RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 PTPRAP18433 802 aa19.45■□□□□ 0.7
USB1-204ENST00000561568 INHBEP58166 350 aa19.45■□□□□ 0.7
USB1-204ENST00000561568 RRP1BQ14684 758 aaKnown RBP19.45■□□□□ 0.7
USB1-204ENST00000561568 IMMTQ16891 758 aaKnown RBP19.45■□□□□ 0.7
USB1-204ENST00000561568 ABCB5Q2M3G0 1257 aa19.45■□□□□ 0.7
USB1-204ENST00000561568 WNK4Q96J92 1243 aa19.45■□□□□ 0.7
USB1-204ENST00000561568 ZHX2Q9Y6X8 837 aa19.45■□□□□ 0.7
USB1-204ENST00000561568 U3KPZ7 1027 aaPredicted RBP19.45■□□□□ 0.7
USB1-204ENST00000561568 NAV1Q8NEY1 1877 aa19.44■□□□□ 0.7
USB1-204ENST00000561568 USP17L5A8MUK1 530 aa19.44■□□□□ 0.7
USB1-204ENST00000561568 SMIM22K7EJ46 135 aa19.44■□□□□ 0.7
USB1-204ENST00000561568 PCP11498 1178 aaKnown RBP19.44■□□□□ 0.7
USB1-204ENST00000561568 PTH1RQ03431 593 aa19.44■□□□□ 0.7
USB1-204ENST00000561568 SLC44A5Q8NCS7 719 aa19.44■□□□□ 0.7
USB1-204ENST00000561568 BAZ2AQ9UIF9 1905 aaKnown RBP19.44■□□□□ 0.7
USB1-204ENST00000561568 ROBO3Q96MS0 1386 aa19.44■□□□□ 0.7
USB1-204ENST00000561568 GDF11O95390 407 aa19.43■□□□□ 0.7
USB1-204ENST00000561568 CTDSPL2Q05D32 466 aa19.43■□□□□ 0.7
USB1-204ENST00000561568 PPIL2Q13356 520 aa19.43■□□□□ 0.7
USB1-204ENST00000561568 STK11IPQ8N1F8 1099 aa19.43■□□□□ 0.7
USB1-204ENST00000561568 OTUD5Q96G74 571 aa19.43■□□□□ 0.7
USB1-204ENST00000561568 RNF41Q9H4P4 317 aaPredicted RBP19.43■□□□□ 0.7
USB1-204ENST00000561568 AS3MTQ9HBK9 375 aa19.43■□□□□ 0.7
USB1-204ENST00000561568 ANO2Q9NQ90 1003 aa19.43■□□□□ 0.7
USB1-204ENST00000561568 MANSC4A6NHS7 340 aaPredicted RBP19.42■□□□□ 0.7
USB1-204ENST00000561568 MPHOSPH10O00566 681 aaKnown RBP19.42■□□□□ 0.7
USB1-204ENST00000561568 CXCL11O14625 94 aa19.42■□□□□ 0.7
USB1-204ENST00000561568 EIF5BO60841 1220 aaKnown RBP19.42■□□□□ 0.7
USB1-204ENST00000561568 GH2P01242 217 aa19.42■□□□□ 0.7
USB1-204ENST00000561568 FGRP09769 529 aa19.42■□□□□ 0.7
USB1-204ENST00000561568 GTF2A2P52657 109 aa19.42■□□□□ 0.7
USB1-204ENST00000561568 MFSD6Q6ZSS7 791 aa19.42■□□□□ 0.7
USB1-204ENST00000561568 TMEM179Q6ZVK1 233 aa19.42■□□□□ 0.7
USB1-204ENST00000561568 ZBTB21Q9ULJ3 1066 aa19.42■□□□□ 0.7
USB1-204ENST00000561568 AFG3L2Q9Y4W6 797 aa19.42■□□□□ 0.7
USB1-204ENST00000561568 IRF6O14896 467 aa19.41■□□□□ 0.7
USB1-204ENST00000561568 RASA1P20936 1047 aa19.41■□□□□ 0.7
USB1-204ENST00000561568 NT5C2P49902 561 aa19.41■□□□□ 0.7
USB1-204ENST00000561568 JAG1P78504 1218 aa19.41■□□□□ 0.7
USB1-204ENST00000561568 KIF23Q02241 960 aaPredicted RBP19.41■□□□□ 0.7
USB1-204ENST00000561568 AKNAD1Q5T1N1 836 aa19.41■□□□□ 0.7
USB1-204ENST00000561568 CNKSR2Q8WXI2 1034 aa19.41■□□□□ 0.7
USB1-204ENST00000561568 WDR18Q9BV38 432 aa19.41■□□□□ 0.7
USB1-204ENST00000561568 LSG1Q9H089 658 aaKnown RBP19.41■□□□□ 0.7
USB1-204ENST00000561568 DDX60LQ5H9U9 1706 aaKnown RBP19.41■□□□□ 0.7
USB1-204ENST00000561568 SIPA1L1O43166 1804 aa19.4■□□□□ 0.7
USB1-204ENST00000561568 ORC4O43929 436 aa19.4■□□□□ 0.7
USB1-204ENST00000561568 AOC2O75106 756 aa19.4■□□□□ 0.7
USB1-204ENST00000561568 REC8O95072 547 aa19.4■□□□□ 0.7
USB1-204ENST00000561568 GJA5P36382 358 aa19.4■□□□□ 0.7
USB1-204ENST00000561568 HAND2P61296 217 aa19.4■□□□□ 0.7
USB1-204ENST00000561568 MKRN3Q13064 507 aaKnown RBP19.4■□□□□ 0.7
USB1-204ENST00000561568 SNAPC2Q13487 334 aa19.4■□□□□ 0.7
USB1-204ENST00000561568 RAB3GAP1Q15042 981 aa19.4■□□□□ 0.7
USB1-204ENST00000561568 ZNF280CQ8ND82 737 aa19.4■□□□□ 0.7
USB1-204ENST00000561568 KCNH4Q9UQ05 1017 aa19.4■□□□□ 0.7
USB1-204ENST00000561568 PRDM1O75626 825 aa19.39■□□□□ 0.69
USB1-204ENST00000561568 CETPP11597 493 aa19.39■□□□□ 0.69
USB1-204ENST00000561568 AKR1B1P15121 316 aa19.39■□□□□ 0.69
USB1-204ENST00000561568 TM4SF4P48230 202 aa19.39■□□□□ 0.69
USB1-204ENST00000561568 SREBF2Q12772 1141 aa19.39■□□□□ 0.69
USB1-204ENST00000561568 STAG1Q8WVM7 1258 aa19.39■□□□□ 0.69
USB1-204ENST00000561568 KANSL2Q9H9L4 492 aa19.39■□□□□ 0.69
USB1-204ENST00000561568 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.39■□□□□ 0.69
USB1-204ENST00000561568 RBM8AQ9Y5S9 174 aaKnown RBP19.39■□□□□ 0.69
USB1-204ENST00000561568 TESPA1A2RU30 521 aaPredicted RBP19.38■□□□□ 0.69
USB1-204ENST00000561568 C19orf81C9J6K1 198 aa19.38■□□□□ 0.69
USB1-204ENST00000561568 EPB41L2O43491 1005 aaKnown RBP19.38■□□□□ 0.69
USB1-204ENST00000561568 TSPY3P0CV98 308 aa19.38■□□□□ 0.69
USB1-204ENST00000561568 TSPY8P0CW00 308 aa19.38■□□□□ 0.69
USB1-204ENST00000561568 TFAP4Q01664 338 aa19.38■□□□□ 0.69
USB1-204ENST00000561568 MAP2K1Q02750 393 aaPredicted RBP19.38■□□□□ 0.69
USB1-204ENST00000561568 SPP2Q13103 211 aa19.38■□□□□ 0.69
USB1-204ENST00000561568 SEPT2Q15019 361 aa19.38■□□□□ 0.69
USB1-204ENST00000561568 MS4A4AQ96JQ5 239 aa19.38■□□□□ 0.69
USB1-204ENST00000561568 INCENPQ9NQS7 918 aa19.38■□□□□ 0.69
USB1-204ENST00000561568 TOMM22Q9NS69 142 aa19.38■□□□□ 0.69
USB1-204ENST00000561568 USP17L10C9JJH3 530 aa19.37■□□□□ 0.69
USB1-204ENST00000561568 RANBP6O60518 1105 aaKnown RBP19.37■□□□□ 0.69
USB1-204ENST00000561568 GUCY1A2P33402 732 aa19.37■□□□□ 0.69
USB1-204ENST00000561568 NECTIN1Q15223 517 aa19.37■□□□□ 0.69
USB1-204ENST00000561568 PPP4R3BQ5MIZ7 849 aa19.37■□□□□ 0.69
USB1-204ENST00000561568 RNF20Q5VTR2 975 aa19.37■□□□□ 0.69
USB1-204ENST00000561568 OTUD7BQ6GQQ9 843 aa19.37■□□□□ 0.69
USB1-204ENST00000561568 FASTKD5Q7L8L6 764 aaKnown RBP19.37■□□□□ 0.69
USB1-204ENST00000561568 JMYQ8N9B5 988 aa19.37■□□□□ 0.69
USB1-204ENST00000561568 NEDD1Q8NHV4 660 aa19.37■□□□□ 0.69
USB1-204ENST00000561568 ZIC5Q96T25 663 aa19.37■□□□□ 0.69
USB1-204ENST00000561568 CNNM2Q9H8M5 875 aa19.37■□□□□ 0.69
USB1-204ENST00000561568 TRIM75PA6NK02 468 aa19.36■□□□□ 0.69
USB1-204ENST00000561568 TSPY2A6NKD2 308 aa19.36■□□□□ 0.69
USB1-204ENST00000561568 CYP21A2P08686 494 aa19.36■□□□□ 0.69
USB1-204ENST00000561568 SHROOM1Q2M3G4 852 aaPredicted RBP19.36■□□□□ 0.69
USB1-204ENST00000561568 ESR2Q92731 530 aa19.36■□□□□ 0.69
USB1-204ENST00000561568 KRT23Q9C075 422 aa19.36■□□□□ 0.69
USB1-204ENST00000561568 NBPF3Q9H094 633 aa19.36■□□□□ 0.69
USB1-204ENST00000561568 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.36■□□□□ 0.69
USB1-204ENST00000561568 BACE1P56817 501 aa19.35■□□□□ 0.69
USB1-204ENST00000561568 TRDNQ13061 729 aa19.35■□□□□ 0.69
USB1-204ENST00000561568 FAM47AQ5JRC9 791 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms