RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 MMP10P09238 476 aa22.13■■□□□ 1.13
SMPD3-203ENST00000563226 BTDP43251 543 aa22.13■■□□□ 1.13
SMPD3-203ENST00000563226 NDUFA8P51970 172 aa22.13■■□□□ 1.13
SMPD3-203ENST00000563226 PDE4BQ07343 736 aa22.13■■□□□ 1.13
SMPD3-203ENST00000563226 MFSD14BQ5SR56 506 aa22.13■■□□□ 1.13
SMPD3-203ENST00000563226 AXDND1Q5T1B0 1012 aaPredicted RBP22.13■■□□□ 1.13
SMPD3-203ENST00000563226 MSL1Q68DK7 614 aa22.13■■□□□ 1.13
SMPD3-203ENST00000563226 MAP3K14Q99558 947 aa22.13■■□□□ 1.13
SMPD3-203ENST00000563226 ATP6V0A2Q9Y487 856 aa22.13■■□□□ 1.13
SMPD3-203ENST00000563226 hCG_1642624A0A1W2PR95 340 aa22.13■■□□□ 1.13
SMPD3-203ENST00000563226 RIMBP2O15034 1052 aa22.13■■□□□ 1.13
SMPD3-203ENST00000563226 WDHD1O75717 1129 aaPredicted RBP22.13■■□□□ 1.13
SMPD3-203ENST00000563226 MARCKSP29966 332 aaPredicted RBP22.13■■□□□ 1.13
SMPD3-203ENST00000563226 SLC39A14Q15043 492 aa22.13■■□□□ 1.13
SMPD3-203ENST00000563226 MAPKAPK5Q8IW41 473 aa22.13■■□□□ 1.13
SMPD3-203ENST00000563226 DIS3L2Q8IYB7 885 aaKnown RBP22.13■■□□□ 1.13
SMPD3-203ENST00000563226 FAM200AQ8TCP9 573 aa22.13■■□□□ 1.13
SMPD3-203ENST00000563226 DDX60LQ5H9U9 1706 aaKnown RBP22.12■■□□□ 1.13
SMPD3-203ENST00000563226 TSPY2A6NKD2 308 aa22.12■■□□□ 1.13
SMPD3-203ENST00000563226 KINO60870 393 aaKnown RBP22.12■■□□□ 1.13
SMPD3-203ENST00000563226 LDHCP07864 332 aa22.12■■□□□ 1.13
SMPD3-203ENST00000563226 PTPAQ15257 358 aa22.12■■□□□ 1.13
SMPD3-203ENST00000563226 NOL10Q9BSC4 688 aaKnown RBP22.12■■□□□ 1.13
SMPD3-203ENST00000563226 RNF26Q9BY78 433 aaPredicted RBP22.12■■□□□ 1.13
SMPD3-203ENST00000563226 PKN1Q16512 942 aa22.11■■□□□ 1.13
SMPD3-203ENST00000563226 RCSD1Q6JBY9 416 aa22.11■■□□□ 1.13
SMPD3-203ENST00000563226 SAP30BPQ9UHR5 308 aaKnown RBP22.11■■□□□ 1.13
SMPD3-203ENST00000563226 ROBO3Q96MS0 1386 aa22.11■■□□□ 1.13
SMPD3-203ENST00000563226 DDAH1O94760 285 aa22.11■■□□□ 1.13
SMPD3-203ENST00000563226 ADCY5O95622 1261 aa22.11■■□□□ 1.13
SMPD3-203ENST00000563226 HMGB2P26583 209 aaKnown RBP22.11■■□□□ 1.13
SMPD3-203ENST00000563226 PPP2R5BQ15173 497 aa22.11■■□□□ 1.13
SMPD3-203ENST00000563226 SASS6Q6UVJ0 657 aa22.11■■□□□ 1.13
SMPD3-203ENST00000563226 TMC4Q7Z404 712 aa22.11■■□□□ 1.13
SMPD3-203ENST00000563226 LUZP1Q86V48 1076 aa22.11■■□□□ 1.13
SMPD3-203ENST00000563226 NOSTRINQ8IVI9 506 aa22.11■■□□□ 1.13
SMPD3-203ENST00000563226 GPR75-ASB3A0A0A6YYF3 556 aa22.1■■□□□ 1.13
SMPD3-203ENST00000563226 PLCD1P51178 756 aa22.1■■□□□ 1.13
SMPD3-203ENST00000563226 NR5A1Q13285 461 aa22.1■■□□□ 1.13
SMPD3-203ENST00000563226 SLC44A5Q8NCS7 719 aa22.1■■□□□ 1.13
SMPD3-203ENST00000563226 OXER1Q8TDS5 423 aa22.1■■□□□ 1.13
SMPD3-203ENST00000563226 ERCC4Q92889 916 aaPredicted RBP22.1■■□□□ 1.13
SMPD3-203ENST00000563226 DNAJC25Q9H1X3 360 aa22.1■■□□□ 1.13
SMPD3-203ENST00000563226 CBX8Q9HC52 389 aa22.1■■□□□ 1.13
SMPD3-203ENST00000563226 NPR1P16066 1061 aa22.1■■□□□ 1.13
SMPD3-203ENST00000563226 RXRBP28702 533 aa22.1■■□□□ 1.13
SMPD3-203ENST00000563226 GTF2IP78347 998 aa22.1■■□□□ 1.13
SMPD3-203ENST00000563226 TFAP4Q01664 338 aa22.1■■□□□ 1.13
SMPD3-203ENST00000563226 HS1BP3Q53T59 392 aa22.1■■□□□ 1.13
SMPD3-203ENST00000563226 TMTC3Q6ZXV5 915 aa22.1■■□□□ 1.13
SMPD3-203ENST00000563226 RBM28Q9NW13 759 aaKnown RBP22.1■■□□□ 1.13
SMPD3-203ENST00000563226 BAZ2BQ9UIF8 2168 aaKnown RBP22.09■■□□□ 1.13
SMPD3-203ENST00000563226 FAM205AQ6ZU69 1335 aa22.09■■□□□ 1.13
SMPD3-203ENST00000563226 A0A087WWV3 80 aa22.09■■□□□ 1.13
SMPD3-203ENST00000563226 CTAGE5O15320 804 aa22.09■■□□□ 1.13
SMPD3-203ENST00000563226 CALM1P0DP23 149 aa22.09■■□□□ 1.13
SMPD3-203ENST00000563226 CALM2P0DP24 149 aa22.09■■□□□ 1.13
SMPD3-203ENST00000563226 CALM3P0DP25 149 aa22.09■■□□□ 1.13
SMPD3-203ENST00000563226 TOB1P50616 345 aaPredicted RBP22.09■■□□□ 1.13
SMPD3-203ENST00000563226 ZSCAN30Q86W11 494 aa22.09■■□□□ 1.13
SMPD3-203ENST00000563226 IL17RBQ9NRM6 502 aa22.09■■□□□ 1.13
SMPD3-203ENST00000563226 VPS54Q9P1Q0 977 aa22.09■■□□□ 1.13
SMPD3-203ENST00000563226 CNTNAP5Q8WYK1 1306 aa22.08■■□□□ 1.13
SMPD3-203ENST00000563226 SAFBQ15424 915 aaKnown RBP eCLIP22.08■■□□□ 1.13
SMPD3-203ENST00000563226 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.08■■□□□ 1.13
SMPD3-203ENST00000563226 PARP3Q9Y6F1 533 aa22.08■■□□□ 1.13
SMPD3-203ENST00000563226 V9GY48 417 aaPredicted RBP22.08■■□□□ 1.13
SMPD3-203ENST00000563226 MYH1P12882 1939 aa22.08■■□□□ 1.13
SMPD3-203ENST00000563226 PRPF3O43395 683 aaKnown RBP22.08■■□□□ 1.12
SMPD3-203ENST00000563226 CLCN1P35523 988 aa22.08■■□□□ 1.12
SMPD3-203ENST00000563226 RHBDL3P58872 404 aa22.08■■□□□ 1.12
SMPD3-203ENST00000563226 PLCB2Q00722 1185 aa22.08■■□□□ 1.12
SMPD3-203ENST00000563226 TEX11Q8IYF3 940 aa22.08■■□□□ 1.12
SMPD3-203ENST00000563226 SRBD1Q8N5C6 995 aaKnown RBP22.08■■□□□ 1.12
SMPD3-203ENST00000563226 TBC1D22AQ8WUA7 517 aa22.08■■□□□ 1.12
SMPD3-203ENST00000563226 FOXP1Q9H334 677 aaPredicted RBP22.08■■□□□ 1.12
SMPD3-203ENST00000563226 FOCADQ5VW36 1801 aa22.07■■□□□ 1.12
SMPD3-203ENST00000563226 GAKO14976 1311 aa22.07■■□□□ 1.12
SMPD3-203ENST00000563226 PFKFB1P16118 471 aa22.07■■□□□ 1.12
SMPD3-203ENST00000563226 AKAP17AQ02040 695 aaKnown RBP22.07■■□□□ 1.12
SMPD3-203ENST00000563226 FLAD1Q8NFF5 587 aa22.07■■□□□ 1.12
SMPD3-203ENST00000563226 PPP6R2O75170 966 aa22.07■■□□□ 1.12
SMPD3-203ENST00000563226 CMA1P23946 247 aa22.07■■□□□ 1.12
SMPD3-203ENST00000563226 MPNDQ8N594 471 aa22.07■■□□□ 1.12
SMPD3-203ENST00000563226 CLIC6Q96NY7 704 aa22.07■■□□□ 1.12
SMPD3-203ENST00000563226 MKNK2Q9HBH9 465 aa22.07■■□□□ 1.12
SMPD3-203ENST00000563226 FLT1P17948 1338 aa22.06■■□□□ 1.12
SMPD3-203ENST00000563226 USP17L3A6NCW0 530 aa22.06■■□□□ 1.12
SMPD3-203ENST00000563226 USP17L4A6NCW7 530 aa22.06■■□□□ 1.12
SMPD3-203ENST00000563226 PDE6BP35913 854 aa22.06■■□□□ 1.12
SMPD3-203ENST00000563226 SHC4Q6S5L8 630 aa22.06■■□□□ 1.12
SMPD3-203ENST00000563226 C11orf57Q6ZUT1 292 aaPredicted RBP22.06■■□□□ 1.12
SMPD3-203ENST00000563226 USP17L1Q7RTZ2 530 aa22.06■■□□□ 1.12
SMPD3-203ENST00000563226 CTCFLQ8NI51 663 aaPredicted RBP22.06■■□□□ 1.12
SMPD3-203ENST00000563226 FBXW7Q969H0 707 aa22.06■■□□□ 1.12
SMPD3-203ENST00000563226 FAM163AQ96GL9 167 aaPredicted RBP22.06■■□□□ 1.12
SMPD3-203ENST00000563226 COA1Q9GZY4 146 aa22.06■■□□□ 1.12
SMPD3-203ENST00000563226 CCDC39Q9UFE4 941 aa22.06■■□□□ 1.12
SMPD3-203ENST00000563226 ADAMTSL1Q8N6G6 1762 aa22.06■■□□□ 1.12
SMPD3-203ENST00000563226 AMOTL1Q8IY63 956 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms