RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 CCAR2Q8N163 923 aaKnown RBP16.79■□□□□ 0.28
CRTC3-210ENST00000560927 VPS54Q9P1Q0 977 aa16.79■□□□□ 0.28
CRTC3-210ENST00000560927 SRP68Q9UHB9 627 aaKnown RBP16.79■□□□□ 0.28
CRTC3-210ENST00000560927 CASZ1Q86V15 1759 aa16.79■□□□□ 0.28
CRTC3-210ENST00000560927 PLEKHA8P1O95397 391 aa16.78■□□□□ 0.28
CRTC3-210ENST00000560927 MYL5Q02045 173 aa16.78■□□□□ 0.28
CRTC3-210ENST00000560927 FUT2Q10981 343 aa16.78■□□□□ 0.28
CRTC3-210ENST00000560927 CTR9Q6PD62 1173 aa16.78■□□□□ 0.28
CRTC3-210ENST00000560927 BRIP1Q9BX63 1249 aa16.78■□□□□ 0.28
CRTC3-210ENST00000560927 RNF26Q9BY78 433 aaPredicted RBP16.78■□□□□ 0.28
CRTC3-210ENST00000560927 SCN7AQ01118 1682 aa16.78■□□□□ 0.28
CRTC3-210ENST00000560927 MYH2Q9UKX2 1941 aa16.78■□□□□ 0.28
CRTC3-210ENST00000560927 POLR2DO15514 142 aaKnown RBP16.78■□□□□ 0.28
CRTC3-210ENST00000560927 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
CRTC3-210ENST00000560927 EARS2Q5JPH6 523 aaKnown RBP16.78■□□□□ 0.28
CRTC3-210ENST00000560927 USP49Q70CQ1 688 aa16.78■□□□□ 0.28
CRTC3-210ENST00000560927 FBXO33Q7Z6M2 555 aa16.78■□□□□ 0.28
CRTC3-210ENST00000560927 NSUN4Q96CB9 384 aaKnown RBP16.78■□□□□ 0.28
CRTC3-210ENST00000560927 TFCP2L1Q9NZI6 479 aa16.78■□□□□ 0.28
CRTC3-210ENST00000560927 USP17L12C9JPN9 530 aa16.77■□□□□ 0.28
CRTC3-210ENST00000560927 USP17L21D6R901 530 aa16.77■□□□□ 0.28
CRTC3-210ENST00000560927 MECOMQ03112 1051 aa16.77■□□□□ 0.28
CRTC3-210ENST00000560927 PTPN14Q15678 1187 aa16.77■□□□□ 0.28
CRTC3-210ENST00000560927 GLIPR1L2Q4G1C9 344 aa16.77■□□□□ 0.28
CRTC3-210ENST00000560927 SLC10A5Q5PT55 438 aa16.77■□□□□ 0.28
CRTC3-210ENST00000560927 IFIT1BQ5T764 474 aaKnown RBP16.77■□□□□ 0.28
CRTC3-210ENST00000560927 GRAMD1CQ8IYS0 662 aa16.77■□□□□ 0.28
CRTC3-210ENST00000560927 SERTAD1Q9UHV2 236 aa16.77■□□□□ 0.28
CRTC3-210ENST00000560927 PAXBP1Q9Y5B6 917 aa16.77■□□□□ 0.28
CRTC3-210ENST00000560927 PTPN21Q16825 1174 aa16.77■□□□□ 0.27
CRTC3-210ENST00000560927 PDILTQ8N807 584 aa16.77■□□□□ 0.27
CRTC3-210ENST00000560927 FANCLQ9NW38 375 aa16.77■□□□□ 0.27
CRTC3-210ENST00000560927 NMT2O60551 498 aa16.76■□□□□ 0.27
CRTC3-210ENST00000560927 RPS8P62241 208 aaKnown RBP16.76■□□□□ 0.27
CRTC3-210ENST00000560927 E4F1Q66K89 784 aaPredicted RBP16.76■□□□□ 0.27
CRTC3-210ENST00000560927 AATFQ9NY61 560 aaKnown RBP eCLIP16.76■□□□□ 0.27
CRTC3-210ENST00000560927 V9GY48 417 aaPredicted RBP16.76■□□□□ 0.27
CRTC3-210ENST00000560927 FGRP09769 529 aa16.76■□□□□ 0.27
CRTC3-210ENST00000560927 SFPQP23246 707 aaKnown RBP eCLIP16.76■□□□□ 0.27
CRTC3-210ENST00000560927 AKAP17AQ02040 695 aaKnown RBP16.76■□□□□ 0.27
CRTC3-210ENST00000560927 TROAPQ12815 778 aa16.76■□□□□ 0.27
CRTC3-210ENST00000560927 NAA30Q147X3 362 aaPredicted RBP16.76■□□□□ 0.27
CRTC3-210ENST00000560927 POSTNQ15063 836 aa16.76■□□□□ 0.27
CRTC3-210ENST00000560927 OLFM4Q6UX06 510 aa16.76■□□□□ 0.27
CRTC3-210ENST00000560927 CCDC150Q8NCX0 1101 aa16.76■□□□□ 0.27
CRTC3-210ENST00000560927 CCDC112Q8NEF3 446 aa16.76■□□□□ 0.27
CRTC3-210ENST00000560927 ANKRD7Q92527 254 aa16.76■□□□□ 0.27
CRTC3-210ENST00000560927 BCL11BQ9C0K0 894 aaPredicted RBP16.76■□□□□ 0.27
CRTC3-210ENST00000560927 CSRNP2Q9H175 543 aa16.76■□□□□ 0.27
CRTC3-210ENST00000560927 MAN1B1Q9UKM7 699 aa16.76■□□□□ 0.27
CRTC3-210ENST00000560927 JAG2Q9Y219 1238 aa16.76■□□□□ 0.27
CRTC3-210ENST00000560927 SRPRBQ9Y5M8 271 aaKnown RBP16.76■□□□□ 0.27
CRTC3-210ENST00000560927 CNTNAP4Q9C0A0 1308 aa16.76■□□□□ 0.27
CRTC3-210ENST00000560927 WNT7AO00755 349 aa16.75■□□□□ 0.27
CRTC3-210ENST00000560927 SERPINC1P01008 464 aa16.75■□□□□ 0.27
CRTC3-210ENST00000560927 PRDX5P30044 214 aa16.75■□□□□ 0.27
CRTC3-210ENST00000560927 UBASH3AP57075 661 aa16.75■□□□□ 0.27
CRTC3-210ENST00000560927 NCBP1Q09161 790 aaKnown RBP16.75■□□□□ 0.27
CRTC3-210ENST00000560927 HSP90AA4PQ58FG1 418 aa16.75■□□□□ 0.27
CRTC3-210ENST00000560927 CATIPQ7Z7H3 387 aa16.75■□□□□ 0.27
CRTC3-210ENST00000560927 PHF20Q9BVI0 1012 aa16.75■□□□□ 0.27
CRTC3-210ENST00000560927 KCND1Q9NSA2 647 aa16.75■□□□□ 0.27
CRTC3-210ENST00000560927 ZNF827Q17R98 1081 aa16.75■□□□□ 0.27
CRTC3-210ENST00000560927 NOM1Q5C9Z4 860 aaKnown RBP16.75■□□□□ 0.27
CRTC3-210ENST00000560927 SLC51AQ86UW1 340 aa16.75■□□□□ 0.27
CRTC3-210ENST00000560927 IQCA1Q86XH1 822 aa16.75■□□□□ 0.27
CRTC3-210ENST00000560927 TMEM232C9JQI7 657 aa16.74■□□□□ 0.27
CRTC3-210ENST00000560927 CYP2D6P10635 497 aa16.74■□□□□ 0.27
CRTC3-210ENST00000560927 PIP4K2BP78356 416 aa16.74■□□□□ 0.27
CRTC3-210ENST00000560927 PPP2R5BQ15173 497 aa16.74■□□□□ 0.27
CRTC3-210ENST00000560927 CFAP100Q494V2 611 aa16.74■□□□□ 0.27
CRTC3-210ENST00000560927 TXNRD3Q86VQ6 643 aa16.74■□□□□ 0.27
CRTC3-210ENST00000560927 AMIGO3Q86WK7 504 aa16.74■□□□□ 0.27
CRTC3-210ENST00000560927 ELOA2Q8IYF1 753 aaPredicted RBP16.74■□□□□ 0.27
CRTC3-210ENST00000560927 ZNF579Q8NAF0 562 aaKnown RBP16.74■□□□□ 0.27
CRTC3-210ENST00000560927 MYH6P13533 1939 aa16.74■□□□□ 0.27
CRTC3-210ENST00000560927 PRPF3O43395 683 aaKnown RBP16.74■□□□□ 0.27
CRTC3-210ENST00000560927 ACTN4O43707 911 aaKnown RBP16.74■□□□□ 0.27
CRTC3-210ENST00000560927 FAM47AQ5JRC9 791 aa16.74■□□□□ 0.27
CRTC3-210ENST00000560927 NBPF5PQ86XG9 351 aaPredicted RBP16.74■□□□□ 0.27
CRTC3-210ENST00000560927 NLRP3Q96P20 1036 aa16.74■□□□□ 0.27
CRTC3-210ENST00000560927 SETDB2Q96T68 719 aa16.74■□□□□ 0.27
CRTC3-210ENST00000560927 DCP1AQ9NPI6 582 aaPredicted RBP16.74■□□□□ 0.27
CRTC3-210ENST00000560927 NARFQ9UHQ1 456 aa16.74■□□□□ 0.27
CRTC3-210ENST00000560927 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.74■□□□□ 0.27
CRTC3-210ENST00000560927 HIBADHP31937 336 aaKnown RBP16.73■□□□□ 0.27
CRTC3-210ENST00000560927 KRT2P35908 639 aa16.73■□□□□ 0.27
CRTC3-210ENST00000560927 SARSP49591 514 aaKnown RBP16.73■□□□□ 0.27
CRTC3-210ENST00000560927 FMR1Q06787 632 aaKnown RBP eCLIP16.73■□□□□ 0.27
CRTC3-210ENST00000560927 CCDC94Q9BW85 323 aaPredicted RBP16.73■□□□□ 0.27
CRTC3-210ENST00000560927 CEP131Q9UPN4 1083 aa16.73■□□□□ 0.27
CRTC3-210ENST00000560927 A0A087X0B3 334 aa16.73■□□□□ 0.27
CRTC3-210ENST00000560927 SEMA3EO15041 775 aa16.73■□□□□ 0.27
CRTC3-210ENST00000560927 GOLGA8FQ08AF8 430 aa16.73■□□□□ 0.27
CRTC3-210ENST00000560927 GOLGA8DPQ0D2H9 430 aa16.73■□□□□ 0.27
CRTC3-210ENST00000560927 SLC4A8Q2Y0W8 1093 aa16.73■□□□□ 0.27
CRTC3-210ENST00000560927 NT5DC1Q5TFE4 455 aa16.73■□□□□ 0.27
CRTC3-210ENST00000560927 INTS13Q9NVM9 706 aa16.73■□□□□ 0.27
CRTC3-210ENST00000560927 HOOK1Q9UJC3 728 aaKnown RBP16.73■□□□□ 0.27
CRTC3-210ENST00000560927 TRIM75PA6NK02 468 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms