RNA–Protein interactions for RNA: ENST00000564131.1

RRN3-206, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

TSL 1 (best) BASIC

Gene RRN3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-206ENST00000564131 HERVK_113P62684 666 aa13.3□□□□□ -0.28
RRN3-206ENST00000564131 IRX3P78415 501 aaPredicted RBP13.3□□□□□ -0.28
RRN3-206ENST00000564131 G3BP1Q13283 466 aaKnown RBP eCLIP13.3□□□□□ -0.28
RRN3-206ENST00000564131 MTMR2Q13614 643 aa13.3□□□□□ -0.28
RRN3-206ENST00000564131 SH3RF3Q8TEJ3 882 aaPredicted RBP13.3□□□□□ -0.28
RRN3-206ENST00000564131 USP6NLQ92738 828 aa13.3□□□□□ -0.28
RRN3-206ENST00000564131 NOL10Q9BSC4 688 aaKnown RBP13.3□□□□□ -0.28
RRN3-206ENST00000564131 MAST2Q6P0Q8 1798 aa13.3□□□□□ -0.28
RRN3-206ENST00000564131 UNC80Q8N2C7 3258 aa13.29□□□□□ -0.28
RRN3-206ENST00000564131 USP17L10C9JJH3 530 aa13.29□□□□□ -0.28
RRN3-206ENST00000564131 DLL1O00548 723 aa13.29□□□□□ -0.28
RRN3-206ENST00000564131 IPO8O15397 1037 aaKnown RBP13.29□□□□□ -0.28
RRN3-206ENST00000564131 COL6A1P12109 1028 aa13.29□□□□□ -0.28
RRN3-206ENST00000564131 TRIM32Q13049 653 aa13.29□□□□□ -0.28
RRN3-206ENST00000564131 DNAJC18Q9H819 358 aa13.29□□□□□ -0.28
RRN3-206ENST00000564131 TXNRD2Q9NNW7 524 aa13.29□□□□□ -0.28
RRN3-206ENST00000564131 RBPJLQ9UBG7 517 aa13.29□□□□□ -0.28
RRN3-206ENST00000564131 DNAH12Q6ZR08 3092 aa13.28□□□□□ -0.28
RRN3-206ENST00000564131 LAMA2P24043 3122 aaKnown RBP13.28□□□□□ -0.28
RRN3-206ENST00000564131 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
RRN3-206ENST00000564131 NAA16Q6N069 864 aaPredicted RBP13.28□□□□□ -0.28
RRN3-206ENST00000564131 TMED8Q6PL24 325 aaPredicted RBP13.28□□□□□ -0.28
RRN3-206ENST00000564131 CERS3Q8IU89 383 aa13.28□□□□□ -0.28
RRN3-206ENST00000564131 C7orf61Q8IZ16 206 aa13.28□□□□□ -0.28
RRN3-206ENST00000564131 TDHQ8IZJ6 230 aa13.28□□□□□ -0.28
RRN3-206ENST00000564131 AATFQ9NY61 560 aaKnown RBP eCLIP13.28□□□□□ -0.28
RRN3-206ENST00000564131 ZBTB21Q9ULJ3 1066 aa13.28□□□□□ -0.28
RRN3-206ENST00000564131 FLT1P17948 1338 aa13.28□□□□□ -0.28
RRN3-206ENST00000564131 PNMA6EA0A0J9YXQ4 647 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 TRIM27P14373 513 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 CYP2B6P20813 491 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 RGS2P41220 211 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 MAGEA10P43363 369 aaPredicted RBP13.27□□□□□ -0.29
RRN3-206ENST00000564131 ERVK-9P63128 1117 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 ERVK-24P63145 666 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 JAG1P78504 1218 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 PDE3AQ14432 1141 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 CCDC158Q5M9N0 1113 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 MORN1Q5T089 497 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 LHX8Q68G74 356 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 ATF7IPQ6VMQ6 1270 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 TGFBRAP1Q8WUH2 860 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 C12orf42Q96LP6 360 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 ZMYND8Q9ULU4 1186 aaPredicted RBP13.27□□□□□ -0.29
RRN3-206ENST00000564131 PFASO15067 1338 aa13.27□□□□□ -0.29
RRN3-206ENST00000564131 CYP2E1P05181 493 aaPredicted RBP13.26□□□□□ -0.29
RRN3-206ENST00000564131 ZKSCAN1P17029 563 aaPredicted RBP13.26□□□□□ -0.29
RRN3-206ENST00000564131 CACNB2Q08289 660 aaPredicted RBP13.26□□□□□ -0.29
RRN3-206ENST00000564131 POLA2Q14181 598 aa13.26□□□□□ -0.29
RRN3-206ENST00000564131 Q3C1V9 767 aa13.26□□□□□ -0.29
RRN3-206ENST00000564131 TNNI3KQ59H18 835 aa13.26□□□□□ -0.29
RRN3-206ENST00000564131 USP17L2Q6R6M4 530 aa13.26□□□□□ -0.29
RRN3-206ENST00000564131 GPR142Q7Z601 462 aa13.26□□□□□ -0.29
RRN3-206ENST00000564131 PLEKHH3Q7Z736 793 aa13.26□□□□□ -0.29
RRN3-206ENST00000564131 MAPKAPK5Q8IW41 473 aa13.26□□□□□ -0.29
RRN3-206ENST00000564131 CRACR2BQ8N4Y2 399 aaPredicted RBP13.26□□□□□ -0.29
RRN3-206ENST00000564131 EMILIN3Q9NT22 766 aa13.26□□□□□ -0.29
RRN3-206ENST00000564131 PALD1Q9ULE6 856 aa13.26□□□□□ -0.29
RRN3-206ENST00000564131 STXBP5LQ9Y2K9 1186 aa13.26□□□□□ -0.29
RRN3-206ENST00000564131 RABGAP1Q9Y3P9 1069 aa13.26□□□□□ -0.29
RRN3-206ENST00000564131 MYO5AQ9Y4I1 1855 aaKnown RBP13.26□□□□□ -0.29
RRN3-206ENST00000564131 FPGT-TNNI3KV9GXZ4 949 aa13.26□□□□□ -0.29
RRN3-206ENST00000564131 HLA-DOAP06340 250 aa13.25□□□□□ -0.29
RRN3-206ENST00000564131 TTC39AQ5SRH9 613 aa13.25□□□□□ -0.29
RRN3-206ENST00000564131 TATDN1Q6P1N9 297 aa13.25□□□□□ -0.29
RRN3-206ENST00000564131 POTEEQ6S8J3 1075 aa13.25□□□□□ -0.29
RRN3-206ENST00000564131 LBX2Q6XYB7 198 aa13.25□□□□□ -0.29
RRN3-206ENST00000564131 ADGRA1Q86SQ6 560 aa13.25□□□□□ -0.29
RRN3-206ENST00000564131 DEFB123Q8N688 67 aa13.25□□□□□ -0.29
RRN3-206ENST00000564131 SSH3Q8TE77 659 aa13.25□□□□□ -0.29
RRN3-206ENST00000564131 APBA2Q99767 749 aa13.25□□□□□ -0.29
RRN3-206ENST00000564131 TRIM34Q9BYJ4 488 aa13.25□□□□□ -0.29
RRN3-206ENST00000564131 EHD4Q9H223 541 aa13.25□□□□□ -0.29
RRN3-206ENST00000564131 PORCNQ9H237 461 aa13.25□□□□□ -0.29
RRN3-206ENST00000564131 MYH1P12882 1939 aa13.25□□□□□ -0.29
RRN3-206ENST00000564131 VCANP13611 3396 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 USP17L15C9J2P7 530 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 USP17L13C9JLJ4 530 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 USP17L11C9JVI0 530 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 USP17L18D6R9N7 530 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 USP17L22D6RA61 530 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 USP17L17D6RBQ6 530 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 USP17L19D6RCP7 530 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 USP17L20D6RJB6 530 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 GLRX3O76003 335 aaKnown RBP13.24□□□□□ -0.29
RRN3-206ENST00000564131 HOXC6P09630 235 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 USP14P54578 494 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 CCNA1P78396 465 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 USP17L24Q0WX57 530 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 MAP2K5Q13163 448 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 CCAR1Q8IX12 1150 aaKnown RBP13.24□□□□□ -0.29
RRN3-206ENST00000564131 DBNDD2Q9BQY9 259 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 SNRKQ9NRH2 765 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 MTMR10Q9NXD2 777 aa13.24□□□□□ -0.29
RRN3-206ENST00000564131 NOP58Q9Y2X3 529 aaKnown RBP13.24□□□□□ -0.29
RRN3-206ENST00000564131 FRMPD3Q5JV73 1810 aa13.23□□□□□ -0.29
RRN3-206ENST00000564131 MSCO60682 206 aa13.23□□□□□ -0.29
RRN3-206ENST00000564131 GDF11O95390 407 aa13.23□□□□□ -0.29
RRN3-206ENST00000564131 SYN1P17600 705 aa13.23□□□□□ -0.29
RRN3-206ENST00000564131 ATP8B2P98198 1209 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms