RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 NDUFB9Q9Y6M9 179 aa11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 RFX7Q2KHR2 1363 aa11.28□□□□□ -0.6
CHRFAM7A-204ENST00000562729 TRIM75PA6NK02 468 aa11.28□□□□□ -0.6
CHRFAM7A-204ENST00000562729 FAM196BA6NMK8 535 aa11.28□□□□□ -0.6
CHRFAM7A-204ENST00000562729 BTBD19C9JJ37 291 aa11.28□□□□□ -0.6
CHRFAM7A-204ENST00000562729 PDHXO00330 501 aa11.28□□□□□ -0.6
CHRFAM7A-204ENST00000562729 GOLIM4O00461 696 aa11.28□□□□□ -0.6
CHRFAM7A-204ENST00000562729 SH3BP5LQ7L8J4 393 aa11.28□□□□□ -0.6
CHRFAM7A-204ENST00000562729 FASTKD5Q7L8L6 764 aaKnown RBP11.28□□□□□ -0.6
CHRFAM7A-204ENST00000562729 GPATCH3Q96I76 525 aa11.28□□□□□ -0.6
CHRFAM7A-204ENST00000562729 ZCCHC17Q9NP64 241 aaKnown RBP11.28□□□□□ -0.6
CHRFAM7A-204ENST00000562729 SAP30BPQ9UHR5 308 aaKnown RBP11.28□□□□□ -0.6
CHRFAM7A-204ENST00000562729 HERC5Q9UII4 1024 aaKnown RBP11.28□□□□□ -0.6
CHRFAM7A-204ENST00000562729 ATRNL1Q5VV63 1379 aa11.28□□□□□ -0.6
CHRFAM7A-204ENST00000562729 MAGEB6P1A0A0J9YX57 407 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 PHF20L1A8MW92 1017 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 CXCL11O14625 94 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 TBC1D12O60347 775 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 PTPRAP18433 802 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 SOX10P56693 466 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 PPP4CP60510 307 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 MLLT1Q03111 559 aaPredicted RBP11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 SLC4A8Q2Y0W8 1093 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 SLC9C2Q5TAH2 1124 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 TMED8Q6PL24 325 aaPredicted RBP11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 ANKRD23Q86SG2 305 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 SIRT2Q8IXJ6 389 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 PARK7Q99497 189 aaKnown RBP11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 AS3MTQ9HBK9 375 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 FLT1P17948 1338 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 DOCK1Q14185 1865 aa11.27□□□□□ -0.61
CHRFAM7A-204ENST00000562729 COL2A1P02458 1487 aaPredicted RBP11.26□□□□□ -0.61
CHRFAM7A-204ENST00000562729 MYO5AQ9Y4I1 1855 aaKnown RBP11.26□□□□□ -0.61
CHRFAM7A-204ENST00000562729 TLR2O60603 784 aa11.26□□□□□ -0.61
CHRFAM7A-204ENST00000562729 DYNLL1P63167 89 aaKnown RBP11.26□□□□□ -0.61
CHRFAM7A-204ENST00000562729 OTOP1Q7RTM1 612 aa11.26□□□□□ -0.61
CHRFAM7A-204ENST00000562729 ADGRA1Q86SQ6 560 aa11.26□□□□□ -0.61
CHRFAM7A-204ENST00000562729 SMCR8Q8TEV9 937 aaPredicted RBP11.26□□□□□ -0.61
CHRFAM7A-204ENST00000562729 BOLA2Q9H3K6 86 aa11.26□□□□□ -0.61
CHRFAM7A-204ENST00000562729 ANTXR1Q9H6X2 564 aa11.26□□□□□ -0.61
CHRFAM7A-204ENST00000562729 PALD1Q9ULE6 856 aa11.26□□□□□ -0.61
CHRFAM7A-204ENST00000562729 KCNH4Q9UQ05 1017 aa11.26□□□□□ -0.61
CHRFAM7A-204ENST00000562729 SLURP2P0DP57 97 aa11.25□□□□□ -0.61
CHRFAM7A-204ENST00000562729 RRP1P56182 461 aaKnown RBP11.25□□□□□ -0.61
CHRFAM7A-204ENST00000562729 FOXP4Q8IVH2 680 aaPredicted RBP11.25□□□□□ -0.61
CHRFAM7A-204ENST00000562729 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHRFAM7A-204ENST00000562729 KHSRPQ92945 711 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHRFAM7A-204ENST00000562729 DDRGK1Q96HY6 314 aa11.25□□□□□ -0.61
CHRFAM7A-204ENST00000562729 TBC1D2Q9BYX2 928 aa11.25□□□□□ -0.61
CHRFAM7A-204ENST00000562729 CRNKL1Q9BZJ0 848 aaKnown RBP11.25□□□□□ -0.61
CHRFAM7A-204ENST00000562729 PAG1Q9NWQ8 432 aa11.25□□□□□ -0.61
CHRFAM7A-204ENST00000562729 CPA4Q9UI42 421 aa11.25□□□□□ -0.61
CHRFAM7A-204ENST00000562729 A0A0G2JLL6 359 aaPredicted RBP11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 USP17L5A8MUK1 530 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 SMARCA5O60264 1052 aaPredicted RBP11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 FMNL1O95466 1100 aaPredicted RBP11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 POLR3DP05423 398 aaPredicted RBP11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 ASNSP08243 561 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 PDE6AP16499 860 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 CAP2P40123 477 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 MAP3K10Q02779 954 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 SPP2Q13103 211 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 PABPC4Q13310 644 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 ZSCAN25Q6NSZ9 544 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 PRRT2Q7Z6L0 340 aaPredicted RBP11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 NBPF11Q86T75 865 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 TTC6Q86TZ1 520 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 CCDC84Q86UT8 332 aaPredicted RBP11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 AMOTL1Q8IY63 956 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 ZNF280CQ8ND82 737 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 FBXO22Q8NEZ5 403 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 TMOD4Q9NZQ9 345 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 PNMA3Q9UL41 463 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 PTPN22Q9Y2R2 807 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 AFG3L2Q9Y4W6 797 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 ZNF532Q9HCE3 1301 aa11.24□□□□□ -0.61
CHRFAM7A-204ENST00000562729 ATAD5Q96QE3 1844 aa11.23□□□□□ -0.61
CHRFAM7A-204ENST00000562729 GNRH1P01148 92 aa11.23□□□□□ -0.61
CHRFAM7A-204ENST00000562729 CYP2C8P10632 490 aa11.23□□□□□ -0.61
CHRFAM7A-204ENST00000562729 ATP5JP18859 108 aa11.23□□□□□ -0.61
CHRFAM7A-204ENST00000562729 HOXD10P28358 340 aa11.23□□□□□ -0.61
CHRFAM7A-204ENST00000562729 LACTBP83111 547 aaPredicted RBP11.23□□□□□ -0.61
CHRFAM7A-204ENST00000562729 SLC9C1Q4G0N8 1177 aa11.23□□□□□ -0.61
CHRFAM7A-204ENST00000562729 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.23□□□□□ -0.61
CHRFAM7A-204ENST00000562729 FOCADQ5VW36 1801 aa11.23□□□□□ -0.61
CHRFAM7A-204ENST00000562729 GDF11O95390 407 aa11.22□□□□□ -0.61
CHRFAM7A-204ENST00000562729 MYH1P12882 1939 aa11.22□□□□□ -0.61
CHRFAM7A-204ENST00000562729 OSBPP22059 807 aa11.22□□□□□ -0.61
CHRFAM7A-204ENST00000562729 HMGCS2P54868 508 aa11.22□□□□□ -0.61
CHRFAM7A-204ENST00000562729 FCGRTP55899 365 aa11.22□□□□□ -0.61
CHRFAM7A-204ENST00000562729 CDK5RAP2Q96SN8 1893 aa11.22□□□□□ -0.61
CHRFAM7A-204ENST00000562729 FEZ1Q99689 392 aa11.22□□□□□ -0.61
CHRFAM7A-204ENST00000562729 HAUS7Q99871 368 aa11.22□□□□□ -0.61
CHRFAM7A-204ENST00000562729 CABP5Q9NP86 173 aa11.22□□□□□ -0.61
CHRFAM7A-204ENST00000562729 ECHDC1Q9NTX5 307 aa11.22□□□□□ -0.61
CHRFAM7A-204ENST00000562729 MCM9Q9NXL9 1143 aa11.22□□□□□ -0.61
CHRFAM7A-204ENST00000562729 SERPINB13Q9UIV8 391 aa11.22□□□□□ -0.61
CHRFAM7A-204ENST00000562729 AGTPBP1Q9UPW5 1226 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms