DGKZQ13574 1117 aa11.91□□□□□ -0.5
CDH1-206ENST00000564676 ABCB5Q2M3G0 1257 aa11.91□□□□□ -0.5
CDH1-206ENST00000564676 TATDN1Q6P1N9 297 aa11.91□□□□□ -0.5
CDH1-206ENST00000564676 DYNLL2Q96FJ2 89 aa11.91□□□□□ -0.5
CDH1-206ENST00000564676 SEC62Q99442 399 aaKnown RBP11.91□□□□□ -0.5
CDH1-206ENST00000564676 OSBPL3Q9H4L5 887 aa11.91□□□□□ -0.5
CDH1-206ENST00000564676 SWAP70Q9UH65 585 aa11.91□□□□□ -0.5
CDH1-206ENST00000564676 ZBTB21Q9ULJ3 1066 aa11.91□□□□□ -0.5
CDH1-206ENST00000564676 LAMB1P07942 1786 aa11.91□□□□□ -0.5
CDH1-206ENST00000564676 ATAD5Q96QE3 1844 aa11.9□□□□□ -0.5
CDH1-206ENST00000564676 CYP2D7A0A087X1C5 515 aa11.9□□□□□ -0.5
CDH1-206ENST00000564676 GSG1L2A8MUP6 293 aa11.9□□□□□ -0.5
CDH1-206ENST00000564676 MINDY4BA8MYZ0 360 aa11.9□□□□□ -0.5
CDH1-206ENST00000564676 PATL2C9JE40 543 aaKnown RBP11.9□□□□□ -0.5
CDH1-206ENST00000564676 MPHOSPH10O00566 681 aaKnown RBP11.9□□□□□ -0.5
CDH1-206ENST00000564676 TDO2P48775 406 aa11.9□□□□□ -0.5
CDH1-206ENST00000564676 MOGSQ13724 837 aa11.9□□□□□ -0.5
CDH1-206ENST00000564676 RAB3GAP1Q15042 981 aa11.9□□□□□ -0.5
CDH1-206ENST00000564676 SHROOM1Q2M3G4 852 aaPredicted RBP11.9□□□□□ -0.5
CDH1-206ENST00000564676 C12orf60Q5U649 245 aa11.9□□□□□ -0.5
CDH1-206ENST00000564676 GIMAP6Q6P9H5 292 aa11.9□□□□□ -0.5
CDH1-206ENST00000564676 CTR9Q6PD62 1173 aa11.9□□□□□ -0.5
CDH1-206ENST00000564676 SLC44A5Q8NCS7 719 aa11.9□□□□□ -0.5
CDH1-206ENST00000564676 WDR18Q9BV38 432 aa11.9□□□□□ -0.5
CDH1-206ENST00000564676 NACAP1Q9BZK3 213 aa11.9□□□□□ -0.5
CDH1-206ENST00000564676 ARPP21Q9UBL0 812 aaPredicted RBP11.9□□□□□ -0.5
CDH1-206ENST00000564676 C19orf67A6NJJ6 358 aa11.89□□□□□ -0.51
CDH1-206ENST00000564676 TLR2O60603 784 aa11.89□□□□□ -0.51
CDH1-206ENST00000564676 HMGCS2P54868 508 aa11.89□□□□□ -0.51
CDH1-206ENST00000564676 SP3Q02447 781 aa11.89□□□□□ -0.51
CDH1-206ENST00000564676 MTMR2Q13614 643 aa11.89□□□□□ -0.51
CDH1-206ENST00000564676 GPAT2Q6NUI2 795 aa11.89□□□□□ -0.51
CDH1-206ENST00000564676 CCDC129Q6ZRS4 1044 aa11.89□□□□□ -0.51
CDH1-206ENST00000564676 CTU1Q7Z7A3 348 aaKnown RBP11.89□□□□□ -0.51
CDH1-206ENST00000564676 IFNL3Q8IZI9 196 aa11.89□□□□□ -0.51
CDH1-206ENST00000564676 PARK7Q99497 189 aaKnown RBP11.89□□□□□ -0.51
CDH1-206ENST00000564676 FEZ1Q99689 392 aa11.89□□□□□ -0.51
CDH1-206ENST00000564676 HELLSQ9NRZ9 838 aa11.89□□□□□ -0.51
CDH1-206ENST00000564676 TMOD4Q9NZQ9 345 aa11.89□□□□□ -0.51
CDH1-206ENST00000564676 TAOK2Q9UL54 1235 aa11.89□□□□□ -0.51
CDH1-206ENST00000564676 PHIPQ8WWQ0 1821 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 C19orf81C9J6K1 198 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 USP17L10C9JJH3 530 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 SMIM22K7EJ46 135 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 NEFLP07196 543 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 PDE4AP27815 886 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 CDK8P49336 464 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 BACE1P56817 501 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 SEPT2Q15019 361 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 MCMDC2Q4G0Z9 681 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 SBK1Q52WX2 424 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 TICAM2Q86XR7 235 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 STK11IPQ8N1F8 1099 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 PROCA1Q8NCQ7 364 aaPredicted RBP11.88□□□□□ -0.51
CDH1-206ENST00000564676 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
CDH1-206ENST00000564676 FAM227BQ96M60 508 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms