RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 CYP2D7A0A087X1C5 515 aa16.65■□□□□ 0.26
IFT140-205ENST00000561954 PTPRAP18433 802 aa16.65■□□□□ 0.26
IFT140-205ENST00000561954 ABCB5Q2M3G0 1257 aa16.65■□□□□ 0.26
IFT140-205ENST00000561954 KIAA1211Q6ZU35 1233 aa16.65■□□□□ 0.26
IFT140-205ENST00000561954 CCDC17Q96LX7 622 aa16.65■□□□□ 0.26
IFT140-205ENST00000561954 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
IFT140-205ENST00000561954 ANAPC4Q9UJX5 808 aa16.65■□□□□ 0.26
IFT140-205ENST00000561954 LAMA4Q16363 1823 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 ATAD5Q96QE3 1844 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 GDF11O95390 407 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 FGAP02671 866 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 SLURP2P0DP57 97 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 PCP11498 1178 aaKnown RBP16.64■□□□□ 0.25
IFT140-205ENST00000561954 CDK8P49336 464 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 NT5C2P49902 561 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 GTF2A2P52657 109 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 INHBEP58166 350 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 MAP2K1Q02750 393 aaPredicted RBP16.64■□□□□ 0.25
IFT140-205ENST00000561954 SNAPC2Q13487 334 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 JMYQ8N9B5 988 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 DYNLL2Q96FJ2 89 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 ESYT1Q9BSJ8 1104 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 MKNK2Q9HBH9 465 aa16.64■□□□□ 0.25
IFT140-205ENST00000561954 USP17L5A8MUK1 530 aa16.63■□□□□ 0.25
IFT140-205ENST00000561954 AOC2O75106 756 aa16.63■□□□□ 0.25
IFT140-205ENST00000561954 GH2P01242 217 aa16.63■□□□□ 0.25
IFT140-205ENST00000561954 MKRN3Q13064 507 aaKnown RBP16.63■□□□□ 0.25
IFT140-205ENST00000561954 IMMTQ16891 758 aaKnown RBP16.63■□□□□ 0.25
IFT140-205ENST00000561954 TMEM179Q6ZVK1 233 aa16.63■□□□□ 0.25
IFT140-205ENST00000561954 SLC44A5Q8NCS7 719 aa16.63■□□□□ 0.25
IFT140-205ENST00000561954 RNF41Q9H4P4 317 aaPredicted RBP16.63■□□□□ 0.25
IFT140-205ENST00000561954 ZHX2Q9Y6X8 837 aa16.63■□□□□ 0.25
IFT140-205ENST00000561954 MPHOSPH10O00566 681 aaKnown RBP16.62■□□□□ 0.25
IFT140-205ENST00000561954 CXCL11O14625 94 aa16.62■□□□□ 0.25
IFT140-205ENST00000561954 ZNF213O14771 459 aa16.62■□□□□ 0.25
IFT140-205ENST00000561954 CETPP11597 493 aa16.62■□□□□ 0.25
IFT140-205ENST00000561954 GJA5P36382 358 aa16.62■□□□□ 0.25
IFT140-205ENST00000561954 KIF23Q02241 960 aaPredicted RBP16.62■□□□□ 0.25
IFT140-205ENST00000561954 EVX2Q03828 476 aa16.62■□□□□ 0.25
IFT140-205ENST00000561954 ZNF280CQ8ND82 737 aa16.62■□□□□ 0.25
IFT140-205ENST00000561954 CNKSR2Q8WXI2 1034 aa16.62■□□□□ 0.25
IFT140-205ENST00000561954 BEGAINQ9BUH8 593 aa16.62■□□□□ 0.25
IFT140-205ENST00000561954 IL25Q9H293 177 aa16.62■□□□□ 0.25
IFT140-205ENST00000561954 KCNH4Q9UQ05 1017 aa16.62■□□□□ 0.25
IFT140-205ENST00000561954 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
IFT140-205ENST00000561954 PLIN4Q96Q06 1357 aa16.62■□□□□ 0.25
IFT140-205ENST00000561954 MYH8P13535 1937 aa16.61■□□□□ 0.25
IFT140-205ENST00000561954 IRF6O14896 467 aa16.61■□□□□ 0.25
IFT140-205ENST00000561954 CA12O43570 354 aa16.61■□□□□ 0.25
IFT140-205ENST00000561954 RRP1BQ14684 758 aaKnown RBP16.61■□□□□ 0.25
IFT140-205ENST00000561954 RAB3GAP1Q15042 981 aa16.61■□□□□ 0.25
IFT140-205ENST00000561954 OTUD7BQ6GQQ9 843 aa16.61■□□□□ 0.25
IFT140-205ENST00000561954 WDR18Q9BV38 432 aa16.61■□□□□ 0.25
IFT140-205ENST00000561954 SH2D4AQ9H788 454 aa16.61■□□□□ 0.25
IFT140-205ENST00000561954 ANO2Q9NQ90 1003 aa16.61■□□□□ 0.25
IFT140-205ENST00000561954 CCL15-CCL14A0A0B4J2E2 113 aa16.6■□□□□ 0.25
IFT140-205ENST00000561954 ALDH1A1P00352 501 aa16.6■□□□□ 0.25
IFT140-205ENST00000561954 CCL15Q16663 113 aa16.6■□□□□ 0.25
IFT140-205ENST00000561954 PPP4R3BQ5MIZ7 849 aa16.6■□□□□ 0.25
IFT140-205ENST00000561954 ZNF444Q8N0Y2 327 aaPredicted RBP16.6■□□□□ 0.25
IFT140-205ENST00000561954 STAG1Q8WVM7 1258 aa16.6■□□□□ 0.25
IFT140-205ENST00000561954 FEZ1Q99689 392 aa16.6■□□□□ 0.25
IFT140-205ENST00000561954 AFG3L2Q9Y4W6 797 aa16.6■□□□□ 0.25
IFT140-205ENST00000561954 A0A0G2JLL6 359 aaPredicted RBP16.59■□□□□ 0.25
IFT140-205ENST00000561954 TESPA1A2RU30 521 aaPredicted RBP16.59■□□□□ 0.25
IFT140-205ENST00000561954 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
IFT140-205ENST00000561954 ORC4O43929 436 aa16.59■□□□□ 0.25
IFT140-205ENST00000561954 EIF5BO60841 1220 aaKnown RBP16.59■□□□□ 0.25
IFT140-205ENST00000561954 AKR1B1P15121 316 aa16.59■□□□□ 0.25
IFT140-205ENST00000561954 RASA1P20936 1047 aa16.59■□□□□ 0.25
IFT140-205ENST00000561954 ICA1Q05084 483 aa16.59■□□□□ 0.25
IFT140-205ENST00000561954 FASTKD5Q7L8L6 764 aaKnown RBP16.59■□□□□ 0.25
IFT140-205ENST00000561954 PRRT2Q7Z6L0 340 aaPredicted RBP16.59■□□□□ 0.25
IFT140-205ENST00000561954 ARHGEF10LQ9HCE6 1279 aa16.59■□□□□ 0.25
IFT140-205ENST00000561954 ZCCHC17Q9NP64 241 aaKnown RBP16.59■□□□□ 0.25
IFT140-205ENST00000561954 SAGE1Q9NXZ1 904 aa16.59■□□□□ 0.25
IFT140-205ENST00000561954 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.59■□□□□ 0.25
IFT140-205ENST00000561954 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
IFT140-205ENST00000561954 REC8O95072 547 aa16.58■□□□□ 0.24
IFT140-205ENST00000561954 TSPY3P0CV98 308 aa16.58■□□□□ 0.24
IFT140-205ENST00000561954 TSPY8P0CW00 308 aa16.58■□□□□ 0.24
IFT140-205ENST00000561954 TM4SF4P48230 202 aa16.58■□□□□ 0.24
IFT140-205ENST00000561954 USP14P54578 494 aa16.58■□□□□ 0.24
IFT140-205ENST00000561954 HAND2P61296 217 aa16.58■□□□□ 0.24
IFT140-205ENST00000561954 CTDSPL2Q05D32 466 aa16.58■□□□□ 0.24
IFT140-205ENST00000561954 AKNAD1Q5T1N1 836 aa16.58■□□□□ 0.24
IFT140-205ENST00000561954 MFSD6Q6ZSS7 791 aa16.58■□□□□ 0.24
IFT140-205ENST00000561954 STK11IPQ8N1F8 1099 aa16.58■□□□□ 0.24
IFT140-205ENST00000561954 MAP4K1Q92918 833 aa16.58■□□□□ 0.24
IFT140-205ENST00000561954 MS4A4AQ96JQ5 239 aa16.58■□□□□ 0.24
IFT140-205ENST00000561954 KANSL2Q9H9L4 492 aa16.58■□□□□ 0.24
IFT140-205ENST00000561954 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.58■□□□□ 0.24
IFT140-205ENST00000561954 PHIPQ8WWQ0 1821 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 LOC285556D6RIA3 1793 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 TSPY2A6NKD2 308 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 C19orf81C9J6K1 198 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 USP17L10C9JJH3 530 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 SMIM22K7EJ46 135 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 PRDM1O75626 825 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 FGRP09769 529 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms