RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 AATFQ9NY61 560 aaKnown RBP eCLIP19.32■□□□□ 0.68
HERPUD1-205ENST00000562914 FLT1P17948 1338 aa19.31■□□□□ 0.68
HERPUD1-205ENST00000562914 HLA-DOAP06340 250 aa19.31■□□□□ 0.68
HERPUD1-205ENST00000562914 TTC39AQ5SRH9 613 aa19.31■□□□□ 0.68
HERPUD1-205ENST00000562914 C7orf61Q8IZ16 206 aa19.31■□□□□ 0.68
HERPUD1-205ENST00000562914 SLC17A8Q8NDX2 589 aa19.31■□□□□ 0.68
HERPUD1-205ENST00000562914 P2RX7Q99572 595 aaKnown RBP19.31■□□□□ 0.68
HERPUD1-205ENST00000562914 PNMA6EA0A0J9YXQ4 647 aa19.3■□□□□ 0.68
HERPUD1-205ENST00000562914 SOX1O00570 391 aaPredicted RBP19.3■□□□□ 0.68
HERPUD1-205ENST00000562914 PRKAR2AP13861 404 aaKnown RBP19.3■□□□□ 0.68
HERPUD1-205ENST00000562914 TRIM27P14373 513 aa19.3■□□□□ 0.68
HERPUD1-205ENST00000562914 LRIT3Q3SXY7 679 aa19.3■□□□□ 0.68
HERPUD1-205ENST00000562914 CCAR1Q8IX12 1150 aaKnown RBP19.3■□□□□ 0.68
HERPUD1-205ENST00000562914 TGFBRAP1Q8WUH2 860 aa19.3■□□□□ 0.68
HERPUD1-205ENST00000562914 ALPK3Q96L96 1907 aa19.29■□□□□ 0.68
HERPUD1-205ENST00000562914 ZKSCAN1P17029 563 aaPredicted RBP19.29■□□□□ 0.68
HERPUD1-205ENST00000562914 CYP2B6P20813 491 aa19.29■□□□□ 0.68
HERPUD1-205ENST00000562914 RGS2P41220 211 aa19.29■□□□□ 0.68
HERPUD1-205ENST00000562914 MNX1P50219 401 aaPredicted RBP19.29■□□□□ 0.68
HERPUD1-205ENST00000562914 TNNI3KQ59H18 835 aa19.29■□□□□ 0.68
HERPUD1-205ENST00000562914 TMED8Q6PL24 325 aaPredicted RBP19.29■□□□□ 0.68
HERPUD1-205ENST00000562914 DNAJC18Q9H819 358 aa19.29■□□□□ 0.68
HERPUD1-205ENST00000562914 ZBTB21Q9ULJ3 1066 aa19.29■□□□□ 0.68
HERPUD1-205ENST00000562914 FPGT-TNNI3KV9GXZ4 949 aa19.29■□□□□ 0.68
HERPUD1-205ENST00000562914 ERVK-9P63128 1117 aa19.28■□□□□ 0.68
HERPUD1-205ENST00000562914 ERVK-24P63145 666 aa19.28■□□□□ 0.68
HERPUD1-205ENST00000562914 TRIM32Q13049 653 aa19.28■□□□□ 0.68
HERPUD1-205ENST00000562914 USP17L2Q6R6M4 530 aa19.28■□□□□ 0.68
HERPUD1-205ENST00000562914 MAPKAPK5Q8IW41 473 aa19.28■□□□□ 0.68
HERPUD1-205ENST00000562914 LRCH3Q96II8 777 aa19.28■□□□□ 0.68
HERPUD1-205ENST00000562914 RBPJLQ9UBG7 517 aa19.28■□□□□ 0.68
HERPUD1-205ENST00000562914 DDX60LQ5H9U9 1706 aaKnown RBP19.28■□□□□ 0.68
HERPUD1-205ENST00000562914 PLXNB2O15031 1838 aa19.28■□□□□ 0.68
HERPUD1-205ENST00000562914 SIPA1L1O43166 1804 aa19.28■□□□□ 0.68
HERPUD1-205ENST00000562914 GLRX3O76003 335 aaKnown RBP19.27■□□□□ 0.68
HERPUD1-205ENST00000562914 CYP2E1P05181 493 aaPredicted RBP19.27■□□□□ 0.68
HERPUD1-205ENST00000562914 POLA2Q14181 598 aa19.27■□□□□ 0.68
HERPUD1-205ENST00000562914 TDHQ8IZJ6 230 aa19.27■□□□□ 0.68
HERPUD1-205ENST00000562914 USP6NLQ92738 828 aa19.27■□□□□ 0.68
HERPUD1-205ENST00000562914 APBA2Q99767 749 aa19.27■□□□□ 0.68
HERPUD1-205ENST00000562914 TXNRD2Q9NNW7 524 aa19.27■□□□□ 0.68
HERPUD1-205ENST00000562914 PALD1Q9ULE6 856 aa19.27■□□□□ 0.68
HERPUD1-205ENST00000562914 ZMYND8Q9ULU4 1186 aaPredicted RBP19.27■□□□□ 0.68
HERPUD1-205ENST00000562914 LAMA3Q16787 3333 aa19.27■□□□□ 0.68
HERPUD1-205ENST00000562914 FOCADQ5VW36 1801 aa19.26■□□□□ 0.67
HERPUD1-205ENST00000562914 CCNA1P78396 465 aa19.26■□□□□ 0.67
HERPUD1-205ENST00000562914 OS9Q13438 667 aaPredicted RBP19.26■□□□□ 0.67
HERPUD1-205ENST00000562914 MORN1Q5T089 497 aa19.26■□□□□ 0.67
HERPUD1-205ENST00000562914 GPR142Q7Z601 462 aa19.26■□□□□ 0.67
HERPUD1-205ENST00000562914 PLEKHH3Q7Z736 793 aa19.26■□□□□ 0.67
HERPUD1-205ENST00000562914 C12orf42Q96LP6 360 aa19.26■□□□□ 0.67
HERPUD1-205ENST00000562914 SNRKQ9NRH2 765 aa19.26■□□□□ 0.67
HERPUD1-205ENST00000562914 RABGAP1Q9Y3P9 1069 aa19.26■□□□□ 0.67
HERPUD1-205ENST00000562914 DLL1O00548 723 aa19.25■□□□□ 0.67
HERPUD1-205ENST00000562914 GDF11O95390 407 aa19.25■□□□□ 0.67
HERPUD1-205ENST00000562914 COL6A1P12109 1028 aa19.25■□□□□ 0.67
HERPUD1-205ENST00000562914 MAGEA10P43363 369 aaPredicted RBP19.25■□□□□ 0.67
HERPUD1-205ENST00000562914 USP14P54578 494 aa19.25■□□□□ 0.67
HERPUD1-205ENST00000562914 JAG1P78504 1218 aa19.25■□□□□ 0.67
HERPUD1-205ENST00000562914 CACNB2Q08289 660 aaPredicted RBP19.25■□□□□ 0.67
HERPUD1-205ENST00000562914 ADGRA1Q86SQ6 560 aa19.25■□□□□ 0.67
HERPUD1-205ENST00000562914 SSH3Q8TE77 659 aa19.25■□□□□ 0.67
HERPUD1-205ENST00000562914 FRAT1Q92837 279 aaPredicted RBP19.25■□□□□ 0.67
HERPUD1-205ENST00000562914 DBNDD2Q9BQY9 259 aa19.25■□□□□ 0.67
HERPUD1-205ENST00000562914 EHD4Q9H223 541 aa19.25■□□□□ 0.67
HERPUD1-205ENST00000562914 CWC22Q9HCG8 908 aaKnown RBP19.25■□□□□ 0.67
HERPUD1-205ENST00000562914 CCER2I3L3R5 266 aa19.24■□□□□ 0.67
HERPUD1-205ENST00000562914 EMILIN3Q9NT22 766 aa19.24■□□□□ 0.67
HERPUD1-205ENST00000562914 PFASO15067 1338 aa19.24■□□□□ 0.67
HERPUD1-205ENST00000562914 USP17L15C9J2P7 530 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 USP17L13C9JLJ4 530 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 USP17L11C9JVI0 530 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 USP17L18D6R9N7 530 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 USP17L22D6RA61 530 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 USP17L17D6RBQ6 530 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 USP17L19D6RCP7 530 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 USP17L20D6RJB6 530 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 MSCO60682 206 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 SYN1P17600 705 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 ATP8B2P98198 1209 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 USP17L24Q0WX57 530 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 Q3C1V9 767 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 LHX8Q68G74 356 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 TATDN1Q6P1N9 297 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 DEFB123Q8N688 67 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 PAGR1Q9BTK6 254 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 UBE2OQ9C0C9 1292 aaKnown RBP19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 PORCNQ9H237 461 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 SERPINB13Q9UIV8 391 aa19.23■□□□□ 0.67
HERPUD1-205ENST00000562914 CDK5RAP2Q96SN8 1893 aa19.22■□□□□ 0.67
HERPUD1-205ENST00000562914 SURF6O75683 361 aaKnown RBP19.22■□□□□ 0.67
HERPUD1-205ENST00000562914 GH2P01242 217 aa19.22■□□□□ 0.67
HERPUD1-205ENST00000562914 CYP7A1P22680 504 aa19.22■□□□□ 0.67
HERPUD1-205ENST00000562914 ZAP70P43403 619 aa19.22■□□□□ 0.67
HERPUD1-205ENST00000562914 MAP2K5Q13163 448 aa19.22■□□□□ 0.67
HERPUD1-205ENST00000562914 ZKSCAN2Q63HK3 967 aa19.22■□□□□ 0.67
HERPUD1-205ENST00000562914 LBX2Q6XYB7 198 aa19.22■□□□□ 0.67
HERPUD1-205ENST00000562914 TTC6Q86TZ1 520 aa19.22■□□□□ 0.67
HERPUD1-205ENST00000562914 CLUAP1Q96AJ1 413 aa19.22■□□□□ 0.67
HERPUD1-205ENST00000562914 EDC3Q96F86 508 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms