RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 MAPKAPK5Q8IW41 473 aa17.8■□□□□ 0.44
SPG7-205ENST00000561945 DPF3Q92784 378 aa17.8■□□□□ 0.44
SPG7-205ENST00000561945 C1orf115Q9H7X2 142 aa17.8■□□□□ 0.44
SPG7-205ENST00000561945 TLR7Q9NYK1 1049 aaKnown RBP17.8■□□□□ 0.44
SPG7-205ENST00000561945 OS9Q13438 667 aaPredicted RBP17.79■□□□□ 0.44
SPG7-205ENST00000561945 MTMR2Q13614 643 aa17.79■□□□□ 0.44
SPG7-205ENST00000561945 TATDN1Q6P1N9 297 aa17.79■□□□□ 0.44
SPG7-205ENST00000561945 PALD1Q9ULE6 856 aa17.79■□□□□ 0.44
SPG7-205ENST00000561945 ZBTB21Q9ULJ3 1066 aa17.79■□□□□ 0.44
SPG7-205ENST00000561945 USP17L10C9JJH3 530 aa17.78■□□□□ 0.44
SPG7-205ENST00000561945 HMGCRP04035 888 aa17.78■□□□□ 0.44
SPG7-205ENST00000561945 CEP85Q6P2H3 762 aa17.78■□□□□ 0.44
SPG7-205ENST00000561945 ITPRIPQ8IWB1 547 aa17.78■□□□□ 0.44
SPG7-205ENST00000561945 FTSJ3Q8IY81 847 aaKnown RBP17.78■□□□□ 0.44
SPG7-205ENST00000561945 ANKLE1Q8NAG6 615 aa17.78■□□□□ 0.44
SPG7-205ENST00000561945 DEFB118Q96PH6 123 aa17.78■□□□□ 0.44
SPG7-205ENST00000561945 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.78■□□□□ 0.44
SPG7-205ENST00000561945 EHD4Q9H223 541 aa17.78■□□□□ 0.44
SPG7-205ENST00000561945 XRCC5P13010 732 aaKnown RBP17.77■□□□□ 0.44
SPG7-205ENST00000561945 DYNLL1P63167 89 aaKnown RBP17.77■□□□□ 0.44
SPG7-205ENST00000561945 CHRDL2Q6WN34 429 aa17.77■□□□□ 0.44
SPG7-205ENST00000561945 C12orf42Q96LP6 360 aa17.77■□□□□ 0.44
SPG7-205ENST00000561945 P2RX7Q99572 595 aaKnown RBP17.77■□□□□ 0.44
SPG7-205ENST00000561945 TMOD4Q9NZQ9 345 aa17.77■□□□□ 0.44
SPG7-205ENST00000561945 RBM27Q9P2N5 1060 aaKnown RBP17.77■□□□□ 0.44
SPG7-205ENST00000561945 NR2E3Q9Y5X4 410 aa17.77■□□□□ 0.44
SPG7-205ENST00000561945 RPTORQ8N122 1335 aa17.76■□□□□ 0.43
SPG7-205ENST00000561945 COL6A3P12111 3177 aa17.76■□□□□ 0.43
SPG7-205ENST00000561945 HLA-DOAP06340 250 aa17.76■□□□□ 0.43
SPG7-205ENST00000561945 CYP7A1P22680 504 aa17.76■□□□□ 0.43
SPG7-205ENST00000561945 HERVK_113P62684 666 aa17.76■□□□□ 0.43
SPG7-205ENST00000561945 SHROOM1Q2M3G4 852 aaPredicted RBP17.76■□□□□ 0.43
SPG7-205ENST00000561945 MAP3K21Q5TCX8 1036 aa17.76■□□□□ 0.43
SPG7-205ENST00000561945 POTEEQ6S8J3 1075 aa17.76■□□□□ 0.43
SPG7-205ENST00000561945 ERC1Q8IUD2 1116 aa17.76■□□□□ 0.43
SPG7-205ENST00000561945 CRACR2BQ8N4Y2 399 aaPredicted RBP17.76■□□□□ 0.43
SPG7-205ENST00000561945 GTF3C2Q8WUA4 911 aaPredicted RBP17.76■□□□□ 0.43
SPG7-205ENST00000561945 CCDC8Q9H0W5 538 aaPredicted RBP17.76■□□□□ 0.43
SPG7-205ENST00000561945 TXNRD2Q9NNW7 524 aa17.76■□□□□ 0.43
SPG7-205ENST00000561945 EMILIN3Q9NT22 766 aa17.76■□□□□ 0.43
SPG7-205ENST00000561945 RBPJLQ9UBG7 517 aa17.76■□□□□ 0.43
SPG7-205ENST00000561945 A0A1W2PPC1 479 aa17.75■□□□□ 0.43
SPG7-205ENST00000561945 TFRCP02786 760 aaKnown RBP17.75■□□□□ 0.43
SPG7-205ENST00000561945 IRX3P78415 501 aaPredicted RBP17.75■□□□□ 0.43
SPG7-205ENST00000561945 HNRNPUQ00839 825 aaKnown RBP eCLIP17.75■□□□□ 0.43
SPG7-205ENST00000561945 GPRC5AQ8NFJ5 357 aa17.75■□□□□ 0.43
SPG7-205ENST00000561945 USP6NLQ92738 828 aa17.75■□□□□ 0.43
SPG7-205ENST00000561945 NAV1Q8NEY1 1877 aa17.74■□□□□ 0.43
SPG7-205ENST00000561945 IDH1O75874 414 aaKnown RBP17.74■□□□□ 0.43
SPG7-205ENST00000561945 GDF11O95390 407 aa17.74■□□□□ 0.43
SPG7-205ENST00000561945 MNX1P50219 401 aaPredicted RBP17.74■□□□□ 0.43
SPG7-205ENST00000561945 SOCS4Q8WXH5 440 aa17.74■□□□□ 0.43
SPG7-205ENST00000561945 TRIB2Q92519 343 aa17.74■□□□□ 0.43
SPG7-205ENST00000561945 RIOK1Q9BRS2 568 aaKnown RBP17.74■□□□□ 0.43
SPG7-205ENST00000561945 ANTXR1Q9H6X2 564 aa17.74■□□□□ 0.43
SPG7-205ENST00000561945 SERPINB13Q9UIV8 391 aa17.74■□□□□ 0.43
SPG7-205ENST00000561945 ZBED9Q6R2W3 1325 aa17.73■□□□□ 0.43
SPG7-205ENST00000561945 MAPK4P31152 587 aa17.73■□□□□ 0.43
SPG7-205ENST00000561945 USP17L2Q6R6M4 530 aa17.73■□□□□ 0.43
SPG7-205ENST00000561945 TRMT44Q8IYL2 757 aaKnown RBP17.73■□□□□ 0.43
SPG7-205ENST00000561945 MAGEB6Q8N7X4 407 aa17.73■□□□□ 0.43
SPG7-205ENST00000561945 PAWRQ96IZ0 340 aaKnown RBP17.73■□□□□ 0.43
SPG7-205ENST00000561945 TRIM34Q9BYJ4 488 aa17.73■□□□□ 0.43
SPG7-205ENST00000561945 HMX1Q9NP08 348 aaPredicted RBP17.73■□□□□ 0.43
SPG7-205ENST00000561945 SAP30BPQ9UHR5 308 aaKnown RBP17.73■□□□□ 0.43
SPG7-205ENST00000561945 GH2P01242 217 aa17.72■□□□□ 0.43
SPG7-205ENST00000561945 ERVK-9P63128 1117 aa17.72■□□□□ 0.43
SPG7-205ENST00000561945 ERVK-24P63145 666 aa17.72■□□□□ 0.43
SPG7-205ENST00000561945 MAP3K12Q12852 859 aa17.72■□□□□ 0.43
SPG7-205ENST00000561945 TRIM32Q13049 653 aa17.72■□□□□ 0.43
SPG7-205ENST00000561945 Q3C1V9 767 aa17.72■□□□□ 0.43
SPG7-205ENST00000561945 LBX2Q6XYB7 198 aa17.72■□□□□ 0.43
SPG7-205ENST00000561945 NECAB2Q7Z6G3 386 aa17.72■□□□□ 0.43
SPG7-205ENST00000561945 TTC6Q86TZ1 520 aa17.72■□□□□ 0.43
SPG7-205ENST00000561945 MIGA1Q8NAN2 632 aa17.72■□□□□ 0.43
SPG7-205ENST00000561945 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.72■□□□□ 0.43
SPG7-205ENST00000561945 NUDT12Q9BQG2 462 aa17.72■□□□□ 0.43
SPG7-205ENST00000561945 TAOK2Q9UL54 1235 aa17.72■□□□□ 0.43
SPG7-205ENST00000561945 OGDHLQ9ULD0 1010 aa17.72■□□□□ 0.43
SPG7-205ENST00000561945 FRMPD3Q5JV73 1810 aa17.71■□□□□ 0.43
SPG7-205ENST00000561945 EVI5O60447 810 aa17.71■□□□□ 0.43
SPG7-205ENST00000561945 GABPAQ06546 454 aa17.71■□□□□ 0.43
SPG7-205ENST00000561945 HSP90AB4PQ58FF6 505 aa17.71■□□□□ 0.43
SPG7-205ENST00000561945 MORN1Q5T089 497 aa17.71■□□□□ 0.43
SPG7-205ENST00000561945 RHPN1Q8TCX5 695 aa17.71■□□□□ 0.43
SPG7-205ENST00000561945 DIS3LQ8TF46 1054 aaKnown RBP17.71■□□□□ 0.43
SPG7-205ENST00000561945 KIAA1683Q9H0B3 1180 aa17.71■□□□□ 0.43
SPG7-205ENST00000561945 EXOC6BQ9Y2D4 811 aa17.71■□□□□ 0.43
SPG7-205ENST00000561945 NDUFB9Q9Y6M9 179 aa17.71■□□□□ 0.43
SPG7-205ENST00000561945 PEX10O60683 326 aa17.7■□□□□ 0.42
SPG7-205ENST00000561945 SHMT1P34896 483 aa17.7■□□□□ 0.42
SPG7-205ENST00000561945 USP5P45974 858 aa17.7■□□□□ 0.42
SPG7-205ENST00000561945 USP14P54578 494 aa17.7■□□□□ 0.42
SPG7-205ENST00000561945 TTF1Q15361 905 aaPredicted RBP17.7■□□□□ 0.42
SPG7-205ENST00000561945 GPR142Q7Z601 462 aa17.7■□□□□ 0.42
SPG7-205ENST00000561945 AACSQ86V21 672 aa17.7■□□□□ 0.42
SPG7-205ENST00000561945 MIER1Q8N108 512 aa17.7■□□□□ 0.42
SPG7-205ENST00000561945 PORCNQ9H237 461 aa17.7■□□□□ 0.42
SPG7-205ENST00000561945 RABGAP1Q9Y3P9 1069 aa17.7■□□□□ 0.42
SPG7-205ENST00000561945 A0A0G2JMZ2 1700 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms