RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 CAP2P40123 477 aa8.49□□□□□ -1.05
CHD9-205ENST00000562785 CDCP2Q5VXM1 449 aa8.49□□□□□ -1.05
CHD9-205ENST00000562785 HID1Q8IV36 788 aa8.49□□□□□ -1.05
CHD9-205ENST00000562785 MCATQ8IVS2 390 aaKnown RBP8.49□□□□□ -1.05
CHD9-205ENST00000562785 PMFBP1Q8TBY8 1022 aa8.49□□□□□ -1.05
CHD9-205ENST00000562785 HNRNPLLQ8WVV9 542 aaKnown RBP8.49□□□□□ -1.05
CHD9-205ENST00000562785 UBL7Q96S82 380 aaPredicted RBP8.49□□□□□ -1.05
CHD9-205ENST00000562785 FBRSQ9HAH7 460 aa8.49□□□□□ -1.05
CHD9-205ENST00000562785 SART1O43290 800 aaKnown RBP8.48□□□□□ -1.05
CHD9-205ENST00000562785 GAS2O43903 313 aaKnown RBP8.48□□□□□ -1.05
CHD9-205ENST00000562785 CASP7P55210 303 aa8.48□□□□□ -1.05
CHD9-205ENST00000562785 SERINC3Q13530 473 aa8.48□□□□□ -1.05
CHD9-205ENST00000562785 NLRC3Q7RTR2 1065 aa8.48□□□□□ -1.05
CHD9-205ENST00000562785 UBE3DQ7Z6J8 389 aa8.48□□□□□ -1.05
CHD9-205ENST00000562785 TXNRD3Q86VQ6 643 aa8.48□□□□□ -1.05
CHD9-205ENST00000562785 SLFN12Q8IYM2 578 aa8.48□□□□□ -1.05
CHD9-205ENST00000562785 SMYD4Q8IYR2 804 aaPredicted RBP8.48□□□□□ -1.05
CHD9-205ENST00000562785 DZIP1LQ8IYY4 767 aaKnown RBP8.48□□□□□ -1.05
CHD9-205ENST00000562785 ATG4CQ96DT6 458 aa8.48□□□□□ -1.05
CHD9-205ENST00000562785 TMEM87BQ96K49 555 aa8.48□□□□□ -1.05
CHD9-205ENST00000562785 ACSS3Q9H6R3 686 aa8.48□□□□□ -1.05
CHD9-205ENST00000562785 CNNM2Q9H8M5 875 aa8.48□□□□□ -1.05
CHD9-205ENST00000562785 KLHL3Q9UH77 587 aa8.48□□□□□ -1.05
CHD9-205ENST00000562785 TNFRSF10CO14798 259 aa8.47□□□□□ -1.05
CHD9-205ENST00000562785 NME1P15531 152 aaKnown RBP8.47□□□□□ -1.05
CHD9-205ENST00000562785 GUCY2CP25092 1073 aa8.47□□□□□ -1.05
CHD9-205ENST00000562785 YARSP54577 528 aaKnown RBP8.47□□□□□ -1.05
CHD9-205ENST00000562785 RAB33AQ14088 237 aa8.47□□□□□ -1.05
CHD9-205ENST00000562785 SLBPQ14493 270 aaKnown RBP eCLIP8.47□□□□□ -1.05
CHD9-205ENST00000562785 NKG7Q16617 165 aa8.47□□□□□ -1.05
CHD9-205ENST00000562785 SLC6A19Q695T7 634 aa8.47□□□□□ -1.05
CHD9-205ENST00000562785 RUFY4Q6ZNE9 571 aa8.47□□□□□ -1.05
CHD9-205ENST00000562785 CDC37L1Q7L3B6 337 aa8.47□□□□□ -1.05
CHD9-205ENST00000562785 MEGF10Q96KG7 1140 aa8.47□□□□□ -1.05
CHD9-205ENST00000562785 ACTR10Q9NZ32 417 aa8.47□□□□□ -1.05
CHD9-205ENST00000562785 CHURC1-FNTBB4DL54 471 aa8.46□□□□□ -1.06
CHD9-205ENST00000562785 RNGTTO60942 597 aaKnown RBP8.46□□□□□ -1.06
CHD9-205ENST00000562785 ARSHQ5FYA8 562 aa8.46□□□□□ -1.06
CHD9-205ENST00000562785 INTS3Q68E01 1043 aaKnown RBP8.46□□□□□ -1.06
CHD9-205ENST00000562785 FAM13CQ8NE31 585 aa8.46□□□□□ -1.06
CHD9-205ENST00000562785 EZH1Q92800 747 aaPredicted RBP8.46□□□□□ -1.06
CHD9-205ENST00000562785 TRIM55Q9BYV6 548 aa8.46□□□□□ -1.06
CHD9-205ENST00000562785 OSBPL2Q9H1P3 480 aa8.46□□□□□ -1.06
CHD9-205ENST00000562785 KRBA1A5PL33 1030 aa8.45□□□□□ -1.06
CHD9-205ENST00000562785 UPK3BL1B0FP48 263 aa8.45□□□□□ -1.06
CHD9-205ENST00000562785 UPK3BL2E5RIL1 263 aa8.45□□□□□ -1.06
CHD9-205ENST00000562785 ACRP10323 421 aa8.45□□□□□ -1.06
CHD9-205ENST00000562785 RAB6AP20340 208 aa8.45□□□□□ -1.06
CHD9-205ENST00000562785 USP11P51784 963 aa8.45□□□□□ -1.06
CHD9-205ENST00000562785 CCDC144BQ3MJ40 725 aa8.45□□□□□ -1.06
CHD9-205ENST00000562785 CDPF1Q6NVV7 123 aa8.45□□□□□ -1.06
CHD9-205ENST00000562785 MYRFLQ96LU7 910 aa8.45□□□□□ -1.06
CHD9-205ENST00000562785 YIPF2Q9BWQ6 316 aa8.45□□□□□ -1.06
CHD9-205ENST00000562785 STK17AQ9UEE5 414 aa8.45□□□□□ -1.06
CHD9-205ENST00000562785 PCOLCE2Q9UKZ9 415 aa8.45□□□□□ -1.06
CHD9-205ENST00000562785 R3HCC1Q9Y3T6 440 aaKnown RBP8.45□□□□□ -1.06
CHD9-205ENST00000562785 A0A1W2PQH9 124 aa8.44□□□□□ -1.06
CHD9-205ENST00000562785 CST3P01034 146 aaPredicted RBP8.44□□□□□ -1.06
CHD9-205ENST00000562785 CHRNA4P43681 627 aa8.44□□□□□ -1.06
CHD9-205ENST00000562785 SGO2Q562F6 1265 aa8.44□□□□□ -1.06
CHD9-205ENST00000562785 TTC6Q86TZ1 520 aa8.44□□□□□ -1.06
CHD9-205ENST00000562785 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.44□□□□□ -1.06
CHD9-205ENST00000562785 ARMC10Q8N2F6 343 aa8.44□□□□□ -1.06
CHD9-205ENST00000562785 UTP4Q969X6 686 aaKnown RBP8.44□□□□□ -1.06
CHD9-205ENST00000562785 DCAF5Q96JK2 942 aa8.44□□□□□ -1.06
CHD9-205ENST00000562785 SSBP4Q9BWG4 385 aaPredicted RBP8.44□□□□□ -1.06
CHD9-205ENST00000562785 TNKS2Q9H2K2 1166 aa8.44□□□□□ -1.06
CHD9-205ENST00000562785 SEMA6CQ9H3T2 930 aa8.44□□□□□ -1.06
CHD9-205ENST00000562785 SIRPGQ9P1W8 387 aa8.44□□□□□ -1.06
CHD9-205ENST00000562785 CCDC88BA6NC98 1476 aa8.44□□□□□ -1.06
CHD9-205ENST00000562785 LOC105371045A0A1W2PR82 267 aa8.43□□□□□ -1.06
CHD9-205ENST00000562785 RAG1P15918 1043 aa8.43□□□□□ -1.06
CHD9-205ENST00000562785 CCNFP41002 786 aa8.43□□□□□ -1.06
CHD9-205ENST00000562785 PRAMEF13Q5VWM6 474 aa8.43□□□□□ -1.06
CHD9-205ENST00000562785 CD163Q86VB7 1156 aa8.43□□□□□ -1.06
CHD9-205ENST00000562785 SLC9A7Q96T83 725 aa8.43□□□□□ -1.06
CHD9-205ENST00000562785 DPH2Q9BQC3 489 aaPredicted RBP8.43□□□□□ -1.06
CHD9-205ENST00000562785 FOXQ1Q9C009 403 aa8.43□□□□□ -1.06
CHD9-205ENST00000562785 SSU72Q9NP77 194 aaKnown RBP8.43□□□□□ -1.06
CHD9-205ENST00000562785 SLC12A7Q9Y666 1083 aa8.43□□□□□ -1.06
CHD9-205ENST00000562785 U2SURPO15042 1029 aaKnown RBP8.42□□□□□ -1.06
CHD9-205ENST00000562785 LRIG2O94898 1065 aa8.42□□□□□ -1.06
CHD9-205ENST00000562785 BMP3P12645 472 aa8.42□□□□□ -1.06
CHD9-205ENST00000562785 PPP2R5EQ16537 467 aa8.42□□□□□ -1.06
CHD9-205ENST00000562785 UNC5AQ6ZN44 842 aa8.42□□□□□ -1.06
CHD9-205ENST00000562785 ARMCX6Q7L4S7 300 aa8.42□□□□□ -1.06
CHD9-205ENST00000562785 FAM20CQ8IXL6 584 aa8.42□□□□□ -1.06
CHD9-205ENST00000562785 CELF2-AS1Q8N7Q2 184 aa8.42□□□□□ -1.06
CHD9-205ENST00000562785 CYB5D2Q8WUJ1 264 aa8.42□□□□□ -1.06
CHD9-205ENST00000562785 FBLIM1Q8WUP2 373 aa8.42□□□□□ -1.06
CHD9-205ENST00000562785 MKL1Q969V6 931 aa8.42□□□□□ -1.06
CHD9-205ENST00000562785 DAGLAQ9Y4D2 1042 aa8.42□□□□□ -1.06
CHD9-205ENST00000562785 RGS13O14921 159 aa8.41□□□□□ -1.06
CHD9-205ENST00000562785 NFICP08651 508 aa8.41□□□□□ -1.06
CHD9-205ENST00000562785 MAP4P27816 1152 aaKnown RBP8.41□□□□□ -1.06
CHD9-205ENST00000562785 MAP7Q14244 749 aa8.41□□□□□ -1.06
CHD9-205ENST00000562785 ZYXQ15942 572 aaKnown RBP8.41□□□□□ -1.06
CHD9-205ENST00000562785 DDR2Q16832 855 aa8.41□□□□□ -1.06
CHD9-205ENST00000562785 PHACTR4Q8IZ21 702 aa8.41□□□□□ -1.06
CHD9-205ENST00000562785 MFSD2AQ8NA29 543 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms