RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ZNF532Q9HCE3 1301 aa21.44■■□□□ 1.02
NME3-205ENST00000563854 SMARCA5O60264 1052 aaPredicted RBP21.43■■□□□ 1.02
NME3-205ENST00000563854 PABPC4Q13310 644 aaKnown RBP eCLIP21.43■■□□□ 1.02
NME3-205ENST00000563854 TMED8Q6PL24 325 aaPredicted RBP21.43■■□□□ 1.02
NME3-205ENST00000563854 METTL16Q86W50 562 aaKnown RBP21.43■■□□□ 1.02
NME3-205ENST00000563854 RIOK1Q9BRS2 568 aaKnown RBP21.43■■□□□ 1.02
NME3-205ENST00000563854 LRRCC1Q9C099 1032 aa21.43■■□□□ 1.02
NME3-205ENST00000563854 PAG1Q9NWQ8 432 aa21.43■■□□□ 1.02
NME3-205ENST00000563854 BIN2Q9UBW5 565 aaPredicted RBP21.43■■□□□ 1.02
NME3-205ENST00000563854 NAV1Q8NEY1 1877 aa21.43■■□□□ 1.02
NME3-205ENST00000563854 TNPO2O14787 897 aaKnown RBP21.42■■□□□ 1.02
NME3-205ENST00000563854 MGAMO43451 1857 aa21.42■■□□□ 1.02
NME3-205ENST00000563854 WDR18Q9BV38 432 aa21.42■■□□□ 1.02
NME3-205ENST00000563854 CRNKL1Q9BZJ0 848 aaKnown RBP21.42■■□□□ 1.02
NME3-205ENST00000563854 SERPINB13Q9UIV8 391 aa21.42■■□□□ 1.02
NME3-205ENST00000563854 GABRQQ9UN88 632 aa21.42■■□□□ 1.02
NME3-205ENST00000563854 GH2P01242 217 aa21.41■■□□□ 1.02
NME3-205ENST00000563854 POLR3DP05423 398 aaPredicted RBP21.41■■□□□ 1.02
NME3-205ENST00000563854 GRK4P32298 578 aa21.41■■□□□ 1.02
NME3-205ENST00000563854 BACE1P56817 501 aa21.41■■□□□ 1.02
NME3-205ENST00000563854 SH3D19Q5HYK7 790 aa21.41■■□□□ 1.02
NME3-205ENST00000563854 TTC6Q86TZ1 520 aa21.41■■□□□ 1.02
NME3-205ENST00000563854 ASCC2Q9H1I8 757 aaPredicted RBP21.41■■□□□ 1.02
NME3-205ENST00000563854 TAOK2Q9UL54 1235 aa21.41■■□□□ 1.02
NME3-205ENST00000563854 ATP5JP18859 108 aa21.4■■□□□ 1.02
NME3-205ENST00000563854 IRX3P78415 501 aaPredicted RBP21.4■■□□□ 1.02
NME3-205ENST00000563854 SLFNL1Q499Z3 407 aa21.4■■□□□ 1.02
NME3-205ENST00000563854 LCORLQ8N3X6 602 aa21.4■■□□□ 1.02
NME3-205ENST00000563854 DDX60LQ5H9U9 1706 aaKnown RBP21.39■■□□□ 1.01
NME3-205ENST00000563854 USP17L10C9JJH3 530 aa21.39■■□□□ 1.01
NME3-205ENST00000563854 MTFR1Q15390 333 aa21.39■■□□□ 1.01
NME3-205ENST00000563854 ZYXQ15942 572 aaKnown RBP21.39■■□□□ 1.01
NME3-205ENST00000563854 FAM110CQ1W6H9 321 aa21.39■■□□□ 1.01
NME3-205ENST00000563854 SDR42E1Q8WUS8 393 aa21.39■■□□□ 1.01
NME3-205ENST00000563854 FEZ1Q99689 392 aa21.39■■□□□ 1.01
NME3-205ENST00000563854 EHD4Q9H223 541 aa21.39■■□□□ 1.01
NME3-205ENST00000563854 ARMT1Q9H993 441 aa21.39■■□□□ 1.01
NME3-205ENST00000563854 GINM1Q9NU53 330 aa21.39■■□□□ 1.01
NME3-205ENST00000563854 MCM9Q9NXL9 1143 aa21.39■■□□□ 1.01
NME3-205ENST00000563854 TCRBV5S4A2TA0A5A2 114 aa21.38■■□□□ 1.01
NME3-205ENST00000563854 GCLCP48506 637 aaPredicted RBP21.38■■□□□ 1.01
NME3-205ENST00000563854 PLCD1P51178 756 aa21.38■■□□□ 1.01
NME3-205ENST00000563854 RAB3GAP1Q15042 981 aa21.38■■□□□ 1.01
NME3-205ENST00000563854 CERKLQ49MI3 558 aaPredicted RBP21.38■■□□□ 1.01
NME3-205ENST00000563854 PRPF38BQ5VTL8 546 aaKnown RBP21.38■■□□□ 1.01
NME3-205ENST00000563854 HAUS7Q99871 368 aa21.38■■□□□ 1.01
NME3-205ENST00000563854 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.38■■□□□ 1.015e-32■■■■□ 24.1
NME3-205ENST00000563854 C19orf81C9J6K1 198 aa21.37■■□□□ 1.01
NME3-205ENST00000563854 MBD4O95243 580 aa21.37■■□□□ 1.01
NME3-205ENST00000563854 ADD2P35612 726 aa21.37■■□□□ 1.01
NME3-205ENST00000563854 FLT3LGP49771 235 aa21.37■■□□□ 1.01
NME3-205ENST00000563854 ABCB5Q2M3G0 1257 aa21.37■■□□□ 1.01
NME3-205ENST00000563854 TATDN1Q6P1N9 297 aa21.37■■□□□ 1.01
NME3-205ENST00000563854 COA7Q96BR5 231 aa21.37■■□□□ 1.01
NME3-205ENST00000563854 YTHDC1Q96MU7 727 aaKnown RBP21.37■■□□□ 1.01
NME3-205ENST00000563854 KIAA0100Q14667 2235 aaKnown RBP21.37■■□□□ 1.01
NME3-205ENST00000563854 BRCA2P51587 3418 aa21.36■■□□□ 1.01
NME3-205ENST00000563854 ADCY3O60266 1144 aa21.36■■□□□ 1.01
NME3-205ENST00000563854 ELNP15502 786 aa21.36■■□□□ 1.01
NME3-205ENST00000563854 UBXN2AP68543 259 aa21.36■■□□□ 1.01
NME3-205ENST00000563854 EVX2Q03828 476 aa21.36■■□□□ 1.01
NME3-205ENST00000563854 SLAIN1Q8ND83 568 aa21.36■■□□□ 1.01
NME3-205ENST00000563854 CABP5Q9NP86 173 aa21.36■■□□□ 1.01
NME3-205ENST00000563854 MPHOSPH10O00566 681 aaKnown RBP21.35■■□□□ 1.01
NME3-205ENST00000563854 CHGBP05060 677 aa21.35■■□□□ 1.01
NME3-205ENST00000563854 CYP2D6P10635 497 aa21.35■■□□□ 1.01
NME3-205ENST00000563854 CCL5P13501 91 aa21.35■■□□□ 1.01
NME3-205ENST00000563854 USP17L2Q6R6M4 530 aa21.35■■□□□ 1.01
NME3-205ENST00000563854 DCP1AQ9NPI6 582 aaPredicted RBP21.35■■□□□ 1.01
NME3-205ENST00000563854 PRKAB2O43741 272 aa21.34■■□□□ 1.01
NME3-205ENST00000563854 PEX10O60683 326 aa21.34■■□□□ 1.01
NME3-205ENST00000563854 SHMT1P34896 483 aa21.34■■□□□ 1.01
NME3-205ENST00000563854 TSHZ3Q63HK5 1081 aa21.34■■□□□ 1.01
NME3-205ENST00000563854 P2RX7Q99572 595 aaKnown RBP21.34■■□□□ 1.01
NME3-205ENST00000563854 RNF208Q9H0X6 261 aa21.34■■□□□ 1.01
NME3-205ENST00000563854 ECHDC1Q9NTX5 307 aa21.34■■□□□ 1.01
NME3-205ENST00000563854 HERVK_113P62684 666 aa21.33■■□□□ 1.01
NME3-205ENST00000563854 GPATCH3Q96I76 525 aa21.33■■□□□ 1.01
NME3-205ENST00000563854 PAGR1Q9BTK6 254 aa21.33■■□□□ 1.01
NME3-205ENST00000563854 EMILIN3Q9NT22 766 aa21.33■■□□□ 1.01
NME3-205ENST00000563854 MYH7P12883 1935 aa21.32■■□□□ 1
NME3-205ENST00000563854 INHAP05111 366 aa21.32■■□□□ 1
NME3-205ENST00000563854 HOXA7P31268 230 aaPredicted RBP21.32■■□□□ 1
NME3-205ENST00000563854 RRP1P56182 461 aaKnown RBP21.32■■□□□ 1
NME3-205ENST00000563854 SLC44A5Q8NCS7 719 aa21.32■■□□□ 1
NME3-205ENST00000563854 ACER1Q8TDN7 264 aa21.32■■□□□ 1
NME3-205ENST00000563854 DCTPP1Q9H773 170 aa21.32■■□□□ 1
NME3-205ENST00000563854 MKI67P46013 3256 aaKnown RBP21.32■■□□□ 1
NME3-205ENST00000563854 GABPAQ06546 454 aa21.31■■□□□ 1
NME3-205ENST00000563854 SEPT2Q15019 361 aa21.31■■□□□ 1
NME3-205ENST00000563854 ZSCAN25Q6NSZ9 544 aa21.31■■□□□ 1
NME3-205ENST00000563854 DYNLL2Q96FJ2 89 aa21.31■■□□□ 1
NME3-205ENST00000563854 UNC93B1Q9H1C4 597 aa21.31■■□□□ 1
NME3-205ENST00000563854 MORF4L1Q9UBU8 362 aa21.31■■□□□ 1
NME3-205ENST00000563854 IRF5Q13568 498 aa21.3■■□□□ 1
NME3-205ENST00000563854 UBE3CQ15386 1083 aa21.3■■□□□ 1
NME3-205ENST00000563854 CCAR1Q8IX12 1150 aaKnown RBP21.3■■□□□ 1
NME3-205ENST00000563854 AMOTL1Q8IY63 956 aa21.3■■□□□ 1
NME3-205ENST00000563854 SHISA4Q96DD7 197 aa21.3■■□□□ 1
NME3-205ENST00000563854 DDRGK1Q96HY6 314 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms