RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	TOMM22	Q9NS69	142 aa		13.38	□□□□□ -0.27
CERS3-208	ENST00000560944	MPHOSPH10	O00566	681 aa	Known RBP	13.37	□□□□□ -0.27
CERS3-208	ENST00000560944	HSPA4	P34932	840 aa		13.37	□□□□□ -0.27
CERS3-208	ENST00000560944	AKNAD1	Q5T1N1	836 aa		13.37	□□□□□ -0.27
CERS3-208	ENST00000560944	DCAF15	Q66K64	600 aa		13.37	□□□□□ -0.27
CERS3-208	ENST00000560944	AMOTL1	Q8IY63	956 aa		13.37	□□□□□ -0.27
CERS3-208	ENST00000560944	STAG1	Q8WVM7	1258 aa		13.37	□□□□□ -0.27
CERS3-208	ENST00000560944	CHMP4C	Q96CF2	233 aa		13.37	□□□□□ -0.27
CERS3-208	ENST00000560944	ZKSCAN3	Q9BRR0	538 aa		13.37	□□□□□ -0.27
CERS3-208	ENST00000560944	LRRC2	Q9BYS8	371 aa		13.37	□□□□□ -0.27
CERS3-208	ENST00000560944	CTNNA3	Q9UI47	895 aa		13.37	□□□□□ -0.27
CERS3-208	ENST00000560944	HERC5	Q9UII4	1024 aa	Known RBP	13.37	□□□□□ -0.27
CERS3-208	ENST00000560944	ZNF112	Q9UJU3	913 aa		13.37	□□□□□ -0.27
CERS3-208	ENST00000560944	ZBTB21	Q9ULJ3	1066 aa		13.37	□□□□□ -0.27
CERS3-208	ENST00000560944	TBC1D12	O60347	775 aa		13.36	□□□□□ -0.27
CERS3-208	ENST00000560944	RANBP6	O60518	1105 aa	Known RBP	13.36	□□□□□ -0.27
CERS3-208	ENST00000560944	KDM4A	O75164	1064 aa		13.36	□□□□□ -0.27
CERS3-208	ENST00000560944	NF2	P35240	595 aa		13.36	□□□□□ -0.27
CERS3-208	ENST00000560944	HUNK	P57058	714 aa		13.36	□□□□□ -0.27
CERS3-208	ENST00000560944	ANTXR2	P58335	489 aa		13.36	□□□□□ -0.27
CERS3-208	ENST00000560944	SEPT2	Q15019	361 aa		13.36	□□□□□ -0.27
CERS3-208	ENST00000560944	CERKL	Q49MI3	558 aa	Predicted RBP	13.36	□□□□□ -0.27
CERS3-208	ENST00000560944	TATDN1	Q6P1N9	297 aa		13.36	□□□□□ -0.27
CERS3-208	ENST00000560944	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.36	□□□□□ -0.27
CERS3-208	ENST00000560944	KCNB2	Q92953	911 aa		13.36	□□□□□ -0.27
CERS3-208	ENST00000560944	MKNK2	Q9HBH9	465 aa		13.36	□□□□□ -0.27
CERS3-208	ENST00000560944	SENP2	Q9HC62	589 aa		13.36	□□□□□ -0.27
CERS3-208	ENST00000560944	CEP350	Q5VT06	3117 aa		13.35	□□□□□ -0.27
CERS3-208	ENST00000560944	PPP1R12B	O60237	982 aa	Predicted RBP	13.35	□□□□□ -0.27
CERS3-208	ENST00000560944	CAP2	P40123	477 aa		13.35	□□□□□ -0.27
CERS3-208	ENST00000560944	IREB2	P48200	963 aa	Known RBP	13.35	□□□□□ -0.27
CERS3-208	ENST00000560944	MAP3K9	P80192	1104 aa		13.35	□□□□□ -0.27
CERS3-208	ENST00000560944	ABCB5	Q2M3G0	1257 aa		13.35	□□□□□ -0.27
CERS3-208	ENST00000560944	LDLRAD1	Q5T700	205 aa		13.35	□□□□□ -0.27
CERS3-208	ENST00000560944	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.35	□□□□□ -0.27
CERS3-208	ENST00000560944	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.35	□□□□□ -0.27
CERS3-208	ENST00000560944	C2orf69	Q8N8R5	385 aa		13.35	□□□□□ -0.27
CERS3-208	ENST00000560944	ACER1	Q8TDN7	264 aa		13.35	□□□□□ -0.27
CERS3-208	ENST00000560944	JAKMIP1	Q96N16	626 aa	Known RBP	13.35	□□□□□ -0.27
CERS3-208	ENST00000560944	ABT1	Q9ULW3	272 aa	Known RBP	13.35	□□□□□ -0.27
CERS3-208	ENST00000560944	TMEM88B	A6NKF7	163 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	ORC4	O43929	436 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	FGR	P09769	529 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	APLP1	P51693	650 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	TFAP4	Q01664	338 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	GRM1	Q13255	1194 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	RAB3GAP1	Q15042	981 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	MAP3K11	Q16584	847 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	MFSD6	Q6ZSS7	791 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	ARMC9	Q7Z3E5	817 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	SIAH1	Q8IUQ4	282 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	SCYL3	Q8IZE3	742 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	OTUD5	Q96G74	571 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	ZIC5	Q96T25	663 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	UPF3B	Q9BZI7	483 aa	Known RBP	13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	IL17RB	Q9NRM6	502 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	SWAP70	Q9UH65	585 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	TLL2	Q9Y6L7	1015 aa		13.34	□□□□□ -0.27
CERS3-208	ENST00000560944	IGKV6D-41	A0A0C4DH26	115 aa		13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	SLC3A2	P08195	630 aa	Known RBP	13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	ECE1	P42892	770 aa		13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	ATP2B2	Q01814	1243 aa		13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	PDE4B	Q07343	736 aa		13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	KIAA1755	Q5JYT7	1200 aa		13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	CYP4F22	Q6NT55	531 aa		13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	SAPCD2	Q86UD0	394 aa		13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	RAB11FIP4	Q86YS3	637 aa		13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	RASAL3	Q86YV0	1011 aa		13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	LRRC47	Q8N1G4	583 aa	Known RBP	13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	CEP95	Q96GE4	821 aa		13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	KIF2C	Q99661	725 aa		13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	PTPRF	P10586	1907 aa		13.33	□□□□□ -0.28
CERS3-208	ENST00000560944	PLIN4	Q96Q06	1357 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944		A0A1W2PRG0	241 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	TSPY2	A6NKD2	308 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	TSPY3	P0CV98	308 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	TSPY8	P0CW00	308 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	PTPRA	P18433	802 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	C1QTNF8	P60827	252 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	ZYX	Q15942	572 aa	Known RBP	13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	NOL9	Q5SY16	702 aa	Known RBP	13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	OPTN	Q96CV9	577 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	HOOK2	Q96ED9	719 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	WNK4	Q96J92	1243 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	LARP6	Q9BRS8	491 aa	Known RBP	13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	C22orf23	Q9BZE7	217 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	ZSWIM5	Q9P217	1185 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	MTMR7	Q9Y216	660 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	CSAD	Q9Y600	493 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	MYH4	Q9Y623	1939 aa		13.32	□□□□□ -0.28
CERS3-208	ENST00000560944	TRIM75P	A6NK02	468 aa		13.31	□□□□□ -0.28
CERS3-208	ENST00000560944	CTNND1	O60716	968 aa	Known RBP	13.31	□□□□□ -0.28
CERS3-208	ENST00000560944	AOC2	O75106	756 aa		13.31	□□□□□ -0.28
CERS3-208	ENST00000560944	CAST	P20810	708 aa	Known RBP	13.31	□□□□□ -0.28
CERS3-208	ENST00000560944	ICA1	Q05084	483 aa		13.31	□□□□□ -0.28
CERS3-208	ENST00000560944	RCSD1	Q6JBY9	416 aa		13.31	□□□□□ -0.28
CERS3-208	ENST00000560944	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.31	□□□□□ -0.28
CERS3-208	ENST00000560944	ANKRD13A	Q8IZ07	590 aa		13.31	□□□□□ -0.28
CERS3-208	ENST00000560944	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.31	□□□□□ -0.28
CERS3-208	ENST00000560944	NEDD1	Q8NHV4	660 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms