RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 GRM2Q14416 872 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 FXNQ16595 210 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 SLC4A8Q2Y0W8 1093 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 GFOD2Q3B7J2 385 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 SEZ6Q53EL9 994 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 ANO1Q5XXA6 986 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 HDGFL2Q7Z4V5 671 aaPredicted RBP6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 ALDH16A1Q8IZ83 802 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 SDR16C5Q8N3Y7 309 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 MAGEB6Q8N7X4 407 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 TEX19Q8NA77 164 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 PHC3Q8NDX5 983 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 C3orf58Q8NDZ4 430 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 VPS37AQ8NEZ2 397 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 PLD4Q96BZ4 506 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 COL25A1Q9BXS0 654 aaPredicted RBP6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 NIFKQ9BYG3 293 aaKnown RBP6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 FHDC1Q9C0D6 1143 aaPredicted RBP6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 ZFYVE28Q9HCC9 887 aa6.44□□□□□ -1.38
VPS35P1-201ENST00000563400 RTEL1-TNFRSF6BF6WH68 1400 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 GPATCH8Q9UKJ3 1502 aaKnown RBP6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 VSTM5A8MXK1 200 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 PIP5K1CO60331 668 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 PHKA2P46019 1235 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 WWC2Q6AWC2 1192 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 NXNQ6DKJ4 435 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 MORC1Q86VD1 984 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 SLITRK4Q8IW52 837 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 ANKRD42Q8N9B4 389 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 CXorf38Q8TB03 319 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 CNTNAP3BQ96NU0 1288 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 CNTNAP3Q9BZ76 1288 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 TRIM8Q9BZR9 551 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 NGRNQ9NPE2 291 aaKnown RBP6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 OBP2AQ9NY56 170 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 USP25Q9UHP3 1055 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 ZNF180Q9UJW8 692 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 KANK1Q14678 1352 aa6.43□□□□□ -1.38
VPS35P1-201ENST00000563400 KDM6BO15054 1643 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 MAP3K4Q9Y6R4 1608 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 GOLGA6CA6NDK9 693 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 GOLGA6BA6NDN3 693 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 ANP32CO43423 234 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 DDAH1O94760 285 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 GOLGA6DP0CG33 693 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 EPB42P16452 691 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 GSTT1P30711 240 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 HNRNPMP52272 730 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 TCIRG1Q13488 830 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 LBRQ14739 615 aaKnown RBP6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 SETDB1Q15047 1291 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 C4orf17Q53FE4 359 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 EFHC2Q5JST6 749 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 SNAP47Q5SQN1 464 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 CCDC70Q6NSX1 233 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 CREBRFQ8IUR6 639 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 DRC7Q8IY82 874 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 GPR161Q8N6U8 529 aaKnown RBP6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 ZSWIM2Q8NEG5 633 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 FBXO27Q8NI29 283 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 CDC5LQ99459 802 aaKnown RBP6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 TARS2Q9BW92 718 aaKnown RBP6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 NUCKS1Q9H1E3 243 aaKnown RBP6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 GOLGA6AQ9NYA3 693 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 ANKIB1Q9P2G1 1089 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 NSFL1CQ9UNZ2 370 aaKnown RBP6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 MYO5CQ9NQX4 1742 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 RPGRIP1LQ68CZ1 1315 aa6.42□□□□□ -1.38
VPS35P1-201ENST00000563400 EML1O00423 815 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 CDK2AP1O14519 115 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 TCERG1O14776 1098 aaKnown RBP6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 TLR3O15455 904 aaKnown RBP6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 RNASEH2AO75792 299 aaKnown RBP6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 RAPGEF3O95398 923 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 PGRP06401 933 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 TRIM27P14373 513 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 HALP42357 657 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 PPM1FP49593 454 aaPredicted RBP6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 PURAQ00577 322 aaKnown RBP6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 CAMK2GQ13555 558 aaPredicted RBP6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 MTFR1Q15390 333 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 NBPF1Q3BBV0 1214 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 ALFQ53S48 1182 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 POTEAQ6S8J7 498 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 SMAP1Q8IYB5 467 aaPredicted RBP6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 CPXCR1Q8N123 301 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 RIN3Q8TB24 985 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 ZNF837Q96EG3 531 aaPredicted RBP6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 SLC5A4Q9NY91 659 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 PUF60Q9UHX1 559 aaKnown RBP6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 KCNG1Q9UIX4 513 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 PHF24Q9UPV7 400 aa6.41□□□□□ -1.38
VPS35P1-201ENST00000563400 PRSS47A8MTI9 375 aa6.4□□□□□ -1.38
VPS35P1-201ENST00000563400 MICAL2O94851 1124 aa6.4□□□□□ -1.38
VPS35P1-201ENST00000563400 NBPF7P0C2Y1 421 aaPredicted RBP6.4□□□□□ -1.38
VPS35P1-201ENST00000563400 PLA2G4AP47712 749 aa6.4□□□□□ -1.38
VPS35P1-201ENST00000563400 PPP2R5EQ16537 467 aa6.4□□□□□ -1.38
VPS35P1-201ENST00000563400 DBN1Q16643 649 aa6.4□□□□□ -1.38
VPS35P1-201ENST00000563400 RTN1Q16799 776 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms