RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ADGRA1Q86SQ6 560 aa14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 MAPKAPK5Q8IW41 473 aa14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 CRACR2BQ8N4Y2 399 aaPredicted RBP14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 GPRC5AQ8NFJ5 357 aa14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 DIS3LQ8TF46 1054 aaKnown RBP14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 P2RX7Q99572 595 aaKnown RBP14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 DBNDD2Q9BQY9 259 aa14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 NBPF3Q9H094 633 aa14.5□□□□□ -0.09
CARMIL3-204ENST00000561354 BMP8BP34820 402 aa14.49□□□□□ -0.09
CARMIL3-204ENST00000561354 MNX1P50219 401 aaPredicted RBP14.49□□□□□ -0.09
CARMIL3-204ENST00000561354 HERVK_113P62684 666 aa14.49□□□□□ -0.09
CARMIL3-204ENST00000561354 TRIM32Q13049 653 aa14.49□□□□□ -0.09
CARMIL3-204ENST00000561354 TMEM57Q8N5G2 664 aa14.49□□□□□ -0.09
CARMIL3-204ENST00000561354 SOCS4Q8WXH5 440 aa14.49□□□□□ -0.09
CARMIL3-204ENST00000561354 TRIB2Q92519 343 aa14.49□□□□□ -0.09
CARMIL3-204ENST00000561354 NUDT12Q9BQG2 462 aa14.49□□□□□ -0.09
CARMIL3-204ENST00000561354 TRIM34Q9BYJ4 488 aa14.49□□□□□ -0.09
CARMIL3-204ENST00000561354 TXNRD2Q9NNW7 524 aa14.49□□□□□ -0.09
CARMIL3-204ENST00000561354 STAP2Q9UGK3 403 aa14.49□□□□□ -0.09
CARMIL3-204ENST00000561354 OGDHLQ9ULD0 1010 aa14.49□□□□□ -0.09
CARMIL3-204ENST00000561354 PALD1Q9ULE6 856 aa14.49□□□□□ -0.09
CARMIL3-204ENST00000561354 PLXNB2O15031 1838 aa14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 SURF6O75683 361 aaKnown RBP14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 CYP2B6P20813 491 aa14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 MAPK4P31152 587 aa14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 OS9Q13438 667 aaPredicted RBP14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 TRMT44Q8IYL2 757 aaKnown RBP14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 GTF3C2Q8WUA4 911 aaPredicted RBP14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 GDF15Q99988 308 aa14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 RBPJLQ9UBG7 517 aa14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 ZBTB21Q9ULJ3 1066 aa14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 NOP58Q9Y2X3 529 aaKnown RBP14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 ALPK3Q96L96 1907 aa14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 CDK5RAP2Q96SN8 1893 aa14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 FOCADQ5VW36 1801 aa14.48□□□□□ -0.09
CARMIL3-204ENST00000561354 HLA-DOAP06340 250 aa14.47□□□□□ -0.09
CARMIL3-204ENST00000561354 ZAP70P43403 619 aa14.47□□□□□ -0.09
CARMIL3-204ENST00000561354 CERS3Q8IU89 383 aa14.47□□□□□ -0.09
CARMIL3-204ENST00000561354 USP6NLQ92738 828 aa14.47□□□□□ -0.09
CARMIL3-204ENST00000561354 C11orf49Q9H6J7 331 aa14.47□□□□□ -0.09
CARMIL3-204ENST00000561354 PIH1D3Q9NQM4 214 aaKnown RBP14.47□□□□□ -0.09
CARMIL3-204ENST00000561354 SOX1O00570 391 aaPredicted RBP14.46□□□□□ -0.09
CARMIL3-204ENST00000561354 GDF11O95390 407 aa14.46□□□□□ -0.09
CARMIL3-204ENST00000561354 PRKAR2AP13861 404 aaKnown RBP14.46□□□□□ -0.09
CARMIL3-204ENST00000561354 CYP7A1P22680 504 aa14.46□□□□□ -0.09
CARMIL3-204ENST00000561354 ERVK-9P63128 1117 aa14.46□□□□□ -0.09
CARMIL3-204ENST00000561354 ERVK-24P63145 666 aa14.46□□□□□ -0.09
CARMIL3-204ENST00000561354 PDE3AQ14432 1141 aa14.46□□□□□ -0.09
CARMIL3-204ENST00000561354 SHROOM1Q2M3G4 852 aaPredicted RBP14.46□□□□□ -0.09
CARMIL3-204ENST00000561354 Q3C1V9 767 aa14.46□□□□□ -0.09
CARMIL3-204ENST00000561354 USP17L2Q6R6M4 530 aa14.46□□□□□ -0.09
CARMIL3-204ENST00000561354 C7orf61Q8IZ16 206 aa14.46□□□□□ -0.09
CARMIL3-204ENST00000561354 EMILIN3Q9NT22 766 aa14.46□□□□□ -0.09
CARMIL3-204ENST00000561354 DBNLQ9UJU6 430 aaKnown RBP14.46□□□□□ -0.09
CARMIL3-204ENST00000561354 RANBP2P49792 3224 aaKnown RBP14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 PEX10O60683 326 aa14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 DYNLL1P63167 89 aaKnown RBP14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 MORN1Q5T089 497 aa14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 GPR153Q6NV75 609 aa14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 TATDN1Q6P1N9 297 aa14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 TMED8Q6PL24 325 aaPredicted RBP14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 POTEEQ6S8J3 1075 aa14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 GPR142Q7Z601 462 aa14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 CCAR1Q8IX12 1150 aaKnown RBP14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 C12orf42Q96LP6 360 aa14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 EHD4Q9H223 541 aa14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 PORCNQ9H237 461 aa14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 SAP30BPQ9UHR5 308 aaKnown RBP14.45□□□□□ -0.1
CARMIL3-204ENST00000561354 SZT2Q5T011 3432 aa14.44□□□□□ -0.1
CARMIL3-204ENST00000561354 MYO5AQ9Y4I1 1855 aaKnown RBP14.44□□□□□ -0.1
CARMIL3-204ENST00000561354 DDX60LQ5H9U9 1706 aaKnown RBP14.44□□□□□ -0.1
CARMIL3-204ENST00000561354 GH2P01242 217 aa14.44□□□□□ -0.1
CARMIL3-204ENST00000561354 ZKSCAN1P17029 563 aaPredicted RBP14.44□□□□□ -0.1
CARMIL3-204ENST00000561354 RGS2P41220 211 aa14.44□□□□□ -0.1
CARMIL3-204ENST00000561354 PLEKHH3Q7Z736 793 aa14.44□□□□□ -0.1
CARMIL3-204ENST00000561354 EAF2Q96CJ1 260 aaPredicted RBP14.44□□□□□ -0.1
CARMIL3-204ENST00000561354 LRCH3Q96II8 777 aa14.44□□□□□ -0.1
CARMIL3-204ENST00000561354 SERPINB13Q9UIV8 391 aa14.44□□□□□ -0.1
CARMIL3-204ENST00000561354 ZMYND8Q9ULU4 1186 aaPredicted RBP14.44□□□□□ -0.1
CARMIL3-204ENST00000561354 USP17L15C9J2P7 530 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 USP17L13C9JLJ4 530 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 USP17L11C9JVI0 530 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 USP17L18D6R9N7 530 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 USP17L22D6RA61 530 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 USP17L17D6RBQ6 530 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 USP17L19D6RCP7 530 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 USP17L20D6RJB6 530 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 IDH1O75874 414 aaKnown RBP14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 COL6A1P12109 1028 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 CACNB2Q08289 660 aaPredicted RBP14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 USP17L24Q0WX57 530 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 APBA2Q99767 749 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 PAGR1Q9BTK6 254 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 CCDC8Q9H0W5 538 aaPredicted RBP14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 C1orf115Q9H7X2 142 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 TLR7Q9NYK1 1049 aaKnown RBP14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 RABGAP1Q9Y3P9 1069 aa14.43□□□□□ -0.1
CARMIL3-204ENST00000561354 PFASO15067 1338 aa14.42□□□□□ -0.1
CARMIL3-204ENST00000561354 USP5P45974 858 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms