RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 DDX19BQ9UMR2 479 aa10.06□□□□□ -0.8
GINS3-204ENST00000561952 MYPNQ86TC9 1320 aa10.06□□□□□ -0.8
GINS3-204ENST00000561952 TBC1D12O60347 775 aa10.05□□□□□ -0.8
GINS3-204ENST00000561952 OSBPP22059 807 aa10.05□□□□□ -0.8
GINS3-204ENST00000561952 TIE1P35590 1138 aa10.05□□□□□ -0.8
GINS3-204ENST00000561952 HMGCS2P54868 508 aa10.05□□□□□ -0.8
GINS3-204ENST00000561952 MAP3K10Q02779 954 aa10.05□□□□□ -0.8
GINS3-204ENST00000561952 SPP2Q13103 211 aa10.05□□□□□ -0.8
GINS3-204ENST00000561952 NBPF11Q86T75 865 aa10.05□□□□□ -0.8
GINS3-204ENST00000561952 RAET1EQ8TD07 263 aa10.05□□□□□ -0.8
GINS3-204ENST00000561952 ARMC5Q96C12 935 aa10.05□□□□□ -0.8
GINS3-204ENST00000561952 ZNF333Q96JL9 665 aa10.05□□□□□ -0.8
GINS3-204ENST00000561952 ZNF512BQ96KM6 892 aaPredicted RBP10.05□□□□□ -0.8
GINS3-204ENST00000561952 TAOK2Q9UL54 1235 aa10.05□□□□□ -0.8
GINS3-204ENST00000561952 DOCK3Q8IZD9 2030 aa10.05□□□□□ -0.8
GINS3-204ENST00000561952 MYH7P12883 1935 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 MYH8P13535 1937 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 HMMRO75330 724 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 MAP4K4O95819 1239 aaPredicted RBP10.04□□□□□ -0.8
GINS3-204ENST00000561952 HLA-DOAP06340 250 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 IFIT2P09913 472 aaKnown RBP10.04□□□□□ -0.8
GINS3-204ENST00000561952 BCRP11274 1271 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 CAP2P40123 477 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 PRKCZQ05513 592 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 MAP3K12Q12852 859 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 HSP90AB4PQ58FF6 505 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 SIRT2Q8IXJ6 389 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 CLASRPQ8N2M8 674 aaKnown RBP10.04□□□□□ -0.8
GINS3-204ENST00000561952 ANKRD13CQ8N6S4 541 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 ZNF280CQ8ND82 737 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 KIF1BPQ96EK5 621 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 EDC3Q96F86 508 aaKnown RBP10.04□□□□□ -0.8
GINS3-204ENST00000561952 DNAJC18Q9H819 358 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 PI4KBQ9UBF8 816 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 BIN2Q9UBW5 565 aaPredicted RBP10.04□□□□□ -0.8
GINS3-204ENST00000561952 SRRDQ9UH36 339 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 HERC5Q9UII4 1024 aaKnown RBP10.04□□□□□ -0.8
GINS3-204ENST00000561952 AGTPBP1Q9UPW5 1226 aa10.04□□□□□ -0.8
GINS3-204ENST00000561952 USP17L5A8MUK1 530 aa10.03□□□□□ -0.8
GINS3-204ENST00000561952 GOLIM4O00461 696 aa10.03□□□□□ -0.8
GINS3-204ENST00000561952 HOXD10P28358 340 aa10.03□□□□□ -0.8
GINS3-204ENST00000561952 FCGRTP55899 365 aa10.03□□□□□ -0.8
GINS3-204ENST00000561952 PPP4CP60510 307 aa10.03□□□□□ -0.8
GINS3-204ENST00000561952 JAG1P78504 1218 aa10.03□□□□□ -0.8
GINS3-204ENST00000561952 MTMR2Q13614 643 aa10.03□□□□□ -0.8
GINS3-204ENST00000561952 MTFR1Q15390 333 aa10.03□□□□□ -0.8
GINS3-204ENST00000561952 DDX60LQ5H9U9 1706 aaKnown RBP10.03□□□□□ -0.8
GINS3-204ENST00000561952 RPAP2Q8IXW5 612 aaPredicted RBP10.03□□□□□ -0.8
GINS3-204ENST00000561952 DHX36Q9H2U1 1008 aaKnown RBP10.03□□□□□ -0.8
GINS3-204ENST00000561952 ZBTB40Q9NUA8 1239 aa10.03□□□□□ -0.8
GINS3-204ENST00000561952 GABRQQ9UN88 632 aa10.03□□□□□ -0.8
GINS3-204ENST00000561952 BAZ2AQ9UIF9 1905 aaKnown RBP10.03□□□□□ -0.8
GINS3-204ENST00000561952 TNPO2O14787 897 aaKnown RBP10.02□□□□□ -0.81
GINS3-204ENST00000561952 SMARCA5O60264 1052 aaPredicted RBP10.02□□□□□ -0.81
GINS3-204ENST00000561952 SEC24BO95487 1268 aa10.02□□□□□ -0.81
GINS3-204ENST00000561952 ZYXQ15942 572 aaKnown RBP10.02□□□□□ -0.81
GINS3-204ENST00000561952 SLFNL1Q499Z3 407 aa10.02□□□□□ -0.81
GINS3-204ENST00000561952 BOLA2Q9H3K6 86 aa10.02□□□□□ -0.81
GINS3-204ENST00000561952 AS3MTQ9HBK9 375 aa10.02□□□□□ -0.81
GINS3-204ENST00000561952 PNMA3Q9UL41 463 aa10.02□□□□□ -0.81
GINS3-204ENST00000561952 ZBTB21Q9ULJ3 1066 aa10.02□□□□□ -0.81
GINS3-204ENST00000561952 MAGEB6P1A0A0J9YX57 407 aa10.01□□□□□ -0.81
GINS3-204ENST00000561952 MAP3K13O43283 966 aa10.01□□□□□ -0.81
GINS3-204ENST00000561952 PEX10O60683 326 aa10.01□□□□□ -0.81
GINS3-204ENST00000561952 GNRH1P01148 92 aa10.01□□□□□ -0.81
GINS3-204ENST00000561952 GH2P01242 217 aa10.01□□□□□ -0.81
GINS3-204ENST00000561952 ASNSP08243 561 aa10.01□□□□□ -0.81
GINS3-204ENST00000561952 ELNP15502 786 aa10.01□□□□□ -0.81
GINS3-204ENST00000561952 PDE6AP16499 860 aa10.01□□□□□ -0.81
GINS3-204ENST00000561952 GRK4P32298 578 aa10.01□□□□□ -0.81
GINS3-204ENST00000561952 RAB3GAP1Q15042 981 aa10.01□□□□□ -0.81
GINS3-204ENST00000561952 SLC9C2Q5TAH2 1124 aa10.01□□□□□ -0.81
GINS3-204ENST00000561952 PRPF38BQ5VTL8 546 aaKnown RBP10.01□□□□□ -0.81
GINS3-204ENST00000561952 PROCA1Q8NCQ7 364 aaPredicted RBP10.01□□□□□ -0.81
GINS3-204ENST00000561952 TMOD4Q9NZQ9 345 aa10.01□□□□□ -0.81
GINS3-204ENST00000561952 ZNF532Q9HCE3 1301 aa10.01□□□□□ -0.81
GINS3-204ENST00000561952 RAB11FIP3O75154 756 aa10□□□□□ -0.81
GINS3-204ENST00000561952 CHGBP05060 677 aa10□□□□□ -0.81
GINS3-204ENST00000561952 POLR3DP05423 398 aaPredicted RBP10□□□□□ -0.81
GINS3-204ENST00000561952 FLT3LGP49771 235 aa10□□□□□ -0.81
GINS3-204ENST00000561952 PRMT2P55345 433 aa10□□□□□ -0.81
GINS3-204ENST00000561952 IRX3P78415 501 aaPredicted RBP10□□□□□ -0.81
GINS3-204ENST00000561952 PABPC4Q13310 644 aaKnown RBP eCLIP10□□□□□ -0.81
GINS3-204ENST00000561952 TTF1Q15361 905 aaPredicted RBP10□□□□□ -0.81
GINS3-204ENST00000561952 FOXP4Q8IVH2 680 aaPredicted RBP10□□□□□ -0.81
GINS3-204ENST00000561952 LCORLQ8N3X6 602 aa10□□□□□ -0.81
GINS3-204ENST00000561952 SDR42E1Q8WUS8 393 aa10□□□□□ -0.81
GINS3-204ENST00000561952 FEZ1Q99689 392 aa10□□□□□ -0.81
GINS3-204ENST00000561952 RIOK1Q9BRS2 568 aaKnown RBP10□□□□□ -0.81
GINS3-204ENST00000561952 TBC1D2Q9BYX2 928 aa10□□□□□ -0.81
GINS3-204ENST00000561952 ASCC2Q9H1I8 757 aaPredicted RBP10□□□□□ -0.81
GINS3-204ENST00000561952 CHMP4BQ9H444 224 aaKnown RBP10□□□□□ -0.81
GINS3-204ENST00000561952 ARMT1Q9H993 441 aa10□□□□□ -0.81
GINS3-204ENST00000561952 PAG1Q9NWQ8 432 aa10□□□□□ -0.81
GINS3-204ENST00000561952 SLC45A1Q9Y2W3 748 aa10□□□□□ -0.81
GINS3-204ENST00000561952 USP17L10C9JJH3 530 aa9.99□□□□□ -0.81
GINS3-204ENST00000561952 MPHOSPH10O00566 681 aaKnown RBP9.99□□□□□ -0.81
GINS3-204ENST00000561952 ADCY3O60266 1144 aa9.99□□□□□ -0.81
GINS3-204ENST00000561952 MBD4O95243 580 aa9.99□□□□□ -0.81
GINS3-204ENST00000561952 CCL5P13501 91 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms