RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.38	□□□□□ -0.75
CKLF-208	ENST00000563092	GNL3L	Q9NVN8	582 aa	Known RBP	10.38	□□□□□ -0.75
CKLF-208	ENST00000563092	DNAH12	Q6ZR08	3092 aa		10.37	□□□□□ -0.75
CKLF-208	ENST00000563092	MROH7-TTC4	A0A0A0MT08	1334 aa		10.37	□□□□□ -0.75
CKLF-208	ENST00000563092	MUC3A	Q02505	3323 aa		10.37	□□□□□ -0.75
CKLF-208	ENST00000563092	MAP4K4	O95819	1239 aa	Predicted RBP	10.37	□□□□□ -0.75
CKLF-208	ENST00000563092	HOXA7	P31268	230 aa	Predicted RBP	10.37	□□□□□ -0.75
CKLF-208	ENST00000563092	CAP2	P40123	477 aa		10.37	□□□□□ -0.75
CKLF-208	ENST00000563092	SPP2	Q13103	211 aa		10.37	□□□□□ -0.75
CKLF-208	ENST00000563092	RRP1B	Q14684	758 aa	Known RBP	10.37	□□□□□ -0.75
CKLF-208	ENST00000563092	CCDC102B	Q68D86	513 aa		10.37	□□□□□ -0.75
CKLF-208	ENST00000563092	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	10.37	□□□□□ -0.75
CKLF-208	ENST00000563092	UBE2O	Q9C0C9	1292 aa	Known RBP	10.37	□□□□□ -0.75
CKLF-208	ENST00000563092	CDH23	Q9H251	3354 aa		10.37	□□□□□ -0.75
CKLF-208	ENST00000563092	BTD	P43251	543 aa		10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	HMGCS2	P54868	508 aa		10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.36	□□□□□ -0.75	9e-11	■■□□□ 12.1
CKLF-208	ENST00000563092	RASGRF1	Q13972	1273 aa		10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	LRRC26	Q2I0M4	334 aa		10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	POTEE	Q6S8J3	1075 aa		10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	SLF2	Q8IX21	1173 aa		10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	MARVELD3	Q96A59	401 aa		10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	WDR18	Q9BV38	432 aa		10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	TXNRD2	Q9NNW7	524 aa		10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	CEP126	Q9P2H0	1117 aa		10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	TAOK2	Q9UL54	1235 aa		10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	SALL2	Q9Y467	1007 aa	Predicted RBP	10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	AK9	Q5TCS8	1911 aa		10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	MYH2	Q9UKX2	1941 aa		10.36	□□□□□ -0.75
CKLF-208	ENST00000563092	PRUNE2	Q8WUY3	3088 aa		10.35	□□□□□ -0.75
CKLF-208	ENST00000563092	USP17L5	A8MUK1	530 aa		10.35	□□□□□ -0.75
CKLF-208	ENST00000563092	ADORA1	P30542	326 aa		10.35	□□□□□ -0.75
CKLF-208	ENST00000563092	IL15	P40933	162 aa	Predicted RBP	10.35	□□□□□ -0.75
CKLF-208	ENST00000563092	MECOM	Q03112	1051 aa		10.35	□□□□□ -0.75
CKLF-208	ENST00000563092	CACNB2	Q08289	660 aa	Predicted RBP	10.35	□□□□□ -0.75
CKLF-208	ENST00000563092	PDAP1	Q13442	181 aa	Known RBP	10.35	□□□□□ -0.75
CKLF-208	ENST00000563092	MORN1	Q5T089	497 aa		10.35	□□□□□ -0.75
CKLF-208	ENST00000563092	METTL16	Q86W50	562 aa	Known RBP	10.35	□□□□□ -0.75
CKLF-208	ENST00000563092	TRMT44	Q8IYL2	757 aa	Known RBP	10.35	□□□□□ -0.75
CKLF-208	ENST00000563092	SOCS4	Q8WXH5	440 aa		10.35	□□□□□ -0.75
CKLF-208	ENST00000563092	COPRS	Q9NQ92	184 aa		10.35	□□□□□ -0.75
CKLF-208	ENST00000563092	FAM196B	A6NMK8	535 aa		10.34	□□□□□ -0.75
CKLF-208	ENST00000563092	IGHA2	P01877	340 aa		10.34	□□□□□ -0.75
CKLF-208	ENST00000563092	BACE1	P56817	501 aa		10.34	□□□□□ -0.75
CKLF-208	ENST00000563092	PICALM	Q13492	652 aa		10.34	□□□□□ -0.75
CKLF-208	ENST00000563092	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.34	□□□□□ -0.75
CKLF-208	ENST00000563092	DZIP1	Q86YF9	867 aa	Known RBP	10.34	□□□□□ -0.75
CKLF-208	ENST00000563092	SSH1	Q8WYL5	1049 aa		10.34	□□□□□ -0.75
CKLF-208	ENST00000563092	P2RX7	Q99572	595 aa	Known RBP	10.34	□□□□□ -0.75
CKLF-208	ENST00000563092	NUDT12	Q9BQG2	462 aa		10.34	□□□□□ -0.75
CKLF-208	ENST00000563092	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
CKLF-208	ENST00000563092	RBPJL	Q9UBG7	517 aa		10.34	□□□□□ -0.75
CKLF-208	ENST00000563092	HERC5	Q9UII4	1024 aa	Known RBP	10.34	□□□□□ -0.75
CKLF-208	ENST00000563092	CYP2B6	P20813	491 aa		10.33	□□□□□ -0.76
CKLF-208	ENST00000563092	CCND3	P30281	292 aa	Predicted RBP	10.33	□□□□□ -0.76
CKLF-208	ENST00000563092	MAPK4	P31152	587 aa		10.33	□□□□□ -0.76
CKLF-208	ENST00000563092	JAG1	P78504	1218 aa		10.33	□□□□□ -0.76
CKLF-208	ENST00000563092	GPRC5A	Q8NFJ5	357 aa		10.33	□□□□□ -0.76
CKLF-208	ENST00000563092	NSUN4	Q96CB9	384 aa	Known RBP	10.33	□□□□□ -0.76
CKLF-208	ENST00000563092	SIL1	Q9H173	461 aa		10.33	□□□□□ -0.76
CKLF-208	ENST00000563092	MRS2	Q9HD23	443 aa		10.33	□□□□□ -0.76
CKLF-208	ENST00000563092	MAST2	Q6P0Q8	1798 aa		10.33	□□□□□ -0.76
CKLF-208	ENST00000563092	SIPA1L1	O43166	1804 aa		10.33	□□□□□ -0.76
CKLF-208	ENST00000563092	PEX10	O60683	326 aa		10.32	□□□□□ -0.76
CKLF-208	ENST00000563092	TIMM10	P62072	90 aa		10.32	□□□□□ -0.76
CKLF-208	ENST00000563092	HERVK_113	P62684	666 aa		10.32	□□□□□ -0.76
CKLF-208	ENST00000563092	MDM2	Q00987	491 aa	Predicted RBP	10.32	□□□□□ -0.76
CKLF-208	ENST00000563092	CCL14	Q16627	93 aa		10.32	□□□□□ -0.76
CKLF-208	ENST00000563092		Q3C1V9	767 aa		10.32	□□□□□ -0.76
CKLF-208	ENST00000563092	SPOCK2	Q92563	424 aa		10.32	□□□□□ -0.76
CKLF-208	ENST00000563092	PORCN	Q9H237	461 aa		10.32	□□□□□ -0.76
CKLF-208	ENST00000563092	DNAJC18	Q9H819	358 aa		10.32	□□□□□ -0.76
CKLF-208	ENST00000563092	AS3MT	Q9HBK9	375 aa		10.32	□□□□□ -0.76
CKLF-208	ENST00000563092	ABCF2	Q9UG63	623 aa		10.32	□□□□□ -0.76
CKLF-208	ENST00000563092	PA2G4	Q9UQ80	394 aa	Known RBP	10.32	□□□□□ -0.76
CKLF-208	ENST00000563092	ATAD5	Q96QE3	1844 aa		10.32	□□□□□ -0.76
CKLF-208	ENST00000563092	C19orf81	C9J6K1	198 aa		10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	ZKSCAN1	P17029	563 aa	Predicted RBP	10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	RGS2	P41220	211 aa		10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	ERVK-9	P63128	1117 aa		10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	ERVK-24	P63145	666 aa		10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	MTMR2	Q13614	643 aa		10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	ERICH6	Q7L0X2	663 aa		10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	GPR142	Q7Z601	462 aa		10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	XAGE2	Q96GT9	111 aa		10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	APBA2	Q99767	749 aa		10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	GINM1	Q9NU53	330 aa		10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	HMG20B	Q9P0W2	317 aa		10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	PI4KB	Q9UBF8	816 aa		10.31	□□□□□ -0.76
CKLF-208	ENST00000563092	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.31	□□□□□ -0.76
CKLF-208	ENST00000563092		A0A1B0GUL7	405 aa		10.3	□□□□□ -0.76
CKLF-208	ENST00000563092	LDHC	P07864	332 aa		10.3	□□□□□ -0.76
CKLF-208	ENST00000563092	ASNS	P08243	561 aa		10.3	□□□□□ -0.76
CKLF-208	ENST00000563092	HOXC6	P09630	235 aa		10.3	□□□□□ -0.76
CKLF-208	ENST00000563092	UBTFL1	P0CB47	393 aa	Predicted RBP	10.3	□□□□□ -0.76
CKLF-208	ENST00000563092	IRX3	P78415	501 aa	Predicted RBP	10.3	□□□□□ -0.76
CKLF-208	ENST00000563092	GSTO1	P78417	241 aa		10.3	□□□□□ -0.76
CKLF-208	ENST00000563092	MTX1	Q13505	466 aa		10.3	□□□□□ -0.76

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