RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 PTCH1Q13635 1447 aa8.66□□□□□ -1.02
HERPUD1-208ENST00000563911 LMNB1P20700 586 aa8.66□□□□□ -1.02
HERPUD1-208ENST00000563911 GSTM4Q03013 218 aa8.66□□□□□ -1.02
HERPUD1-208ENST00000563911 PCNX4Q63HM2 1172 aa8.66□□□□□ -1.02
HERPUD1-208ENST00000563911 TREML4Q6UXN2 200 aa8.66□□□□□ -1.02
HERPUD1-208ENST00000563911 NEDD1Q8NHV4 660 aa8.66□□□□□ -1.02
HERPUD1-208ENST00000563911 PRDM6Q9NQX0 595 aa8.66□□□□□ -1.02
HERPUD1-208ENST00000563911 ENAMQ9NRM1 1142 aa8.66□□□□□ -1.02
HERPUD1-208ENST00000563911 NME2P22392 152 aa8.65□□□□□ -1.02
HERPUD1-208ENST00000563911 EIF4A3P38919 411 aaKnown RBP8.65□□□□□ -1.02
HERPUD1-208ENST00000563911 HGSNATQ68CP4 663 aa8.65□□□□□ -1.02
HERPUD1-208ENST00000563911 SULF2Q8IWU5 870 aa8.65□□□□□ -1.02
HERPUD1-208ENST00000563911 DMRTC2Q8IXT2 367 aaPredicted RBP8.65□□□□□ -1.02
HERPUD1-208ENST00000563911 PHC3Q8NDX5 983 aa8.65□□□□□ -1.02
HERPUD1-208ENST00000563911 SPON2Q9BUD6 331 aa8.65□□□□□ -1.02
HERPUD1-208ENST00000563911 CBX8Q9HC52 389 aa8.65□□□□□ -1.02
HERPUD1-208ENST00000563911 USP35Q9P2H5 1018 aa8.65□□□□□ -1.02
HERPUD1-208ENST00000563911 COL22A1Q8NFW1 1626 aaPredicted RBP8.65□□□□□ -1.03
HERPUD1-208ENST00000563911 PXDNQ92626 1479 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 NUP155O75694 1391 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 FSCN2O14926 492 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 PF4P02776 101 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 RPS26P62854 115 aaKnown RBP8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 C19orf57Q0VDD7 668 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 AGMOQ6ZNB7 445 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 SVOPQ8N4V2 548 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 TINF2Q9BSI4 451 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 CARD10Q9BWT7 1032 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 EMILIN2Q9BXX0 1053 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 ADAMTS1Q9UHI8 967 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 IQGAP3Q86VI3 1631 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 NEXMIFQ5QGS0 1516 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 RALGAPBQ86X10 1494 aa8.64□□□□□ -1.03
HERPUD1-208ENST00000563911 BMP6P22004 513 aa8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 ARNTP27540 789 aa8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 FAM160A1Q05DH4 1040 aa8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 PAK2Q13177 524 aa8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 CAMK2GQ13555 558 aaPredicted RBP8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 LRRC14Q15048 493 aa8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 ZNF385CQ66K41 422 aaPredicted RBP8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 KIAA0825Q8IV33 1275 aa8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 STK35Q8TDR2 534 aa8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 ZNF296Q8WUU4 475 aaPredicted RBP8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 WNT8BQ93098 351 aa8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 SOX17Q9H6I2 414 aaPredicted RBP8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 CYP8B1Q9UNU6 501 aa8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 BRWD3Q6RI45 1802 aa8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 BLMP54132 1417 aaPredicted RBP8.63□□□□□ -1.03
HERPUD1-208ENST00000563911 EIF4EBP3O60516 100 aaPredicted RBP8.62□□□□□ -1.03
HERPUD1-208ENST00000563911 NID1P14543 1247 aa8.62□□□□□ -1.03
HERPUD1-208ENST00000563911 TFE3P19532 575 aaPredicted RBP8.62□□□□□ -1.03
HERPUD1-208ENST00000563911 AP3B2Q13367 1082 aa8.62□□□□□ -1.03
HERPUD1-208ENST00000563911 SNAP47Q5SQN1 464 aa8.62□□□□□ -1.03
HERPUD1-208ENST00000563911 TRAPPC3LQ5T215 181 aa8.62□□□□□ -1.03
HERPUD1-208ENST00000563911 RHOVQ96L33 236 aa8.62□□□□□ -1.03
HERPUD1-208ENST00000563911 OSGEPQ9NPF4 335 aa8.62□□□□□ -1.03
HERPUD1-208ENST00000563911 SLIT2O94813 1529 aa8.62□□□□□ -1.03
HERPUD1-208ENST00000563911 CYP11A1P05108 521 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 DGKGP49619 791 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 LMNB2Q03252 620 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 COL9A3Q14050 684 aaPredicted RBP8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 RASIP1Q5U651 963 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 LLGL2Q6P1M3 1020 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 FBXL19Q6PCT2 694 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 VPS37DQ86XT2 251 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 UNC5CLQ8IV45 518 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 SLC43A3Q8NBI5 491 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 GOLM1Q8NBJ4 401 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 GRIN3AQ8TCU5 1115 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 SREK1Q8WXA9 508 aaKnown RBP8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 KLHDC7BQ96G42 594 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 MIR1-1HGQ9H1L0 117 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 SUPT16HQ9Y5B9 1047 aaKnown RBP8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 PCDHB5Q9Y5E4 795 aa8.61□□□□□ -1.03
HERPUD1-208ENST00000563911 IGSF3O75054 1194 aa8.6□□□□□ -1.03
HERPUD1-208ENST00000563911 SETDB1Q15047 1291 aa8.6□□□□□ -1.03
HERPUD1-208ENST00000563911 WAPLQ7Z5K2 1190 aa8.6□□□□□ -1.03
HERPUD1-208ENST00000563911 KLHL23Q8NBE8 558 aa8.6□□□□□ -1.03
HERPUD1-208ENST00000563911 JARID2Q92833 1246 aaPredicted RBP8.6□□□□□ -1.03
HERPUD1-208ENST00000563911 KCNB2Q92953 911 aa8.6□□□□□ -1.03
HERPUD1-208ENST00000563911 GPRASP2Q96D09 838 aa8.6□□□□□ -1.03
HERPUD1-208ENST00000563911 CORO1BQ9BR76 489 aa8.6□□□□□ -1.03
HERPUD1-208ENST00000563911 ZC3H12CQ9C0D7 883 aaKnown RBP8.6□□□□□ -1.03
HERPUD1-208ENST00000563911 PPP1R1BQ9UD71 204 aaPredicted RBP8.6□□□□□ -1.03
HERPUD1-208ENST00000563911 LRP5O75197 1615 aa8.6□□□□□ -1.03
HERPUD1-208ENST00000563911 CLTCL1P53675 1640 aa8.6□□□□□ -1.03
HERPUD1-208ENST00000563911 GSTP1P09211 210 aaKnown RBP8.59□□□□□ -1.03
HERPUD1-208ENST00000563911 DNAJA1P31689 397 aaKnown RBP8.59□□□□□ -1.03
HERPUD1-208ENST00000563911 SUZ12Q15022 739 aaKnown RBP8.59□□□□□ -1.03
HERPUD1-208ENST00000563911 POU4F3Q15319 338 aa8.59□□□□□ -1.03
HERPUD1-208ENST00000563911 SF3A1Q15459 793 aaKnown RBP8.59□□□□□ -1.03
HERPUD1-208ENST00000563911 MAP1SQ66K74 1059 aaPredicted RBP8.59□□□□□ -1.03
HERPUD1-208ENST00000563911 MAP4K3Q8IVH8 894 aa8.59□□□□□ -1.03
HERPUD1-208ENST00000563911 TRIM42Q8IWZ5 723 aa8.59□□□□□ -1.03
HERPUD1-208ENST00000563911 DRC1Q96MC2 740 aa8.59□□□□□ -1.03
HERPUD1-208ENST00000563911 MARF1Q9Y4F3 1742 aaKnown RBP8.59□□□□□ -1.03
HERPUD1-208ENST00000563911 ROCK1Q13464 1354 aa8.59□□□□□ -1.03
HERPUD1-208ENST00000563911 PLEKHH1Q9ULM0 1364 aa8.59□□□□□ -1.03
HERPUD1-208ENST00000563911 PRAG1Q86YV5 1406 aa8.58□□□□□ -1.04
HERPUD1-208ENST00000563911 HOXB4P17483 251 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms