RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 BOLA2Q9H3K6 86 aa19.38■□□□□ 0.69
LMX1B-204ENST00000561065 MYPNQ86TC9 1320 aa19.37■□□□□ 0.69
LMX1B-204ENST00000561065 ASNSP08243 561 aa19.37■□□□□ 0.69
LMX1B-204ENST00000561065 PRKCZQ05513 592 aa19.37■□□□□ 0.69
LMX1B-204ENST00000561065 LCORLQ8N3X6 602 aa19.37■□□□□ 0.69
LMX1B-204ENST00000561065 WDR18Q9BV38 432 aa19.37■□□□□ 0.69
LMX1B-204ENST00000561065 PLXNB2O15031 1838 aa19.37■□□□□ 0.69
LMX1B-204ENST00000561065 MAGEB6P1A0A0J9YX57 407 aa19.36■□□□□ 0.69
LMX1B-204ENST00000561065 FMNL1O95466 1100 aaPredicted RBP19.36■□□□□ 0.69
LMX1B-204ENST00000561065 MYCP01106 439 aaPredicted RBP19.36■□□□□ 0.69
LMX1B-204ENST00000561065 ATP5JP18859 108 aa19.36■□□□□ 0.69
LMX1B-204ENST00000561065 EN2P19622 333 aaPredicted RBP19.36■□□□□ 0.69
LMX1B-204ENST00000561065 PRMT2P55345 433 aa19.36■□□□□ 0.69
LMX1B-204ENST00000561065 SMCR8Q8TEV9 937 aaPredicted RBP19.36■□□□□ 0.69
LMX1B-204ENST00000561065 HAUS7Q99871 368 aa19.36■□□□□ 0.69
LMX1B-204ENST00000561065 LRRCC1Q9C099 1032 aa19.36■□□□□ 0.69
LMX1B-204ENST00000561065 EHD4Q9H223 541 aa19.36■□□□□ 0.69
LMX1B-204ENST00000561065 AS3MTQ9HBK9 375 aa19.36■□□□□ 0.69
LMX1B-204ENST00000561065 PAG1Q9NWQ8 432 aa19.36■□□□□ 0.69
LMX1B-204ENST00000561065 GABRQQ9UN88 632 aa19.36■□□□□ 0.69
LMX1B-204ENST00000561065 ADD2P35612 726 aa19.35■□□□□ 0.69
LMX1B-204ENST00000561065 PLCD1P51178 756 aa19.35■□□□□ 0.69
LMX1B-204ENST00000561065 TATDN1Q6P1N9 297 aa19.35■□□□□ 0.69
LMX1B-204ENST00000561065 ANKRD13CQ8N6S4 541 aa19.35■□□□□ 0.69
LMX1B-204ENST00000561065 SDR42E1Q8WUS8 393 aa19.35■□□□□ 0.69
LMX1B-204ENST00000561065 TRIM34Q9BYJ4 488 aa19.35■□□□□ 0.69
LMX1B-204ENST00000561065 GH2P01242 217 aa19.34■□□□□ 0.69
LMX1B-204ENST00000561065 SHMT1P34896 483 aa19.34■□□□□ 0.69
LMX1B-204ENST00000561065 FCGRTP55899 365 aa19.34■□□□□ 0.69
LMX1B-204ENST00000561065 BACE1P56817 501 aa19.34■□□□□ 0.69
LMX1B-204ENST00000561065 ASCC2Q9H1I8 757 aaPredicted RBP19.34■□□□□ 0.69
LMX1B-204ENST00000561065 SERPINB13Q9UIV8 391 aa19.34■□□□□ 0.69
LMX1B-204ENST00000561065 PNMA3Q9UL41 463 aa19.34■□□□□ 0.69
LMX1B-204ENST00000561065 GABPAQ06546 454 aa19.33■□□□□ 0.69
LMX1B-204ENST00000561065 MTFR1Q15390 333 aa19.33■□□□□ 0.69
LMX1B-204ENST00000561065 FAM110CQ1W6H9 321 aa19.33■□□□□ 0.69
LMX1B-204ENST00000561065 ARMT1Q9H993 441 aa19.33■□□□□ 0.69
LMX1B-204ENST00000561065 GINM1Q9NU53 330 aa19.33■□□□□ 0.69
LMX1B-204ENST00000561065 PCDHB15Q9Y5E8 787 aa19.33■□□□□ 0.69
LMX1B-204ENST00000561065 PEX10O60683 326 aa19.32■□□□□ 0.68
LMX1B-204ENST00000561065 CYP2D6P10635 497 aa19.32■□□□□ 0.68
LMX1B-204ENST00000561065 RRP1P56182 461 aaKnown RBP19.32■□□□□ 0.68
LMX1B-204ENST00000561065 TSHZ3Q63HK5 1081 aa19.32■□□□□ 0.68
LMX1B-204ENST00000561065 NBPF11Q86T75 865 aa19.32■□□□□ 0.68
LMX1B-204ENST00000561065 CRNKL1Q9BZJ0 848 aaKnown RBP19.32■□□□□ 0.68
LMX1B-204ENST00000561065 DCTPP1Q9H773 170 aa19.32■□□□□ 0.68
LMX1B-204ENST00000561065 DCP1AQ9NPI6 582 aaPredicted RBP19.32■□□□□ 0.68
LMX1B-204ENST00000561065 SMIM22K7EJ46 135 aa19.31■□□□□ 0.68
LMX1B-204ENST00000561065 PRKAB2O43741 272 aa19.31■□□□□ 0.68
LMX1B-204ENST00000561065 MBD4O95243 580 aa19.31■□□□□ 0.68
LMX1B-204ENST00000561065 GRK4P32298 578 aa19.31■□□□□ 0.68
LMX1B-204ENST00000561065 AAMPQ13685 434 aa19.31■□□□□ 0.68
LMX1B-204ENST00000561065 TTC6Q86TZ1 520 aa19.31■□□□□ 0.68
LMX1B-204ENST00000561065 RAET1EQ8TD07 263 aa19.31■□□□□ 0.68
LMX1B-204ENST00000561065 SHISA4Q96DD7 197 aa19.31■□□□□ 0.68
LMX1B-204ENST00000561065 EMILIN3Q9NT22 766 aa19.31■□□□□ 0.68
LMX1B-204ENST00000561065 USP17L10C9JJH3 530 aa19.3■□□□□ 0.68
LMX1B-204ENST00000561065 TNPO2O14787 897 aaKnown RBP19.3■□□□□ 0.68
LMX1B-204ENST00000561065 HOXD10P28358 340 aa19.3■□□□□ 0.68
LMX1B-204ENST00000561065 GUCY1A2P33402 732 aa19.3■□□□□ 0.68
LMX1B-204ENST00000561065 FLT3LGP49771 235 aa19.3■□□□□ 0.68
LMX1B-204ENST00000561065 SLC44A5Q8NCS7 719 aa19.3■□□□□ 0.68
LMX1B-204ENST00000561065 TMEM106CQ9BVX2 250 aa19.3■□□□□ 0.68
LMX1B-204ENST00000561065 MCM9Q9NXL9 1143 aa19.3■□□□□ 0.68
LMX1B-204ENST00000561065 HOXA7P31268 230 aaPredicted RBP19.29■□□□□ 0.68
LMX1B-204ENST00000561065 PABPC4Q13310 644 aaKnown RBP eCLIP19.29■□□□□ 0.68
LMX1B-204ENST00000561065 POTEEQ6S8J3 1075 aa19.29■□□□□ 0.68
LMX1B-204ENST00000561065 TMOD4Q9NZQ9 345 aa19.29■□□□□ 0.68
LMX1B-204ENST00000561065 C19orf81C9J6K1 198 aa19.28■□□□□ 0.68
LMX1B-204ENST00000561065 POLR3DP05423 398 aaPredicted RBP19.28■□□□□ 0.68
LMX1B-204ENST00000561065 GCLCP48506 637 aaPredicted RBP19.28■□□□□ 0.68
LMX1B-204ENST00000561065 CERKLQ49MI3 558 aaPredicted RBP19.28■□□□□ 0.68
LMX1B-204ENST00000561065 PRPF38BQ5VTL8 546 aaKnown RBP19.28■□□□□ 0.68
LMX1B-204ENST00000561065 ACER1Q8TDN7 264 aa19.28■□□□□ 0.68
LMX1B-204ENST00000561065 TXNRD2Q9NNW7 524 aa19.28■□□□□ 0.68
LMX1B-204ENST00000561065 ECHDC1Q9NTX5 307 aa19.28■□□□□ 0.68
LMX1B-204ENST00000561065 MORF4L1Q9UBU8 362 aa19.28■□□□□ 0.68
LMX1B-204ENST00000561065 A0A0G2JMZ2 1700 aa19.28■□□□□ 0.68
LMX1B-204ENST00000561065 PARP14Q460N5 1801 aa19.28■□□□□ 0.68
LMX1B-204ENST00000561065 RLFQ13129 1914 aa19.28■□□□□ 0.68
LMX1B-204ENST00000561065 ELNP15502 786 aa19.27■□□□□ 0.68
LMX1B-204ENST00000561065 HERVK_113P62684 666 aa19.27■□□□□ 0.68
LMX1B-204ENST00000561065 IRX3P78415 501 aaPredicted RBP19.27■□□□□ 0.68
LMX1B-204ENST00000561065 RAB3GAP1Q15042 981 aa19.27■□□□□ 0.68
LMX1B-204ENST00000561065 UBE3CQ15386 1083 aa19.27■□□□□ 0.68
LMX1B-204ENST00000561065 ZYXQ15942 572 aaKnown RBP19.27■□□□□ 0.68
LMX1B-204ENST00000561065 ABCB5Q2M3G0 1257 aa19.27■□□□□ 0.68
LMX1B-204ENST00000561065 SLAIN1Q8ND83 568 aa19.27■□□□□ 0.68
LMX1B-204ENST00000561065 C12orf42Q96LP6 360 aa19.27■□□□□ 0.68
LMX1B-204ENST00000561065 P2RX7Q99572 595 aaKnown RBP19.27■□□□□ 0.68
LMX1B-204ENST00000561065 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.27■□□□□ 0.68
LMX1B-204ENST00000561065 PUS7LQ9H0K6 701 aaKnown RBP19.27■□□□□ 0.68
LMX1B-204ENST00000561065 ZBTB47Q9UFB7 747 aaPredicted RBP19.27■□□□□ 0.68
LMX1B-204ENST00000561065 GREB1LQ9C091 1923 aaPredicted RBP19.27■□□□□ 0.68
LMX1B-204ENST00000561065 CYP2D7A0A087X1C5 515 aa19.26■□□□□ 0.67
LMX1B-204ENST00000561065 USP17L2Q6R6M4 530 aa19.26■□□□□ 0.67
LMX1B-204ENST00000561065 OTUD7AQ8TE49 926 aaPredicted RBP19.26■□□□□ 0.67
LMX1B-204ENST00000561065 DYNLL2Q96FJ2 89 aa19.26■□□□□ 0.67
LMX1B-204ENST00000561065 ADCY3O60266 1144 aa19.25■□□□□ 0.67
LMX1B-204ENST00000561065 CCL5P13501 91 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms