RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 METTL24Q5JXM2 366 aa7.23□□□□□ -1.25
CDH13-206ENST00000562601 PA2G4Q9UQ80 394 aaKnown RBP7.23□□□□□ -1.25
CDH13-206ENST00000562601 JAG2Q9Y219 1238 aa7.23□□□□□ -1.25
CDH13-206ENST00000562601 LEMD3Q9Y2U8 911 aa7.23□□□□□ -1.25
CDH13-206ENST00000562601 RIPOR2Q9Y4F9 1068 aa7.23□□□□□ -1.25
CDH13-206ENST00000562601 PSME4Q14997 1843 aa7.22□□□□□ -1.25
CDH13-206ENST00000562601 MED23Q9ULK4 1368 aa7.22□□□□□ -1.25
CDH13-206ENST00000562601 CEP350Q5VT06 3117 aa7.22□□□□□ -1.25
CDH13-206ENST00000562601 POM121CA8CG34 1229 aa7.22□□□□□ -1.25
CDH13-206ENST00000562601 LZTS3O60299 673 aaPredicted RBP7.22□□□□□ -1.25
CDH13-206ENST00000562601 GNAI2P04899 355 aa7.22□□□□□ -1.25
CDH13-206ENST00000562601 ADD1P35611 737 aaKnown RBP7.22□□□□□ -1.25
CDH13-206ENST00000562601 PTGIRP43119 386 aa7.22□□□□□ -1.25
CDH13-206ENST00000562601 RELBQ01201 579 aa7.22□□□□□ -1.25
CDH13-206ENST00000562601 PTPN12Q05209 780 aaKnown RBP7.22□□□□□ -1.25
CDH13-206ENST00000562601 C20orf194Q5TEA3 1177 aa7.22□□□□□ -1.25
CDH13-206ENST00000562601 MAP1SQ66K74 1059 aaPredicted RBP7.22□□□□□ -1.25
CDH13-206ENST00000562601 PLPP7Q8NBV4 271 aa7.22□□□□□ -1.25
CDH13-206ENST00000562601 SMC1BQ8NDV3 1235 aa7.22□□□□□ -1.25
CDH13-206ENST00000562601 GPRC5DQ9NZD1 345 aa7.22□□□□□ -1.25
CDH13-206ENST00000562601 CNOT7Q9UIV1 285 aaKnown RBP7.22□□□□□ -1.25
CDH13-206ENST00000562601 ZNF646O15015 1829 aaPredicted RBP7.22□□□□□ -1.25
CDH13-206ENST00000562601 USP17L3A6NCW0 530 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 USP17L4A6NCW7 530 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 SRGAP3O43295 1099 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 MAN1A2O60476 641 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 EGFRP00533 1210 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 VIL1P09327 827 aaKnown RBP7.21□□□□□ -1.26
CDH13-206ENST00000562601 SNRPBP14678 240 aaKnown RBP7.21□□□□□ -1.26
CDH13-206ENST00000562601 GYG1P46976 350 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 HIRAP54198 1017 aaPredicted RBP7.21□□□□□ -1.26
CDH13-206ENST00000562601 GTF2IP78347 998 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 FMR1Q06787 632 aaKnown RBP eCLIP7.21□□□□□ -1.26
CDH13-206ENST00000562601 TBC1D10BQ4KMP7 808 aaPredicted RBP7.21□□□□□ -1.26
CDH13-206ENST00000562601 OXLD1Q5BKU9 147 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 USP17L1Q7RTZ2 530 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 ATG9AQ7Z3C6 839 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 TRPM4Q8TD43 1214 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 AGBL1Q96MI9 1066 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 COA1Q9GZY4 146 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 IQSEC3Q9UPP2 1182 aaPredicted RBP7.21□□□□□ -1.26
CDH13-206ENST00000562601 MROH5Q6ZUA9 1318 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 IRS2Q9Y4H2 1338 aa7.21□□□□□ -1.26
CDH13-206ENST00000562601 ADAMTSL1Q8N6G6 1762 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 PNMA6EA0A0J9YXQ4 647 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 TTLL8A6PVC2 850 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 H7C1D1 291 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 EYA2O00167 538 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 ZBTB7BO15156 539 aaPredicted RBP7.2□□□□□ -1.26
CDH13-206ENST00000562601 TRAK2O60296 914 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 SKIP12755 728 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 HSPA6P17066 643 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 SCTRP47872 440 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 FSTL1Q12841 308 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 UBE4AQ14139 1066 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 DACT2Q5SW24 774 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 TTLL5Q6EMB2 1281 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 TREML4Q6UXN2 200 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 DLK2Q6UY11 383 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 ZNF804AQ7Z570 1209 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 PODNQ7Z5L7 613 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 PNMA8AQ86V59 439 aaPredicted RBP7.2□□□□□ -1.26
CDH13-206ENST00000562601 LDHDQ86WU2 507 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 VGLL2Q8N8G2 317 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 GLMNQ92990 594 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 FAM84BQ96KN1 310 aaPredicted RBP7.2□□□□□ -1.26
CDH13-206ENST00000562601 CD209Q9NNX6 404 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 POLMQ9NP87 494 aaPredicted RBP7.2□□□□□ -1.26
CDH13-206ENST00000562601 ADARB2Q9NS39 739 aaKnown RBP7.2□□□□□ -1.26
CDH13-206ENST00000562601 HDAC5Q9UQL6 1122 aa7.2□□□□□ -1.26
CDH13-206ENST00000562601 F8W031 263 aaPredicted RBP7.19□□□□□ -1.26
CDH13-206ENST00000562601 TRAF5O00463 557 aa7.19□□□□□ -1.26
CDH13-206ENST00000562601 PDE8BO95263 885 aa7.19□□□□□ -1.26
CDH13-206ENST00000562601 GNRH1P01148 92 aa7.19□□□□□ -1.26
CDH13-206ENST00000562601 HIBADHP31937 336 aaKnown RBP7.19□□□□□ -1.26
CDH13-206ENST00000562601 TFCP2Q12800 502 aa7.19□□□□□ -1.26
CDH13-206ENST00000562601 CHAF1AQ13111 956 aaPredicted RBP7.19□□□□□ -1.26
CDH13-206ENST00000562601 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.19□□□□□ -1.26
CDH13-206ENST00000562601 EML3Q32P44 896 aa7.19□□□□□ -1.26
CDH13-206ENST00000562601 C15orf52Q6ZUT6 534 aaKnown RBP7.19□□□□□ -1.26
CDH13-206ENST00000562601 USP50Q70EL3 339 aaPredicted RBP7.19□□□□□ -1.26
CDH13-206ENST00000562601 VPS37DQ86XT2 251 aa7.19□□□□□ -1.26
CDH13-206ENST00000562601 CNTROBQ8N137 903 aa7.19□□□□□ -1.26
CDH13-206ENST00000562601 DPF2Q92785 391 aa7.19□□□□□ -1.26
CDH13-206ENST00000562601 CALR3Q96L12 384 aaKnown RBP7.19□□□□□ -1.26
CDH13-206ENST00000562601 ZMYND15Q9H091 742 aa7.19□□□□□ -1.26
CDH13-206ENST00000562601 OSBPL3Q9H4L5 887 aa7.19□□□□□ -1.26
CDH13-206ENST00000562601 ZNF395Q9H8N7 513 aaPredicted RBP7.19□□□□□ -1.26
CDH13-206ENST00000562601 SCAF8Q9UPN6 1271 aaKnown RBP7.19□□□□□ -1.26
CDH13-206ENST00000562601 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.19□□□□□ -1.26
CDH13-206ENST00000562601 ASTN2O75129 1339 aaPredicted RBP7.19□□□□□ -1.26
CDH13-206ENST00000562601 MYH13Q9UKX3 1938 aa7.19□□□□□ -1.26
CDH13-206ENST00000562601 CIAO1O76071 339 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 IL1R1P14778 569 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 FGFR2P21802 821 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 RPS12P25398 132 aaKnown RBP7.18□□□□□ -1.26
CDH13-206ENST00000562601 ADORA1P30542 326 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 IL15P40933 162 aaPredicted RBP7.18□□□□□ -1.26
CDH13-206ENST00000562601 TIMM10P62072 90 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 ATP8B2P98198 1209 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms