RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CAMK4Q16566 473 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 ZNF589Q86UQ0 364 aaPredicted RBP8.58□□□□□ -1.04
TCF4-216ENST00000562680 CCDC94Q9BW85 323 aaPredicted RBP8.58□□□□□ -1.04
TCF4-216ENST00000562680 CLEC11AQ9Y240 323 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 PNPLA7Q6ZV29 1317 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 GPATCH4Q5T3I0 446 aaKnown RBP8.58□□□□□ -1.04
TCF4-216ENST00000562680 ANO1Q5XXA6 986 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 KRT40Q6A162 431 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 DTHD1Q6ZMT9 781 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 IQUBQ8NA54 791 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 SDR42E1Q8WUS8 393 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 SUDS3Q9H7L9 328 aaPredicted RBP8.58□□□□□ -1.04
TCF4-216ENST00000562680 V9GY48 417 aaPredicted RBP8.58□□□□□ -1.04
TCF4-216ENST00000562680 M0R2C6 588 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 ZNF165P49910 485 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 FKBP15Q5T1M5 1219 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 RASEFQ8IZ41 740 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 ELP1O95163 1332 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 CUTAO60888 179 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 LIG1P18858 919 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 STAT6P42226 847 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 FOXP4Q8IVH2 680 aaPredicted RBP8.57□□□□□ -1.04
TCF4-216ENST00000562680 PNMA1Q8ND90 353 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 FERMT2Q96AC1 680 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 H0YHG0 523 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 USP8P40818 1118 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 SARNPP82979 210 aaKnown RBP8.57□□□□□ -1.04
TCF4-216ENST00000562680 NONOQ15233 471 aaKnown RBP eCLIP8.57□□□□□ -1.04
TCF4-216ENST00000562680 SYCP1Q15431 976 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 TSGA10IPQ3SY00 556 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 RNF26Q9BY78 433 aaPredicted RBP8.57□□□□□ -1.04
TCF4-216ENST00000562680 COL14A1Q05707 1796 aaKnown RBP8.57□□□□□ -1.04
TCF4-216ENST00000562680 PLCD1P51178 756 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 FAM160A1Q05DH4 1040 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 ASPRV1Q53RT3 343 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 WDR78Q5VTH9 848 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 STYK1Q6J9G0 422 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 TAOK3Q9H2K8 898 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 SERPINB13Q9UIV8 391 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 CYP2E1P05181 493 aaPredicted RBP8.57□□□□□ -1.04
TCF4-216ENST00000562680 SETSIPP0DME0 302 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 ADCY7P51828 1080 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 MECOMQ03112 1051 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 CFAP100Q494V2 611 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 CIAPIN1Q6FI81 312 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 FAM200AQ8TCP9 573 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 TTC14Q96N46 770 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 PUS7LQ9H0K6 701 aaKnown RBP8.57□□□□□ -1.04
TCF4-216ENST00000562680 DACT1Q9NYF0 836 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 ATP6V0A2Q9Y487 856 aa8.57□□□□□ -1.04
TCF4-216ENST00000562680 FAM208AQ9UK61 1670 aaKnown RBP8.56□□□□□ -1.04
TCF4-216ENST00000562680 TBCAO75347 108 aaKnown RBP8.56□□□□□ -1.04
TCF4-216ENST00000562680 RXRAP19793 462 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 CERKLQ49MI3 558 aaPredicted RBP8.56□□□□□ -1.04
TCF4-216ENST00000562680 SYNE4Q8N205 404 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 LCORLQ8N3X6 602 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 TANGO6Q9C0B7 1094 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 DNAI2Q9GZS0 605 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 ALDH8A1Q9H2A2 487 aaPredicted RBP8.56□□□□□ -1.04
TCF4-216ENST00000562680 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.56□□□□□ -1.04
TCF4-216ENST00000562680 NCOA5Q9HCD5 579 aaKnown RBP8.56□□□□□ -1.04
TCF4-216ENST00000562680 ZNF609O15014 1411 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 GSDMDP57764 484 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 DMTNQ08495 405 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 ZSCAN23Q3MJ62 389 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 TPCN1Q9ULQ1 816 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 SETD1AO15047 1707 aaKnown RBP8.56□□□□□ -1.04
TCF4-216ENST00000562680 KIF2AO00139 706 aaPredicted RBP8.56□□□□□ -1.04
TCF4-216ENST00000562680 PDIA3P30101 505 aaKnown RBP8.56□□□□□ -1.04
TCF4-216ENST00000562680 RDXP35241 583 aaKnown RBP8.56□□□□□ -1.04
TCF4-216ENST00000562680 DGKHQ86XP1 1220 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 CKAP2LQ8IYA6 745 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 ZNF397Q8NF99 534 aaPredicted RBP8.56□□□□□ -1.04
TCF4-216ENST00000562680 STAG1Q8WVM7 1258 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 KANSL2Q9H9L4 492 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 EXOC1Q9NV70 894 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 PLSCR1O15162 318 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 DKC1O60832 514 aaKnown RBP eCLIP8.56□□□□□ -1.04
TCF4-216ENST00000562680 ZBED4O75132 1171 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 APOA5Q6Q788 366 aa8.56□□□□□ -1.04
TCF4-216ENST00000562680 FAM84BQ96KN1 310 aaPredicted RBP8.56□□□□□ -1.04
TCF4-216ENST00000562680 RRAGBQ5VZM2 374 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 PI16Q6UXB8 463 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 GPCPD1Q9NPB8 672 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 PI4KBQ9UBF8 816 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 IDEP14735 1019 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 ICA1Q05084 483 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 TTC38Q5R3I4 469 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 SH2B2O14492 632 aaPredicted RBP8.55□□□□□ -1.04
TCF4-216ENST00000562680 PSMA7O14818 248 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 SFPQP23246 707 aaKnown RBP eCLIP8.55□□□□□ -1.04
TCF4-216ENST00000562680 TRAPPC10P48553 1259 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 SCNN1DP51172 638 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 EN1Q05925 392 aaPredicted RBP8.55□□□□□ -1.04
TCF4-216ENST00000562680 CETN1Q12798 172 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 TCP10Q12799 353 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 SLC15A2Q16348 729 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 HAUS3Q68CZ6 603 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 REXO1Q8N1G1 1221 aaKnown RBP8.55□□□□□ -1.04
TCF4-216ENST00000562680 CTAGE1Q96RT6 745 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms