RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 C12orf40Q86WS4 652 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 MCATQ8IVS2 390 aaKnown RBP3.7□□□□□ -1.82
CHD9-209ENST00000564255 MRPL41Q8IXM3 137 aaKnown RBP3.7□□□□□ -1.82
CHD9-209ENST00000564255 ZSWIM2Q8NEG5 633 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 DCAF11Q8TEB1 546 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 USP26Q9BXU7 913 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 GSX1Q9H4S2 264 aaPredicted RBP3.7□□□□□ -1.82
CHD9-209ENST00000564255 CRIM1Q9NZV1 1036 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 PFDN2Q9UHV9 154 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 SHISA8B8ZZ34 492 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 DDX3YO15523 660 aaKnown RBP3.7□□□□□ -1.82
CHD9-209ENST00000564255 ADCY3O60266 1144 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 DEAF1O75398 565 aaPredicted RBP3.7□□□□□ -1.82
CHD9-209ENST00000564255 NTF4P34130 210 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 CD68P34810 354 aaPredicted RBP3.7□□□□□ -1.82
CHD9-209ENST00000564255 MASP1P48740 699 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 SLC7A5Q01650 507 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 SSRP1Q08945 709 aaKnown RBP3.7□□□□□ -1.82
CHD9-209ENST00000564255 TMEM67Q5HYA8 995 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 ZNF507Q8TCN5 953 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 TMPRSS13Q9BYE2 586 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 PPP1R9AQ9ULJ8 1098 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 ERBB4Q15303 1308 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 PRAMEF27A3QJZ7 478 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 FANCGO15287 622 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 ADAMTS2O95450 1211 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 HOXB4P17483 251 aaPredicted RBP3.69□□□□□ -1.82
CHD9-209ENST00000564255 NLRP12P59046 1061 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 AMPD3Q01432 767 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 TCEA2Q15560 299 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 SLC10A6Q3KNW5 377 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 KRT26Q7Z3Y9 468 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 FBXO11Q86XK2 927 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 DMRTC2Q8IXT2 367 aaPredicted RBP3.69□□□□□ -1.82
CHD9-209ENST00000564255 SLFN12Q8IYM2 578 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 GALNT6Q8NCL4 622 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 SGSM3Q96HU1 749 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 TMEM87BQ96K49 555 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 SLC26A8Q96RN1 970 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 CSADQ9Y600 493 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 RGS13O14921 159 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 RFPL3O75679 317 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 VIL1P09327 827 aaKnown RBP3.69□□□□□ -1.82
CHD9-209ENST00000564255 BCRP11274 1271 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 PMS1P54277 932 aaKnown RBP3.69□□□□□ -1.82
CHD9-209ENST00000564255 DALRD3Q5D0E6 543 aaKnown RBP3.69□□□□□ -1.82
CHD9-209ENST00000564255 PPM1JQ5JR12 505 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 KIAA1211LQ6NV74 962 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 RPUSD2Q8IZ73 545 aaKnown RBP3.69□□□□□ -1.82
CHD9-209ENST00000564255 FAM13CQ8NE31 585 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 UBASH3BQ8TF42 649 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 SUSD2Q9UGT4 822 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 CCDC163A0A0D9SF12 145 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 DLL1O00548 723 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 TERTO14746 1132 aaKnown RBP3.69□□□□□ -1.82
CHD9-209ENST00000564255 RAB11FIP3O75154 756 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 ASMTLO95671 621 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 CAPNS1P04632 268 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 PPFIBP1Q86W92 1011 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 HID1Q8IV36 788 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 TMEM192Q8IY95 271 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 LRRC47Q8N1G4 583 aaKnown RBP3.69□□□□□ -1.82
CHD9-209ENST00000564255 ZBTB38Q8NAP3 1195 aaPredicted RBP3.69□□□□□ -1.82
CHD9-209ENST00000564255 RNF214Q8ND24 703 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 KISS1RQ969F8 398 aaPredicted RBP3.69□□□□□ -1.82
CHD9-209ENST00000564255 SUCOQ9UBS9 1254 aaKnown RBP3.69□□□□□ -1.82
CHD9-209ENST00000564255 KLHL3Q9UH77 587 aa3.69□□□□□ -1.82
CHD9-209ENST00000564255 IQCA1LA6NCM1 817 aa3.68□□□□□ -1.82
CHD9-209ENST00000564255 YARSP54577 528 aaKnown RBP3.68□□□□□ -1.82
CHD9-209ENST00000564255 TAF7LQ5H9L4 462 aa3.68□□□□□ -1.82
CHD9-209ENST00000564255 ZNF513Q8N8E2 541 aaPredicted RBP3.68□□□□□ -1.82
CHD9-209ENST00000564255 SMG8Q8ND04 991 aaKnown RBP3.68□□□□□ -1.82
CHD9-209ENST00000564255 SMARCC1Q92922 1105 aaPredicted RBP3.68□□□□□ -1.82
CHD9-209ENST00000564255 FANCD2OSQ96PS1 177 aa3.68□□□□□ -1.82
CHD9-209ENST00000564255 SUGCTQ9HAC7 445 aa3.68□□□□□ -1.82
CHD9-209ENST00000564255 FBRSQ9HAH7 460 aa3.68□□□□□ -1.82
CHD9-209ENST00000564255 METTL14Q9HCE5 456 aaKnown RBP3.68□□□□□ -1.82
CHD9-209ENST00000564255 DISC1Q9NRI5 854 aa3.68□□□□□ -1.82
CHD9-209ENST00000564255 PCDHB10Q9UN67 800 aa3.68□□□□□ -1.82
CHD9-209ENST00000564255 PLAAQ9Y263 795 aa3.68□□□□□ -1.82
CHD9-209ENST00000564255 UBOX5O94941 541 aa3.68□□□□□ -1.82
CHD9-209ENST00000564255 NEFMP07197 916 aa3.68□□□□□ -1.82
CHD9-209ENST00000564255 RAG1P15918 1043 aa3.68□□□□□ -1.82
CHD9-209ENST00000564255 ANAPC15P60006 121 aa3.68□□□□□ -1.82
CHD9-209ENST00000564255 TM4SF20Q53R12 229 aa3.68□□□□□ -1.82
CHD9-209ENST00000564255 A0A1W2PQU0 124 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 CST3P01034 146 aaPredicted RBP3.67□□□□□ -1.82
CHD9-209ENST00000564255 CELA2BP08218 269 aaPredicted RBP3.67□□□□□ -1.82
CHD9-209ENST00000564255 POLR2BP30876 1174 aaKnown RBP3.67□□□□□ -1.82
CHD9-209ENST00000564255 DGKGP49619 791 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 ETF1P62495 437 aaKnown RBP3.67□□□□□ -1.82
CHD9-209ENST00000564255 SLBPQ14493 270 aaKnown RBP eCLIP3.67□□□□□ -1.82
CHD9-209ENST00000564255 BBS9Q3SYG4 887 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 GNPTABQ3T906 1256 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 LYPD4Q6UWN0 246 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 KIAA1211Q6ZU35 1233 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 KCT2Q8NC54 265 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 NINJ1Q92982 152 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 KIF2CQ99661 725 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 ATXN3LQ9H3M9 355 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms