RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 SDF4Q9BRK5 362 aa11.33□□□□□ -0.59
SMG1-205ENST00000561947 ANO10Q9NW15 660 aa11.33□□□□□ -0.59
SMG1-205ENST00000561947 GGA1Q9UJY5 639 aa11.33□□□□□ -0.59
SMG1-205ENST00000561947 LTBP1Q14766 1721 aa11.33□□□□□ -0.6
SMG1-205ENST00000561947 AKAP17AQ02040 695 aaKnown RBP11.33□□□□□ -0.6
SMG1-205ENST00000561947 FUT2Q10981 343 aa11.33□□□□□ -0.6
SMG1-205ENST00000561947 TROAPQ12815 778 aa11.33□□□□□ -0.6
SMG1-205ENST00000561947 CD209Q9NNX6 404 aa11.33□□□□□ -0.6
SMG1-205ENST00000561947 MCM9Q9NXL9 1143 aa11.33□□□□□ -0.6
SMG1-205ENST00000561947 MKRN1Q9UHC7 482 aaKnown RBP11.33□□□□□ -0.6
SMG1-205ENST00000561947 ANKRD31Q8N7Z5 1873 aa11.33□□□□□ -0.6
SMG1-205ENST00000561947 PRPF3O43395 683 aaKnown RBP11.32□□□□□ -0.6
SMG1-205ENST00000561947 ZNF202O95125 648 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 HMGB2P26583 209 aaKnown RBP11.32□□□□□ -0.6
SMG1-205ENST00000561947 PPP4CP60510 307 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 IQCB1Q15051 598 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 GRIK5Q16478 980 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 TXNRD1Q16881 649 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 SH3RF3Q8TEJ3 882 aaPredicted RBP11.32□□□□□ -0.6
SMG1-205ENST00000561947 CRAMP1Q96RY5 1269 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.32□□□□□ -0.6
SMG1-205ENST00000561947 PLEKHA8P1O95397 391 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 BAG3O95817 575 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 LDHCP07864 332 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 USP17L8P0C7I0 530 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 IL1R1P14778 569 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 USP5P45974 858 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 NT5C2P49902 561 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 DIXDC1Q155Q3 683 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 FAM47AQ5JRC9 791 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 NOL10Q9BSC4 688 aaKnown RBP11.32□□□□□ -0.6
SMG1-205ENST00000561947 PODXL2Q9NZ53 605 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 ROBO3Q96MS0 1386 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.32□□□□□ -0.6
SMG1-205ENST00000561947 FAM237AA0A1B0GTK4 181 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 KLRG2A4D1S0 409 aaPredicted RBP11.32□□□□□ -0.6
SMG1-205ENST00000561947 CUTAO60888 179 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 TOB1P50616 345 aaPredicted RBP11.32□□□□□ -0.6
SMG1-205ENST00000561947 PKN1Q16512 942 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 RILPL1Q5EBL4 403 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 C12orf60Q5U649 245 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 SHC4Q6S5L8 630 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 TMTC3Q6ZXV5 915 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 PROM2Q8N271 834 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 MPNDQ8N594 471 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 TIGD1Q96MW7 591 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 KIAA1468Q9P260 1216 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 HPSEQ9Y251 543 aa11.32□□□□□ -0.6
SMG1-205ENST00000561947 NRXN2Q9P2S2 1712 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 TSPY2A6NKD2 308 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 NMT2O60551 498 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 XBP1P17861 261 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 RESP18Q5W5W9 173 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 ERCC4Q92889 916 aaPredicted RBP11.31□□□□□ -0.6
SMG1-205ENST00000561947 DDX60LQ5H9U9 1706 aaKnown RBP11.31□□□□□ -0.6
SMG1-205ENST00000561947 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 GOLGA6L19H0YKK7 550 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 OFD1O75665 1012 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 TPM3P06753 285 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 SYKP43405 635 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 ZNF75DP51815 510 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 PLA2G4DQ86XP0 818 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 CERS3Q8IU89 383 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 CEP57L1Q8IYX8 460 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 CTCFLQ8NI51 663 aaPredicted RBP11.31□□□□□ -0.6
SMG1-205ENST00000561947 TBC1D16Q8TBP0 767 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 SHISA4Q96DD7 197 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 RTFDC1Q9BY42 306 aaPredicted RBP11.31□□□□□ -0.6
SMG1-205ENST00000561947 CNTNAP5Q8WYK1 1306 aa11.31□□□□□ -0.6
SMG1-205ENST00000561947 A0A087WWV3 80 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 KIAA2012Q0VF49 1180 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 NR5A1Q13285 461 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 TMC4Q7Z404 712 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 AMOTL1Q8IY63 956 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 KRI1Q8N9T8 703 aaKnown RBP11.3□□□□□ -0.6
SMG1-205ENST00000561947 OXER1Q8TDS5 423 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 CLIC6Q96NY7 704 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 VPS54Q9P1Q0 977 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 POLLQ9UGP5 575 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 EP400Q96L91 3159 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 SLC4A8Q2Y0W8 1093 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.3□□□□□ -0.6
SMG1-205ENST00000561947 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.3□□□□□ -0.6
SMG1-205ENST00000561947 SPC24Q8NBT2 197 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 ZNF830Q96NB3 372 aaPredicted RBP11.3□□□□□ -0.6
SMG1-205ENST00000561947 PHF20Q9BVI0 1012 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 TRIM5Q9C035 493 aa11.3□□□□□ -0.6
SMG1-205ENST00000561947 NAT10Q9H0A0 1025 aaKnown RBP11.3□□□□□ -0.6
SMG1-205ENST00000561947 TTC12Q9H892 705 aaPredicted RBP11.3□□□□□ -0.6
SMG1-205ENST00000561947 V9GY48 417 aaPredicted RBP11.3□□□□□ -0.6
SMG1-205ENST00000561947 KRT2P35908 639 aa11.29□□□□□ -0.6
SMG1-205ENST00000561947 ZRSR1Q15695 479 aaKnown RBP11.29□□□□□ -0.6
SMG1-205ENST00000561947 RCSD1Q6JBY9 416 aa11.29□□□□□ -0.6
SMG1-205ENST00000561947 SARM1Q6SZW1 724 aa11.29□□□□□ -0.6
SMG1-205ENST00000561947 DHX40Q8IX18 779 aaKnown RBP11.29□□□□□ -0.6
SMG1-205ENST00000561947 TGFBRAP1Q8WUH2 860 aa11.29□□□□□ -0.6
SMG1-205ENST00000561947 FOCADQ5VW36 1801 aa11.29□□□□□ -0.6
SMG1-205ENST00000561947 GPR75-ASB3A0A0A6YYF3 556 aa11.29□□□□□ -0.6
SMG1-205ENST00000561947 BECN2A8MW95 431 aa11.29□□□□□ -0.6
SMG1-205ENST00000561947 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms