RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 FKBP1AP62942 108 aaKnown RBP11.42□□□□□ -0.58
UBFD1-202ENST00000563366 EXOSC10Q01780 885 aaKnown RBP11.42□□□□□ -0.58
UBFD1-202ENST00000563366 TOB2Q14106 344 aaPredicted RBP11.42□□□□□ -0.58
UBFD1-202ENST00000563366 SART3Q15020 963 aaKnown RBP11.42□□□□□ -0.58
UBFD1-202ENST00000563366 RAB3GAP1Q15042 981 aa11.42□□□□□ -0.58
UBFD1-202ENST00000563366 CCDC93Q567U6 631 aa11.42□□□□□ -0.58
UBFD1-202ENST00000563366 MFSD6Q6ZSS7 791 aa11.42□□□□□ -0.58
UBFD1-202ENST00000563366 Q6ZUG5 572 aa11.42□□□□□ -0.58
UBFD1-202ENST00000563366 ADGRA1Q86SQ6 560 aa11.42□□□□□ -0.58
UBFD1-202ENST00000563366 STAG1Q8WVM7 1258 aa11.42□□□□□ -0.58
UBFD1-202ENST00000563366 TMEM87BQ96K49 555 aa11.42□□□□□ -0.58
UBFD1-202ENST00000563366 SMC3Q9UQE7 1217 aa11.42□□□□□ -0.58
UBFD1-202ENST00000563366 KIF3AQ9Y496 699 aa11.42□□□□□ -0.58
UBFD1-202ENST00000563366 SNED1Q8TER0 1413 aa11.42□□□□□ -0.58
UBFD1-202ENST00000563366 ZNF646O15015 1829 aaPredicted RBP11.42□□□□□ -0.58
UBFD1-202ENST00000563366 ECM29Q5VYK3 1845 aa11.42□□□□□ -0.58
UBFD1-202ENST00000563366 DDX60LQ5H9U9 1706 aaKnown RBP11.41□□□□□ -0.58
UBFD1-202ENST00000563366 BHMG1C9JSJ3 638 aaPredicted RBP11.41□□□□□ -0.58
UBFD1-202ENST00000563366 PRC1O43663 620 aa11.41□□□□□ -0.58
UBFD1-202ENST00000563366 DHX16O60231 1041 aaKnown RBP11.41□□□□□ -0.58
UBFD1-202ENST00000563366 PDCP20941 246 aa11.41□□□□□ -0.58
UBFD1-202ENST00000563366 CHRNA5P30532 468 aa11.41□□□□□ -0.58
UBFD1-202ENST00000563366 AKNAD1Q5T1N1 836 aa11.41□□□□□ -0.58
UBFD1-202ENST00000563366 ADGRD1Q6QNK2 874 aa11.41□□□□□ -0.58
UBFD1-202ENST00000563366 MB21D2Q8IYB1 491 aaPredicted RBP11.41□□□□□ -0.58
UBFD1-202ENST00000563366 C7orf43Q8WVR3 580 aa11.41□□□□□ -0.58
UBFD1-202ENST00000563366 ZNF274Q96GC6 653 aaPredicted RBP11.41□□□□□ -0.58
UBFD1-202ENST00000563366 GPR101Q96P66 508 aaPredicted RBP11.41□□□□□ -0.58
UBFD1-202ENST00000563366 PSMD1Q99460 953 aa11.41□□□□□ -0.58
UBFD1-202ENST00000563366 ANP32EQ9BTT0 268 aa11.41□□□□□ -0.58
UBFD1-202ENST00000563366 AATFQ9NY61 560 aaKnown RBP eCLIP11.41□□□□□ -0.58
UBFD1-202ENST00000563366 TAF6LQ9Y6J9 622 aa11.41□□□□□ -0.58
UBFD1-202ENST00000563366 WDR33Q9C0J8 1336 aaKnown RBP11.4□□□□□ -0.58
UBFD1-202ENST00000563366 ERICH2A1L162 156 aa11.4□□□□□ -0.58
UBFD1-202ENST00000563366 GOLGA6L22H0YM25 854 aa11.4□□□□□ -0.58
UBFD1-202ENST00000563366 EVCP57679 992 aa11.4□□□□□ -0.58
UBFD1-202ENST00000563366 GTF2IP78347 998 aa11.4□□□□□ -0.58
UBFD1-202ENST00000563366 PPARAQ07869 468 aa11.4□□□□□ -0.58
UBFD1-202ENST00000563366 KIAA2012Q0VF49 1180 aa11.4□□□□□ -0.58
UBFD1-202ENST00000563366 ME3Q16798 604 aa11.4□□□□□ -0.58
UBFD1-202ENST00000563366 SBK1Q52WX2 424 aa11.4□□□□□ -0.58
UBFD1-202ENST00000563366 SAMD7Q7Z3H4 446 aa11.4□□□□□ -0.58
UBFD1-202ENST00000563366 ZNF384Q8TF68 577 aa11.4□□□□□ -0.58
UBFD1-202ENST00000563366 BRF1Q92994 677 aa11.4□□□□□ -0.58
UBFD1-202ENST00000563366 LLPHQ9BRT6 129 aaKnown RBP11.4□□□□□ -0.58
UBFD1-202ENST00000563366 PDGFDQ9GZP0 370 aaPredicted RBP11.4□□□□□ -0.58
UBFD1-202ENST00000563366 MYH1P12882 1939 aa11.4□□□□□ -0.58
UBFD1-202ENST00000563366 GAKO14976 1311 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 MYO3BQ8WXR4 1341 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 GPR75-ASB3A0A0A6YYF3 556 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 PRKAB2O43741 272 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 KDM4AO75164 1064 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 GCGRP47871 477 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 DYNLL1P63167 89 aaKnown RBP11.39□□□□□ -0.59
UBFD1-202ENST00000563366 NFKBIBQ15653 356 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 FER1L6Q2WGJ9 1857 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 STRIP1Q5VSL9 837 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 TBC1D10CQ8IV04 446 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 CCDC83Q8IWF9 413 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 TMTC2Q8N394 836 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 SDR42E1Q8WUS8 393 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 ESR2Q92731 530 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 GTF3C6Q969F1 213 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 ZNF287Q9HBT7 754 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 PIM2Q9P1W9 311 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 TPCN1Q9ULQ1 816 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 ANGEL1Q9UNK9 670 aaKnown RBP11.39□□□□□ -0.59
UBFD1-202ENST00000563366 ARFGEF1Q9Y6D6 1849 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 MYH8P13535 1937 aa11.39□□□□□ -0.59
UBFD1-202ENST00000563366 PFKFB2O60825 505 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 RNF40O75150 1001 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 ZBTB7AO95365 584 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 SLC10A3P09131 477 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 LIFRP42702 1097 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 USP5P45974 858 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 HMGN5P82970 282 aaKnown RBP11.38□□□□□ -0.59
UBFD1-202ENST00000563366 HDLBPQ00341 1268 aaKnown RBP11.38□□□□□ -0.59
UBFD1-202ENST00000563366 PDE4BQ07343 736 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 CLEC17AQ6ZS10 378 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 SLC51AQ86UW1 340 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 ZFRQ96KR1 1074 aaKnown RBP11.38□□□□□ -0.59
UBFD1-202ENST00000563366 TCEANC2Q96MN5 208 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.38□□□□□ -0.59
UBFD1-202ENST00000563366 MRIQ9BWK5 157 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 DCP1AQ9NPI6 582 aaPredicted RBP11.38□□□□□ -0.59
UBFD1-202ENST00000563366 JAG2Q9Y219 1238 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 CD2APQ9Y5K6 639 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 ATP6V1DQ9Y5K8 247 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 ROBO3Q96MS0 1386 aa11.38□□□□□ -0.59
UBFD1-202ENST00000563366 SCN9AQ15858 1988 aa11.37□□□□□ -0.59
UBFD1-202ENST00000563366 NEDD4P46934 1319 aa11.37□□□□□ -0.59
UBFD1-202ENST00000563366 USP17L3A6NCW0 530 aa11.37□□□□□ -0.59
UBFD1-202ENST00000563366 USP17L4A6NCW7 530 aa11.37□□□□□ -0.59
UBFD1-202ENST00000563366 MINDY4BA8MYZ0 360 aa11.37□□□□□ -0.59
UBFD1-202ENST00000563366 PPIP5K2O43314 1243 aa11.37□□□□□ -0.59
UBFD1-202ENST00000563366 C21orf2O43822 256 aa11.37□□□□□ -0.59
UBFD1-202ENST00000563366 ECE2O60344 883 aa11.37□□□□□ -0.59
UBFD1-202ENST00000563366 LARGE1O95461 756 aa11.37□□□□□ -0.59
UBFD1-202ENST00000563366 DPEP1P16444 411 aa11.37□□□□□ -0.59
UBFD1-202ENST00000563366 BTDP43251 543 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms