RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 ISL2Q96A47 359 aa7.69□□□□□ -1.18
PSMA4-221ENST00000560842 GTF2IRD1Q9UHL9 959 aa7.69□□□□□ -1.18
PSMA4-221ENST00000560842 BMP6P22004 513 aa7.68□□□□□ -1.18
PSMA4-221ENST00000560842 NME2P22392 152 aa7.68□□□□□ -1.18
PSMA4-221ENST00000560842 VAMP1P23763 118 aa7.68□□□□□ -1.18
PSMA4-221ENST00000560842 ZNF252P-AS1Q0IIN9 211 aa7.68□□□□□ -1.18
PSMA4-221ENST00000560842 TAF1CQ15572 869 aaPredicted RBP7.68□□□□□ -1.18
PSMA4-221ENST00000560842 LDLRAD1Q5T700 205 aa7.68□□□□□ -1.18
PSMA4-221ENST00000560842 TPTE2Q6XPS3 522 aa7.68□□□□□ -1.18
PSMA4-221ENST00000560842 SSU72Q9NP77 194 aaKnown RBP7.68□□□□□ -1.18
PSMA4-221ENST00000560842 GPN3Q9UHW5 284 aaPredicted RBP7.68□□□□□ -1.18
PSMA4-221ENST00000560842 ARNTP27540 789 aa7.67□□□□□ -1.18
PSMA4-221ENST00000560842 NKPD1Q17RQ9 610 aa7.67□□□□□ -1.18
PSMA4-221ENST00000560842 ZC3H12AQ5D1E8 599 aaKnown RBP7.67□□□□□ -1.18
PSMA4-221ENST00000560842 MEI1Q5TIA1 1274 aa7.67□□□□□ -1.18
PSMA4-221ENST00000560842 SCARA3Q6AZY7 606 aa7.67□□□□□ -1.18
PSMA4-221ENST00000560842 MPZL3Q6UWV2 235 aa7.67□□□□□ -1.18
PSMA4-221ENST00000560842 RNF214Q8ND24 703 aa7.67□□□□□ -1.18
PSMA4-221ENST00000560842 STK35Q8TDR2 534 aa7.67□□□□□ -1.18
PSMA4-221ENST00000560842 KIRREL1Q96J84 757 aa7.67□□□□□ -1.18
PSMA4-221ENST00000560842 NOC4LQ9BVI4 516 aaKnown RBP7.67□□□□□ -1.18
PSMA4-221ENST00000560842 MRS2Q9HD23 443 aa7.67□□□□□ -1.18
PSMA4-221ENST00000560842 NFIBO00712 420 aa7.66□□□□□ -1.18
PSMA4-221ENST00000560842 PAGE1O75459 146 aa7.66□□□□□ -1.18
PSMA4-221ENST00000560842 BUD31P41223 144 aaPredicted RBP7.66□□□□□ -1.18
PSMA4-221ENST00000560842 TMEM67Q5HYA8 995 aa7.66□□□□□ -1.18
PSMA4-221ENST00000560842 CYFIP1Q7L576 1253 aa7.66□□□□□ -1.18
PSMA4-221ENST00000560842 SULF2Q8IWU5 870 aa7.66□□□□□ -1.18
PSMA4-221ENST00000560842 EMILIN2Q9BXX0 1053 aa7.66□□□□□ -1.18
PSMA4-221ENST00000560842 VTI1BQ9UEU0 232 aa7.66□□□□□ -1.18
PSMA4-221ENST00000560842 TTF2Q9UNY4 1162 aaKnown RBP7.66□□□□□ -1.18
PSMA4-221ENST00000560842 FBXO24O75426 580 aa7.65□□□□□ -1.18
PSMA4-221ENST00000560842 CELA3AP09093 270 aa7.65□□□□□ -1.18
PSMA4-221ENST00000560842 ERVK-24P63145 666 aa7.65□□□□□ -1.18
PSMA4-221ENST00000560842 KCNB2Q92953 911 aa7.65□□□□□ -1.18
PSMA4-221ENST00000560842 PITPNM2Q9BZ72 1349 aa7.65□□□□□ -1.18
PSMA4-221ENST00000560842 BCL11AQ9H165 835 aa7.65□□□□□ -1.18
PSMA4-221ENST00000560842 CLCN7P51798 805 aa7.64□□□□□ -1.19
PSMA4-221ENST00000560842 RPS26P62854 115 aaKnown RBP7.64□□□□□ -1.19
PSMA4-221ENST00000560842 RASIP1Q5U651 963 aa7.64□□□□□ -1.19
PSMA4-221ENST00000560842 FBXO15Q8NCQ5 510 aaPredicted RBP7.64□□□□□ -1.19
PSMA4-221ENST00000560842 CYP8B1Q9UNU6 501 aa7.64□□□□□ -1.19
PSMA4-221ENST00000560842 SAMM50Q9Y512 469 aa7.64□□□□□ -1.19
PSMA4-221ENST00000560842 PRDM10Q9NQV6 1147 aa7.63□□□□□ -1.19
PSMA4-221ENST00000560842 C19orf73Q9NVV2 129 aa7.63□□□□□ -1.19
PSMA4-221ENST00000560842 UNCXA6NJT0 531 aa7.62□□□□□ -1.19
PSMA4-221ENST00000560842 RLBP1P12271 317 aa7.62□□□□□ -1.19
PSMA4-221ENST00000560842 CCDC85BQ15834 202 aaPredicted RBP7.62□□□□□ -1.19
PSMA4-221ENST00000560842 PCNX4Q63HM2 1172 aa7.62□□□□□ -1.19
PSMA4-221ENST00000560842 NPIPB6E9PJ23 425 aa7.61□□□□□ -1.19
PSMA4-221ENST00000560842 TRIM37O94972 964 aa7.61□□□□□ -1.19
PSMA4-221ENST00000560842 GDNFP39905 211 aa7.61□□□□□ -1.19
PSMA4-221ENST00000560842 LRRC14Q15048 493 aa7.61□□□□□ -1.19
PSMA4-221ENST00000560842 AGMOQ6ZNB7 445 aa7.61□□□□□ -1.19
PSMA4-221ENST00000560842 BACH2Q9BYV9 841 aa7.61□□□□□ -1.19
PSMA4-221ENST00000560842 KIAA1522Q9P206 1035 aaPredicted RBP7.61□□□□□ -1.19
PSMA4-221ENST00000560842 GNAT3A8MTJ3 354 aa7.6□□□□□ -1.19
PSMA4-221ENST00000560842 TMEM253P0C7T8 217 aa7.6□□□□□ -1.19
PSMA4-221ENST00000560842 TTBK2Q6IQ55 1244 aa7.6□□□□□ -1.19
PSMA4-221ENST00000560842 ERMP1Q7Z2K6 904 aa7.6□□□□□ -1.19
PSMA4-221ENST00000560842 GRIN3AQ8TCU5 1115 aa7.6□□□□□ -1.19
PSMA4-221ENST00000560842 DIRC2Q96SL1 478 aa7.6□□□□□ -1.19
PSMA4-221ENST00000560842 RSRP1Q9BUV0 290 aa7.6□□□□□ -1.19
PSMA4-221ENST00000560842 KRTAP17-1Q9BYP8 105 aa7.6□□□□□ -1.19
PSMA4-221ENST00000560842 NSUN3Q9H649 340 aaKnown RBP7.6□□□□□ -1.19
PSMA4-221ENST00000560842 CARS2Q9HA77 564 aaKnown RBP7.6□□□□□ -1.19
PSMA4-221ENST00000560842 CD320Q9NPF0 282 aa7.6□□□□□ -1.19
PSMA4-221ENST00000560842 EOMESO95936 686 aa7.59□□□□□ -1.19
PSMA4-221ENST00000560842 RECKO95980 971 aa7.59□□□□□ -1.19
PSMA4-221ENST00000560842 INHBBP09529 407 aa7.59□□□□□ -1.19
PSMA4-221ENST00000560842 LIG3P49916 1009 aa7.59□□□□□ -1.19
PSMA4-221ENST00000560842 KCNA10Q16322 511 aa7.59□□□□□ -1.19
PSMA4-221ENST00000560842 LLGL2Q6P1M3 1020 aa7.59□□□□□ -1.19
PSMA4-221ENST00000560842 MRRFQ96E11 262 aaKnown RBP7.59□□□□□ -1.19
PSMA4-221ENST00000560842 MED14OSP0DP75 135 aa7.58□□□□□ -1.2
PSMA4-221ENST00000560842 NTF4P34130 210 aa7.58□□□□□ -1.2
PSMA4-221ENST00000560842 MAP1SQ66K74 1059 aaPredicted RBP7.58□□□□□ -1.2
PSMA4-221ENST00000560842 GPBAR1Q8TDU6 330 aa7.58□□□□□ -1.2
PSMA4-221ENST00000560842 GAL3ST3Q96A11 431 aa7.58□□□□□ -1.2
PSMA4-221ENST00000560842 METTL5Q9NRN9 209 aaKnown RBP7.58□□□□□ -1.2
PSMA4-221ENST00000560842 SEMA3GQ9NS98 782 aa7.58□□□□□ -1.2
PSMA4-221ENST00000560842 CTSWP56202 376 aa7.57□□□□□ -1.2
PSMA4-221ENST00000560842 RING1Q06587 406 aa7.57□□□□□ -1.2
PSMA4-221ENST00000560842 MPRIPQ6WCQ1 1025 aa7.57□□□□□ -1.2
PSMA4-221ENST00000560842 PHC3Q8NDX5 983 aa7.57□□□□□ -1.2
PSMA4-221ENST00000560842 FOXQ1Q9C009 403 aa7.57□□□□□ -1.2
PSMA4-221ENST00000560842 CBX8Q9HC52 389 aa7.57□□□□□ -1.2
PSMA4-221ENST00000560842 MAPK8IP1Q9UQF2 711 aa7.57□□□□□ -1.2
PSMA4-221ENST00000560842 TFE3P19532 575 aaPredicted RBP7.56□□□□□ -1.2
PSMA4-221ENST00000560842 PPM1JQ5JR12 505 aa7.56□□□□□ -1.2
PSMA4-221ENST00000560842 ATG14Q6ZNE5 492 aa7.56□□□□□ -1.2
PSMA4-221ENST00000560842 CCDC84Q86UT8 332 aaPredicted RBP7.56□□□□□ -1.2
PSMA4-221ENST00000560842 TMEM87AQ8NBN3 555 aa7.56□□□□□ -1.2
PSMA4-221ENST00000560842 RHOVQ96L33 236 aa7.56□□□□□ -1.2
PSMA4-221ENST00000560842 HSPA12BQ96MM6 686 aa7.56□□□□□ -1.2
PSMA4-221ENST00000560842 ATP13A1Q9HD20 1204 aa7.56□□□□□ -1.2
PSMA4-221ENST00000560842 PRDM5Q9NQX1 630 aaPredicted RBP7.56□□□□□ -1.2
PSMA4-221ENST00000560842 FANCCQ00597 558 aa7.55□□□□□ -1.2
PSMA4-221ENST00000560842 PTPN11Q06124 597 aaPredicted RBP7.55□□□□□ -1.2
PSMA4-221ENST00000560842 PWP1Q13610 501 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms