RNA–Protein interactions for RNA: ENST00000564547.1

TRAPPC2L-208, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 2

Gene TRAPPC2L, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-208ENST00000564547 BACE1P56817 501 aa17.36■□□□□ 0.37
TRAPPC2L-208ENST00000564547 PPP4CP60510 307 aa17.36■□□□□ 0.37
TRAPPC2L-208ENST00000564547 G3BP1Q13283 466 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRAPPC2L-208ENST00000564547 MAP3K21Q5TCX8 1036 aa17.36■□□□□ 0.37
TRAPPC2L-208ENST00000564547 NAA16Q6N069 864 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC2L-208ENST00000564547 USP6NLQ92738 828 aa17.36■□□□□ 0.37
TRAPPC2L-208ENST00000564547 GDF15Q99988 308 aa17.36■□□□□ 0.37
TRAPPC2L-208ENST00000564547 WDR18Q9BV38 432 aa17.36■□□□□ 0.37
TRAPPC2L-208ENST00000564547 ANTXR1Q9H6X2 564 aa17.36■□□□□ 0.37
TRAPPC2L-208ENST00000564547 DBNLQ9UJU6 430 aaKnown RBP17.36■□□□□ 0.37
TRAPPC2L-208ENST00000564547 NR2E3Q9Y5X4 410 aa17.36■□□□□ 0.37
TRAPPC2L-208ENST00000564547 PFASO15067 1338 aa17.36■□□□□ 0.37
TRAPPC2L-208ENST00000564547 HMGCRP04035 888 aa17.35■□□□□ 0.37
TRAPPC2L-208ENST00000564547 LDHCP07864 332 aa17.35■□□□□ 0.37
TRAPPC2L-208ENST00000564547 GSTO1P78417 241 aa17.35■□□□□ 0.37
TRAPPC2L-208ENST00000564547 Q7L0L9 218 aa17.35■□□□□ 0.37
TRAPPC2L-208ENST00000564547 EAF2Q96CJ1 260 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC2L-208ENST00000564547 CCDC8Q9H0W5 538 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC2L-208ENST00000564547 CDK5RAP2Q96SN8 1893 aa17.35■□□□□ 0.37
TRAPPC2L-208ENST00000564547 CCND3P30281 292 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC2L-208ENST00000564547 GCLCP48506 637 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC2L-208ENST00000564547 HERVK_113P62684 666 aa17.34■□□□□ 0.37
TRAPPC2L-208ENST00000564547 MIGA1Q8NAN2 632 aa17.34■□□□□ 0.37
TRAPPC2L-208ENST00000564547 SSH3Q8TE77 659 aa17.34■□□□□ 0.37
TRAPPC2L-208ENST00000564547 FLRT1Q9NZU1 646 aa17.34■□□□□ 0.37
TRAPPC2L-208ENST00000564547 PI4KBQ9UBF8 816 aa17.34■□□□□ 0.37
TRAPPC2L-208ENST00000564547 ZBTB21Q9ULJ3 1066 aa17.34■□□□□ 0.37
TRAPPC2L-208ENST00000564547 VCANP13611 3396 aa17.34■□□□□ 0.37
TRAPPC2L-208ENST00000564547 RPTORQ8N122 1335 aa17.33■□□□□ 0.36
TRAPPC2L-208ENST00000564547 PRKAR2AP13861 404 aaKnown RBP17.33■□□□□ 0.36
TRAPPC2L-208ENST00000564547 HOXA7P31268 230 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC2L-208ENST00000564547 ATP8B2P98198 1209 aa17.33■□□□□ 0.36
TRAPPC2L-208ENST00000564547 CACNB2Q08289 660 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC2L-208ENST00000564547 LHX8Q68G74 356 aa17.33■□□□□ 0.36
TRAPPC2L-208ENST00000564547 ACER1Q8TDN7 264 aa17.33■□□□□ 0.36
TRAPPC2L-208ENST00000564547 HERC5Q9UII4 1024 aaKnown RBP17.33■□□□□ 0.36
TRAPPC2L-208ENST00000564547 PNMA3Q9UL41 463 aa17.33■□□□□ 0.36
TRAPPC2L-208ENST00000564547 OGDHLQ9ULD0 1010 aa17.33■□□□□ 0.36
TRAPPC2L-208ENST00000564547 SMIM22K7EJ46 135 aa17.32■□□□□ 0.36
TRAPPC2L-208ENST00000564547 UQCRFS1P1P0C7P4 283 aa17.32■□□□□ 0.36
TRAPPC2L-208ENST00000564547 ZYXQ15942 572 aaKnown RBP17.32■□□□□ 0.36
TRAPPC2L-208ENST00000564547 TTC39AQ5SRH9 613 aa17.32■□□□□ 0.36
TRAPPC2L-208ENST00000564547 NECAB2Q7Z6G3 386 aa17.32■□□□□ 0.36
TRAPPC2L-208ENST00000564547 DDX60LQ5H9U9 1706 aaKnown RBP17.31■□□□□ 0.36
TRAPPC2L-208ENST00000564547 SURF6O75683 361 aaKnown RBP17.31■□□□□ 0.36
TRAPPC2L-208ENST00000564547 GH2P01242 217 aa17.31■□□□□ 0.36
TRAPPC2L-208ENST00000564547 MAGEA10P43363 369 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC2L-208ENST00000564547 SLFNL1Q499Z3 407 aa17.31■□□□□ 0.36
TRAPPC2L-208ENST00000564547 MORN1Q5T089 497 aa17.31■□□□□ 0.36
TRAPPC2L-208ENST00000564547 PAGR1Q9BTK6 254 aa17.31■□□□□ 0.36
TRAPPC2L-208ENST00000564547 HMX1Q9NP08 348 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC2L-208ENST00000564547 HDAC5Q9UQL6 1122 aa17.31■□□□□ 0.36
TRAPPC2L-208ENST00000564547 MAP4K4O95819 1239 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC2L-208ENST00000564547 CYP7A1P22680 504 aa17.3■□□□□ 0.36
TRAPPC2L-208ENST00000564547 GUCY1A2P33402 732 aa17.3■□□□□ 0.36
TRAPPC2L-208ENST00000564547 IRX3P78415 501 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC2L-208ENST00000564547 GPRC5AQ8NFJ5 357 aa17.3■□□□□ 0.36
TRAPPC2L-208ENST00000564547 GPR108Q9NPR9 543 aa17.3■□□□□ 0.36
TRAPPC2L-208ENST00000564547 PRUNE2Q8WUY3 3088 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 USP17L10C9JJH3 530 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 ASNSP08243 561 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 COL6A1P12109 1028 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 PLCD1P51178 756 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 ERVK-9P63128 1117 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 ERVK-24P63145 666 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 LRRC26Q2I0M4 334 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 KIAA1755Q5JYT7 1200 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 GPR142Q7Z601 462 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 FOXP4Q8IVH2 680 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 TRPV1Q8NER1 839 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 NBPF3Q9H094 633 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 C11orf49Q9H6J7 331 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 BTBD7Q9P203 1132 aa17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 NOP58Q9Y2X3 529 aaKnown RBP17.29■□□□□ 0.36
TRAPPC2L-208ENST00000564547 CHGBP05060 677 aa17.28■□□□□ 0.36
TRAPPC2L-208ENST00000564547 TATDN1Q6P1N9 297 aa17.28■□□□□ 0.36
TRAPPC2L-208ENST00000564547 MAGEB6Q8N7X4 407 aa17.28■□□□□ 0.36
TRAPPC2L-208ENST00000564547 DHX36Q9H2U1 1008 aaKnown RBP17.28■□□□□ 0.36
TRAPPC2L-208ENST00000564547 AS3MTQ9HBK9 375 aa17.28■□□□□ 0.36
TRAPPC2L-208ENST00000564547 CDH23Q9H251 3354 aa17.28■□□□□ 0.36
TRAPPC2L-208ENST00000564547 SPTBN5Q9NRC6 3674 aaKnown RBP17.28■□□□□ 0.36
TRAPPC2L-208ENST00000564547 FOCADQ5VW36 1801 aa17.28■□□□□ 0.36
TRAPPC2L-208ENST00000564547 BAG3O95817 575 aa17.27■□□□□ 0.36
TRAPPC2L-208ENST00000564547 SHMT1P34896 483 aa17.27■□□□□ 0.36
TRAPPC2L-208ENST00000564547 PABPC4Q13310 644 aaKnown RBP eCLIP17.27■□□□□ 0.361e-6■■□□□ 13.4
TRAPPC2L-208ENST00000564547 CRACR2BQ8N4Y2 399 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC2L-208ENST00000564547 ANKLE1Q8NAG6 615 aa17.27■□□□□ 0.36
TRAPPC2L-208ENST00000564547 ZNF512BQ96KM6 892 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC2L-208ENST00000564547 TMOD4Q9NZQ9 345 aa17.27■□□□□ 0.36
TRAPPC2L-208ENST00000564547 MAST2Q6P0Q8 1798 aa17.26■□□□□ 0.35
TRAPPC2L-208ENST00000564547 A0A1W2PRG0 241 aa17.26■□□□□ 0.35
TRAPPC2L-208ENST00000564547 CCER2I3L3R5 266 aa17.26■□□□□ 0.35
TRAPPC2L-208ENST00000564547 IPO8O15397 1037 aaKnown RBP17.26■□□□□ 0.35
TRAPPC2L-208ENST00000564547 IDH1O75874 414 aaKnown RBP17.26■□□□□ 0.35
TRAPPC2L-208ENST00000564547 CYP2D6P10635 497 aa17.26■□□□□ 0.35
TRAPPC2L-208ENST00000564547 BMP8BP34820 402 aa17.26■□□□□ 0.35
TRAPPC2L-208ENST00000564547 OS9Q13438 667 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC2L-208ENST00000564547 CCDC158Q5M9N0 1113 aa17.26■□□□□ 0.35
TRAPPC2L-208ENST00000564547 ZKSCAN2Q63HK3 967 aa17.26■□□□□ 0.35
TRAPPC2L-208ENST00000564547 SLC17A8Q8NDX2 589 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms