RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 CYP2E1P05181 493 aaPredicted RBP17.28■□□□□ 0.36
CDR2-204ENST00000564542 FOXP4Q8IVH2 680 aaPredicted RBP17.28■□□□□ 0.36
CDR2-204ENST00000564542 CRACR2BQ8N4Y2 399 aaPredicted RBP17.28■□□□□ 0.36
CDR2-204ENST00000564542 TMEM57Q8N5G2 664 aa17.28■□□□□ 0.36
CDR2-204ENST00000564542 ZNF512BQ96KM6 892 aaPredicted RBP17.28■□□□□ 0.36
CDR2-204ENST00000564542 TRIM34Q9BYJ4 488 aa17.28■□□□□ 0.36
CDR2-204ENST00000564542 HMX1Q9NP08 348 aaPredicted RBP17.28■□□□□ 0.36
CDR2-204ENST00000564542 MYO5AQ9Y4I1 1855 aaKnown RBP17.28■□□□□ 0.36
CDR2-204ENST00000564542 C19orf81C9J6K1 198 aa17.27■□□□□ 0.36
CDR2-204ENST00000564542 JAG1P78504 1218 aa17.27■□□□□ 0.36
CDR2-204ENST00000564542 TRIM32Q13049 653 aa17.27■□□□□ 0.36
CDR2-204ENST00000564542 OS9Q13438 667 aaPredicted RBP17.27■□□□□ 0.36
CDR2-204ENST00000564542 SSH3Q8TE77 659 aa17.27■□□□□ 0.36
CDR2-204ENST00000564542 SOCS4Q8WXH5 440 aa17.27■□□□□ 0.36
CDR2-204ENST00000564542 TRIB2Q92519 343 aa17.27■□□□□ 0.36
CDR2-204ENST00000564542 ZBTB21Q9ULJ3 1066 aa17.27■□□□□ 0.36
CDR2-204ENST00000564542 USP17L10C9JJH3 530 aa17.26■□□□□ 0.35
CDR2-204ENST00000564542 GDF11O95390 407 aa17.26■□□□□ 0.35
CDR2-204ENST00000564542 HERVK_113P62684 666 aa17.26■□□□□ 0.35
CDR2-204ENST00000564542 MAP3K21Q5TCX8 1036 aa17.26■□□□□ 0.35
CDR2-204ENST00000564542 ZKSCAN2Q63HK3 967 aa17.26■□□□□ 0.35
CDR2-204ENST00000564542 GPRC5AQ8NFJ5 357 aa17.26■□□□□ 0.35
CDR2-204ENST00000564542 P2RX7Q99572 595 aaKnown RBP17.26■□□□□ 0.35
CDR2-204ENST00000564542 TXNRD2Q9NNW7 524 aa17.26■□□□□ 0.35
CDR2-204ENST00000564542 PALD1Q9ULE6 856 aa17.26■□□□□ 0.35
CDR2-204ENST00000564542 HLA-DOAP06340 250 aa17.25■□□□□ 0.35
CDR2-204ENST00000564542 XRCC5P13010 732 aaKnown RBP17.25■□□□□ 0.35
CDR2-204ENST00000564542 SHROOM1Q2M3G4 852 aaPredicted RBP17.25■□□□□ 0.35
CDR2-204ENST00000564542 GTF3C2Q8WUA4 911 aaPredicted RBP17.25■□□□□ 0.35
CDR2-204ENST00000564542 NUDT12Q9BQG2 462 aa17.25■□□□□ 0.35
CDR2-204ENST00000564542 NBPF3Q9H094 633 aa17.25■□□□□ 0.35
CDR2-204ENST00000564542 STAP2Q9UGK3 403 aa17.25■□□□□ 0.35
CDR2-204ENST00000564542 SURF6O75683 361 aaKnown RBP17.24■□□□□ 0.35
CDR2-204ENST00000564542 PRKAR2AP13861 404 aaKnown RBP17.24■□□□□ 0.35
CDR2-204ENST00000564542 CYP2B6P20813 491 aa17.24■□□□□ 0.35
CDR2-204ENST00000564542 MAPK4P31152 587 aa17.24■□□□□ 0.35
CDR2-204ENST00000564542 ZAP70P43403 619 aa17.24■□□□□ 0.35
CDR2-204ENST00000564542 MNX1P50219 401 aaPredicted RBP17.24■□□□□ 0.35
CDR2-204ENST00000564542 ATP8B2P98198 1209 aa17.24■□□□□ 0.35
CDR2-204ENST00000564542 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
CDR2-204ENST00000564542 CERS3Q8IU89 383 aa17.24■□□□□ 0.35
CDR2-204ENST00000564542 TRMT44Q8IYL2 757 aaKnown RBP17.24■□□□□ 0.35
CDR2-204ENST00000564542 C7orf61Q8IZ16 206 aa17.24■□□□□ 0.35
CDR2-204ENST00000564542 PIH1D3Q9NQM4 214 aaKnown RBP17.24■□□□□ 0.35
CDR2-204ENST00000564542 SAP30BPQ9UHR5 308 aaKnown RBP17.24■□□□□ 0.35
CDR2-204ENST00000564542 DBNLQ9UJU6 430 aaKnown RBP17.24■□□□□ 0.35
CDR2-204ENST00000564542 OGDHLQ9ULD0 1010 aa17.24■□□□□ 0.35
CDR2-204ENST00000564542 MYH1P12882 1939 aa17.23■□□□□ 0.35
CDR2-204ENST00000564542 SOX1O00570 391 aaPredicted RBP17.23■□□□□ 0.35
CDR2-204ENST00000564542 PEX10O60683 326 aa17.23■□□□□ 0.35
CDR2-204ENST00000564542 ERVK-9P63128 1117 aa17.23■□□□□ 0.35
CDR2-204ENST00000564542 ERVK-24P63145 666 aa17.23■□□□□ 0.35
CDR2-204ENST00000564542 GDF15Q99988 308 aa17.23■□□□□ 0.35
CDR2-204ENST00000564542 C11orf49Q9H6J7 331 aa17.23■□□□□ 0.35
CDR2-204ENST00000564542 RBPJLQ9UBG7 517 aa17.23■□□□□ 0.35
CDR2-204ENST00000564542 NOP58Q9Y2X3 529 aaKnown RBP17.23■□□□□ 0.35
CDR2-204ENST00000564542 ZKSCAN1P17029 563 aaPredicted RBP17.22■□□□□ 0.35
CDR2-204ENST00000564542 BMP8BP34820 402 aa17.22■□□□□ 0.35
CDR2-204ENST00000564542 DYNLL1P63167 89 aaKnown RBP17.22■□□□□ 0.35
CDR2-204ENST00000564542 USP17L2Q6R6M4 530 aa17.22■□□□□ 0.35
CDR2-204ENST00000564542 USP6NLQ92738 828 aa17.22■□□□□ 0.35
CDR2-204ENST00000564542 C1orf115Q9H7X2 142 aa17.22■□□□□ 0.35
CDR2-204ENST00000564542 EMILIN3Q9NT22 766 aa17.22■□□□□ 0.35
CDR2-204ENST00000564542 TLR7Q9NYK1 1049 aaKnown RBP17.22■□□□□ 0.35
CDR2-204ENST00000564542 IDH1O75874 414 aaKnown RBP17.21■□□□□ 0.35
CDR2-204ENST00000564542 GH2P01242 217 aa17.21■□□□□ 0.35
CDR2-204ENST00000564542 CYP7A1P22680 504 aa17.21■□□□□ 0.35
CDR2-204ENST00000564542 TATDN1Q6P1N9 297 aa17.21■□□□□ 0.35
CDR2-204ENST00000564542 GPR142Q7Z601 462 aa17.21■□□□□ 0.35
CDR2-204ENST00000564542 CCAR1Q8IX12 1150 aaKnown RBP17.21■□□□□ 0.35
CDR2-204ENST00000564542 LRCH3Q96II8 777 aa17.21■□□□□ 0.35
CDR2-204ENST00000564542 C12orf42Q96LP6 360 aa17.21■□□□□ 0.35
CDR2-204ENST00000564542 PAGR1Q9BTK6 254 aa17.21■□□□□ 0.35
CDR2-204ENST00000564542 EHD4Q9H223 541 aa17.21■□□□□ 0.35
CDR2-204ENST00000564542 PORCNQ9H237 461 aa17.21■□□□□ 0.35
CDR2-204ENST00000564542 ZMYND8Q9ULU4 1186 aaPredicted RBP17.21■□□□□ 0.35
CDR2-204ENST00000564542 RGS2P41220 211 aa17.2■□□□□ 0.34
CDR2-204ENST00000564542 USP5P45974 858 aa17.2■□□□□ 0.34
CDR2-204ENST00000564542 Q3C1V9 767 aa17.2■□□□□ 0.34
CDR2-204ENST00000564542 MORN1Q5T089 497 aa17.2■□□□□ 0.34
CDR2-204ENST00000564542 TMED8Q6PL24 325 aaPredicted RBP17.2■□□□□ 0.34
CDR2-204ENST00000564542 POTEEQ6S8J3 1075 aa17.2■□□□□ 0.34
CDR2-204ENST00000564542 FTSJ3Q8IY81 847 aaKnown RBP17.2■□□□□ 0.34
CDR2-204ENST00000564542 MIGA1Q8NAN2 632 aa17.2■□□□□ 0.34
CDR2-204ENST00000564542 EAF2Q96CJ1 260 aaPredicted RBP17.2■□□□□ 0.34
CDR2-204ENST00000564542 APBA2Q99767 749 aa17.2■□□□□ 0.34
CDR2-204ENST00000564542 COL6A3P12111 3177 aa17.2■□□□□ 0.34
CDR2-204ENST00000564542 PFASO15067 1338 aa17.2■□□□□ 0.34
CDR2-204ENST00000564542 FRMPD3Q5JV73 1810 aa17.19■□□□□ 0.34
CDR2-204ENST00000564542 CACNB2Q08289 660 aaPredicted RBP17.19■□□□□ 0.34
CDR2-204ENST00000564542 PLEKHH3Q7Z736 793 aa17.19■□□□□ 0.34
CDR2-204ENST00000564542 ITPRIPQ8IWB1 547 aa17.19■□□□□ 0.34
CDR2-204ENST00000564542 MAGEB6Q8N7X4 407 aa17.19■□□□□ 0.34
CDR2-204ENST00000564542 FEZ1Q99689 392 aa17.19■□□□□ 0.34
CDR2-204ENST00000564542 CCDC8Q9H0W5 538 aaPredicted RBP17.19■□□□□ 0.34
CDR2-204ENST00000564542 SERPINB13Q9UIV8 391 aa17.19■□□□□ 0.34
CDR2-204ENST00000564542 USP17L15C9J2P7 530 aa17.18■□□□□ 0.34
CDR2-204ENST00000564542 USP17L13C9JLJ4 530 aa17.18■□□□□ 0.34
CDR2-204ENST00000564542 USP17L11C9JVI0 530 aa17.18■□□□□ 0.34
CDR2-204ENST00000564542 USP17L18D6R9N7 530 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms