RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 PCMTD2Q9NV79 361 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 KIAA1257Q9ULG3 409 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 CORO1CQ9ULV4 474 aaPredicted RBP10.54□□□□□ -0.72
CDH1-205ENST00000562836 R3HDM2Q9Y2K5 976 aaKnown RBP10.54□□□□□ -0.72
CDH1-205ENST00000562836 EHBP1L1Q8N3D4 1523 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 hCG_2014768A0A024R1R8 64 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 A0A1W2PQ67 120 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 LINGO3P0C6S8 592 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 RPL17P18621 184 aaKnown RBP10.54□□□□□ -0.72
CDH1-205ENST00000562836 PTGS1P23219 599 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 BPIFB4P59827 614 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 CCDC57Q2TAC2 916 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 LRRN4CLQ8ND94 238 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 WDR66Q8TBY9 1149 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 TANGO6Q9C0B7 1094 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 VCPKMTQ9H867 229 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 LUC7LQ9NQ29 371 aaKnown RBP10.54□□□□□ -0.72
CDH1-205ENST00000562836 CEP131Q9UPN4 1083 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 TMED5Q9Y3A6 229 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.54□□□□□ -0.72
CDH1-205ENST00000562836 ABCA5Q8WWZ7 1642 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 FANCD2Q9BXW9 1451 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 RAPGEF3O95398 923 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 LDHBP07195 334 aaKnown RBP10.53□□□□□ -0.72
CDH1-205ENST00000562836 PDHBP11177 359 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 POLD2P49005 469 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 FNTAP49354 379 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 NUGGCQ68CJ6 796 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 ZNF449Q6P9G9 518 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 C11orf74Q86VG3 221 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 OCEL1Q9H607 264 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 DKK3Q9UBP4 350 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 TRPC6Q9Y210 931 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 DENND4BO75064 1496 aaPredicted RBP10.53□□□□□ -0.72
CDH1-205ENST00000562836 POLR1AO95602 1720 aaPredicted RBP10.53□□□□□ -0.72
CDH1-205ENST00000562836 MLH1P40692 756 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 PMS2P54278 862 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 IGBP1P78318 339 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 BEND6Q5SZJ8 279 aaPredicted RBP10.53□□□□□ -0.72
CDH1-205ENST00000562836 KRT77Q7Z794 578 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 BRSK2Q8IWQ3 736 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 CCDC170Q8IYT3 715 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 TTC39CQ8N584 583 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 JAKMIP1Q96N16 626 aaKnown RBP10.53□□□□□ -0.72
CDH1-205ENST00000562836 CLSTN2Q9H4D0 955 aa10.53□□□□□ -0.72
CDH1-205ENST00000562836 CDK17Q00537 523 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 PLOD1Q02809 727 aaPredicted RBP10.52□□□□□ -0.73
CDH1-205ENST00000562836 CYP4A11Q02928 519 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 PPIDQ08752 370 aaKnown RBP10.52□□□□□ -0.73
CDH1-205ENST00000562836 DYDC1Q8WWB3 177 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 CDK5RAP3Q96JB5 506 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 VPS50Q96JG6 964 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 TMEM87BQ96K49 555 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 HAUS7Q99871 368 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 OSBPL5Q9H0X9 879 aaPredicted RBP10.52□□□□□ -0.73
CDH1-205ENST00000562836 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.52□□□□□ -0.73
CDH1-205ENST00000562836 DAAM1Q9Y4D1 1078 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 ARHGEF11O15085 1522 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 IQCA1LA6NCM1 817 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 PDE6CP51160 858 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 HSD17B7P56937 341 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 LRMPQ12912 555 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 ZNF362Q5T0B9 420 aaPredicted RBP10.52□□□□□ -0.73
CDH1-205ENST00000562836 FAM173BQ6P4H8 233 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 CCDC174Q6PII3 467 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 HS6ST3Q8IZP7 471 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 ARHGAP18Q8N392 663 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 APPL2Q8NEU8 664 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 DEPTORQ8TB45 409 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 SGCDQ92629 289 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 ZNF75CPQ92670 426 aaPredicted RBP10.52□□□□□ -0.73
CDH1-205ENST00000562836 XAGE2Q96GT9 111 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 NAP1L3Q99457 506 aaPredicted RBP10.52□□□□□ -0.73
CDH1-205ENST00000562836 NDFIP2Q9NV92 336 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 KCTD5Q9NXV2 234 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 TTLL3Q9Y4R7 772 aa10.52□□□□□ -0.73
CDH1-205ENST00000562836 TCOF1Q13428 1488 aaKnown RBP10.52□□□□□ -0.73
CDH1-205ENST00000562836 SAMD9Q5K651 1589 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 GOLGA6L4A6NEF3 574 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 CCT5P48643 541 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 GNAQP50148 359 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 TUBA1BP68363 451 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 MUM1Q2TAK8 710 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 TCERG1LQ5VWI1 586 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 TUBA1AQ71U36 451 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 SNX27Q96L92 541 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 SPAG5Q96R06 1193 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 GTF3C4Q9UKN8 822 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 UGGT2Q9NYU1 1516 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 MAPK8IP3Q9UPT6 1336 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 GRIN2BQ13224 1484 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 PALM3A6NDB9 673 aaPredicted RBP10.51□□□□□ -0.73
CDH1-205ENST00000562836 C19orf81C9J6K1 198 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 EBAG9O00559 213 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 PFDN1O60925 122 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 KATNA1O75449 491 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 GLULP15104 373 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 IQCEQ6IPM2 695 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 IRGCQ6NXR0 463 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 SLC2A7Q6PXP3 512 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms