RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 TGFB1P01137 390 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 DTX1Q86Y01 620 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 SLITRK4Q8IW52 837 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 SLFN12Q8IYM2 578 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 TOP6BLQ8N6T0 577 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 TMEM87BQ96K49 555 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 TGIF2Q9GZN2 237 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 EHMT1Q9H9B1 1298 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 ZFP64Q9NPA5 681 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 PRDM5Q9NQX1 630 aaPredicted RBP4.87□□□□□ -1.63
CHD9-207ENST00000562806 PCMTD2Q9NV79 361 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 BSDC1Q9NW68 430 aaPredicted RBP4.87□□□□□ -1.63
CHD9-207ENST00000562806 TJP2Q9UDY2 1190 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 ADAMTS1Q9UHI8 967 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.87□□□□□ -1.63
CHD9-207ENST00000562806 SNX11Q9Y5W9 270 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 GNAT3A8MTJ3 354 aa4.86□□□□□ -1.63
CHD9-207ENST00000562806 HTR3BO95264 441 aa4.86□□□□□ -1.63
CHD9-207ENST00000562806 TCF3P15923 654 aa4.86□□□□□ -1.63
CHD9-207ENST00000562806 KIR3DL1P43629 444 aa4.86□□□□□ -1.63
CHD9-207ENST00000562806 RBM25P49756 843 aaKnown RBP4.86□□□□□ -1.63
CHD9-207ENST00000562806 CHMP4BP1P59074 171 aa4.86□□□□□ -1.63
CHD9-207ENST00000562806 PRAMEF13Q5VWM6 474 aa4.86□□□□□ -1.63
CHD9-207ENST00000562806 LETMD1Q6P1Q0 360 aa4.86□□□□□ -1.63
CHD9-207ENST00000562806 C22orf34Q6ZV56 151 aa4.86□□□□□ -1.63
CHD9-207ENST00000562806 METTL16Q86W50 562 aaKnown RBP4.86□□□□□ -1.63
CHD9-207ENST00000562806 NT5DC4Q86YG4 428 aa4.86□□□□□ -1.63
CHD9-207ENST00000562806 FAM13CQ8NE31 585 aa4.86□□□□□ -1.63
CHD9-207ENST00000562806 NETO1Q8TDF5 533 aa4.86□□□□□ -1.63
CHD9-207ENST00000562806 FBRSQ9HAH7 460 aa4.86□□□□□ -1.63
CHD9-207ENST00000562806 TPX2Q9ULW0 747 aaKnown RBP4.86□□□□□ -1.63
CHD9-207ENST00000562806 TMEM265A0A087WTH1 108 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 PRNPP04156 253 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 CCNFP41002 786 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 CDK8P49336 464 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 HDLBPQ00341 1268 aaKnown RBP4.85□□□□□ -1.63
CHD9-207ENST00000562806 RAD51AP2Q09MP3 1159 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 GNL2Q13823 731 aaKnown RBP4.85□□□□□ -1.63
CHD9-207ENST00000562806 IFI16Q16666 785 aaKnown RBP4.85□□□□□ -1.63
CHD9-207ENST00000562806 SEZ6Q53EL9 994 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 SFRP5Q5T4F7 317 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 NBPF11Q86T75 865 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 VSIG10LQ86VR7 867 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 CYB5D2Q8WUJ1 264 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 ACSF2Q96CM8 615 aaPredicted RBP4.85□□□□□ -1.63
CHD9-207ENST00000562806 CCDC74BQ96LY2 380 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 FBXL18Q96ME1 805 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 MIPEPQ99797 713 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 CCSER2Q9H7U1 834 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 LRRC4CQ9HCJ2 640 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 BRMS1Q9HCU9 246 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 GMIPQ9P107 970 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 REV1Q9UBZ9 1251 aa4.85□□□□□ -1.63
CHD9-207ENST00000562806 ANGEL1Q9UNK9 670 aaKnown RBP4.85□□□□□ -1.63
CHD9-207ENST00000562806 TLR3O15455 904 aaKnown RBP4.84□□□□□ -1.63
CHD9-207ENST00000562806 HYAL3O43820 417 aaPredicted RBP4.84□□□□□ -1.63
CHD9-207ENST00000562806 SLITRK5O94991 958 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 WNT11O96014 354 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 CEACAM5P06731 702 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 SPINK2P20155 84 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 SSTR4P31391 388 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 MCM4P33991 863 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 CLCN7P51798 805 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 NKG7Q16617 165 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 MSMPQ1L6U9 139 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 ZNF394Q53GI3 561 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 VPS37DQ86XT2 251 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 RASGRP4Q8TDF6 673 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 EAF1Q96JC9 268 aaPredicted RBP4.84□□□□□ -1.63
CHD9-207ENST00000562806 UBP1Q9NZI7 540 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 VAV3Q9UKW4 847 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 CEP131Q9UPN4 1083 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 POLR3KQ9Y2Y1 108 aaPredicted RBP4.84□□□□□ -1.63
CHD9-207ENST00000562806 PCDHB14Q9Y5E9 798 aa4.84□□□□□ -1.63
CHD9-207ENST00000562806 LEFTY1O75610 366 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 EOMESO95936 686 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 ZNF865P0CJ78 1059 aaPredicted RBP4.83□□□□□ -1.64
CHD9-207ENST00000562806 OXCT1P55809 520 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 RACK1P63244 317 aaKnown RBP4.83□□□□□ -1.64
CHD9-207ENST00000562806 PRKCQQ04759 706 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 CDCP2Q5VXM1 449 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 FAM214BQ7L5A3 538 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 PHACTR4Q8IZ21 702 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 AGBL5Q8NDL9 886 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 FBXO27Q8NI29 283 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 PIWIL2Q8TC59 973 aaKnown RBP4.83□□□□□ -1.64
CHD9-207ENST00000562806 GPRASP2Q96D09 838 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 SEC16BQ96JE7 1060 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.83□□□□□ -1.64
CHD9-207ENST00000562806 KCNH3Q9ULD8 1083 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 STRIP2Q9ULQ0 834 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 SLC5A6Q9Y289 635 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 PCDHGB7Q9Y5F8 929 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 CORINQ9Y5Q5 1042 aa4.83□□□□□ -1.64
CHD9-207ENST00000562806 SLC22A31A6NKX4 558 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 MEIS3P2A8K0S8 358 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 FAM155AB1AL88 458 aaPredicted RBP4.82□□□□□ -1.64
CHD9-207ENST00000562806 GRIN3BO60391 1043 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 RAG1P15918 1043 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 ERCC5P28715 1186 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms