RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 RLBP1P12271 317 aa6.08□□□□□ -1.44
HMGB1P33-201ENST00000563485 JUNBP17275 347 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P33-201ENST00000563485 TSNAXIP1Q2TAA8 658 aa6.08□□□□□ -1.44
HMGB1P33-201ENST00000563485 ANGEL2Q5VTE6 544 aaKnown RBP6.08□□□□□ -1.44
HMGB1P33-201ENST00000563485 LETMD1Q6P1Q0 360 aa6.08□□□□□ -1.44
HMGB1P33-201ENST00000563485 CRELD1Q96HD1 420 aa6.08□□□□□ -1.44
HMGB1P33-201ENST00000563485 DPH2Q9BQC3 489 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P33-201ENST00000563485 PRDM7Q9NQW5 492 aa6.08□□□□□ -1.44
HMGB1P33-201ENST00000563485 TJP2Q9UDY2 1190 aa6.08□□□□□ -1.44
HMGB1P33-201ENST00000563485 VTI1BQ9UEU0 232 aa6.08□□□□□ -1.44
HMGB1P33-201ENST00000563485 PITPNM2Q9BZ72 1349 aa6.07□□□□□ -1.44
HMGB1P33-201ENST00000563485 PGRP06401 933 aa6.07□□□□□ -1.44
HMGB1P33-201ENST00000563485 CLCN7P51798 805 aa6.07□□□□□ -1.44
HMGB1P33-201ENST00000563485 RPL6Q02878 288 aaKnown RBP6.07□□□□□ -1.44
HMGB1P33-201ENST00000563485 IKZF1Q13422 519 aa6.07□□□□□ -1.44
HMGB1P33-201ENST00000563485 SFRP5Q5T4F7 317 aa6.07□□□□□ -1.44
HMGB1P33-201ENST00000563485 LRRN4CLQ8ND94 238 aa6.07□□□□□ -1.44
HMGB1P33-201ENST00000563485 ASB11Q8WXH4 323 aa6.07□□□□□ -1.44
HMGB1P33-201ENST00000563485 TACC3Q9Y6A5 838 aa6.07□□□□□ -1.44
HMGB1P33-201ENST00000563485 ERCC3P19447 782 aa6.06□□□□□ -1.44
HMGB1P33-201ENST00000563485 LCE3BQ5TA77 95 aa6.06□□□□□ -1.44
HMGB1P33-201ENST00000563485 CDKAL1Q5VV42 579 aa6.06□□□□□ -1.44
HMGB1P33-201ENST00000563485 BNC2Q6ZN30 1099 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P33-201ENST00000563485 KRTAP1-3Q8IUG1 177 aa6.06□□□□□ -1.44
HMGB1P33-201ENST00000563485 MRPL41Q8IXM3 137 aaKnown RBP6.06□□□□□ -1.44
HMGB1P33-201ENST00000563485 MFSD4AQ8N468 514 aa6.06□□□□□ -1.44
HMGB1P33-201ENST00000563485 ASIC4Q96FT7 647 aa6.06□□□□□ -1.44
HMGB1P33-201ENST00000563485 TMEM87BQ96K49 555 aa6.06□□□□□ -1.44
HMGB1P33-201ENST00000563485 MRS2Q9HD23 443 aa6.06□□□□□ -1.44
HMGB1P33-201ENST00000563485 FAM155AB1AL88 458 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P33-201ENST00000563485 PF4P02776 101 aa6.05□□□□□ -1.44
HMGB1P33-201ENST00000563485 ZNF865P0CJ78 1059 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P33-201ENST00000563485 ZP2Q05996 745 aa6.05□□□□□ -1.44
HMGB1P33-201ENST00000563485 CAMK2GQ13555 558 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P33-201ENST00000563485 SLC23A3Q6PIS1 610 aa6.05□□□□□ -1.44
HMGB1P33-201ENST00000563485 C22orf34Q6ZV56 151 aa6.05□□□□□ -1.44
HMGB1P33-201ENST00000563485 CDH24Q86UP0 819 aa6.05□□□□□ -1.44
HMGB1P33-201ENST00000563485 ACSF2Q96CM8 615 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P33-201ENST00000563485 HSPA12BQ96MM6 686 aa6.05□□□□□ -1.44
HMGB1P33-201ENST00000563485 SEMA3GQ9NS98 782 aa6.05□□□□□ -1.44
HMGB1P33-201ENST00000563485 CORINQ9Y5Q5 1042 aa6.05□□□□□ -1.44
HMGB1P33-201ENST00000563485 CAPN6Q9Y6Q1 641 aa6.05□□□□□ -1.44
HMGB1P33-201ENST00000563485 H3BS24 57 aa6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 BIN1O00499 593 aa6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 CILPO75339 1184 aa6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 CBX7O95931 251 aa6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 F13A1P00488 732 aa6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 LMNB2Q03252 620 aa6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 PDE4BQ07343 736 aa6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 SLC6A19Q695T7 634 aa6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 OGFOD2Q6N063 350 aa6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 ATG4DQ86TL0 474 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 RHOVQ96L33 236 aa6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 ATP13A1Q9HD20 1204 aa6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 ST14Q9Y5Y6 855 aa6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 CARMIL2Q6F5E8 1435 aa6.04□□□□□ -1.44
HMGB1P33-201ENST00000563485 FAM221AA4D161 298 aa6.03□□□□□ -1.44
HMGB1P33-201ENST00000563485 GBP2P32456 591 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P33-201ENST00000563485 FAM160A1Q05DH4 1040 aa6.03□□□□□ -1.44
HMGB1P33-201ENST00000563485 ZNF746Q6NUN9 644 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P33-201ENST00000563485 CCDC84Q86UT8 332 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P33-201ENST00000563485 MCATQ8IVS2 390 aaKnown RBP6.03□□□□□ -1.44
HMGB1P33-201ENST00000563485 TMEM74Q96NL1 305 aa6.03□□□□□ -1.44
HMGB1P33-201ENST00000563485 ADAM30Q9UKF2 790 aa6.03□□□□□ -1.44
HMGB1P33-201ENST00000563485 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P33-201ENST00000563485 UPK3BL1B0FP48 263 aa6.02□□□□□ -1.45
HMGB1P33-201ENST00000563485 UPK3BL2E5RIL1 263 aa6.02□□□□□ -1.45
HMGB1P33-201ENST00000563485 BPNT1O95861 308 aa6.02□□□□□ -1.45
HMGB1P33-201ENST00000563485 PLCG1P19174 1290 aa6.02□□□□□ -1.45
HMGB1P33-201ENST00000563485 RELL1Q8IUW5 271 aa6.02□□□□□ -1.45
HMGB1P33-201ENST00000563485 DNAJB8Q8NHS0 232 aa6.02□□□□□ -1.45
HMGB1P33-201ENST00000563485 GATAD2BQ8WXI9 593 aa6.02□□□□□ -1.45
HMGB1P33-201ENST00000563485 FAM168AQ92567 244 aa6.02□□□□□ -1.45
HMGB1P33-201ENST00000563485 RSRP1Q9BUV0 290 aa6.02□□□□□ -1.45
HMGB1P33-201ENST00000563485 CARS2Q9HA77 564 aaKnown RBP6.02□□□□□ -1.45
HMGB1P33-201ENST00000563485 MINDY4BA8MYZ0 360 aa6.01□□□□□ -1.45
HMGB1P33-201ENST00000563485 CYP7A1P22680 504 aa6.01□□□□□ -1.45
HMGB1P33-201ENST00000563485 TNK2Q07912 1038 aa6.01□□□□□ -1.45
HMGB1P33-201ENST00000563485 DIEXFQ68CQ4 756 aaKnown RBP6.01□□□□□ -1.45
HMGB1P33-201ENST00000563485 FAM13CQ8NE31 585 aa6.01□□□□□ -1.45
HMGB1P33-201ENST00000563485 FLAD1Q8NFF5 587 aa6.01□□□□□ -1.45
HMGB1P33-201ENST00000563485 GIPC2Q8TF65 315 aa6.01□□□□□ -1.45
HMGB1P33-201ENST00000563485 BCL2L13Q9BXK5 485 aa6.01□□□□□ -1.45
HMGB1P33-201ENST00000563485 POLR3KQ9Y2Y1 108 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P33-201ENST00000563485 GRIN3BO60391 1043 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 GARTP22102 1010 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 ETV3P41162 512 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 KIR3DL1P43629 444 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 PWP1Q13610 501 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 SNAP47Q5SQN1 464 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 GOLM1Q8NBJ4 401 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 FBXO27Q8NI29 283 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 PPP1R13LQ8WUF5 828 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 UBE2FQ969M7 185 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 COX4I2Q96KJ9 171 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 Q96M66 194 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 COPRSQ9NQ92 184 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 KBTBD4Q9NVX7 518 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 LMCD1Q9NZU5 365 aa6□□□□□ -1.45
HMGB1P33-201ENST00000563485 ZSWIM5Q9P217 1185 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms