RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 HNRNPUQ00839 825 aaKnown RBP eCLIP6.38□□□□□ -1.39
TMOD3-207ENST00000560549 SEPT6Q14141 434 aa6.38□□□□□ -1.39
TMOD3-207ENST00000560549 LDLRAD1Q5T700 205 aa6.38□□□□□ -1.39
TMOD3-207ENST00000560549 ABI1Q8IZP0 508 aa6.38□□□□□ -1.39
TMOD3-207ENST00000560549 PLPPR2Q96GM1 343 aa6.38□□□□□ -1.39
TMOD3-207ENST00000560549 LRRC4CQ9HCJ2 640 aa6.38□□□□□ -1.39
TMOD3-207ENST00000560549 CUL7Q14999 1698 aa6.38□□□□□ -1.39
TMOD3-207ENST00000560549 F6X3S4 739 aa6.37□□□□□ -1.39
TMOD3-207ENST00000560549 RECKO95980 971 aa6.37□□□□□ -1.39
TMOD3-207ENST00000560549 PSMD2Q13200 908 aa6.37□□□□□ -1.39
TMOD3-207ENST00000560549 MRPL58Q14197 206 aaKnown RBP6.37□□□□□ -1.39
TMOD3-207ENST00000560549 ZBTB37Q5TC79 503 aa6.37□□□□□ -1.39
TMOD3-207ENST00000560549 SCARA3Q6AZY7 606 aa6.37□□□□□ -1.39
TMOD3-207ENST00000560549 FBXL18Q96ME1 805 aa6.37□□□□□ -1.39
TMOD3-207ENST00000560549 DUSP23Q9BVJ7 150 aa6.37□□□□□ -1.39
TMOD3-207ENST00000560549 FBRSQ9HAH7 460 aa6.37□□□□□ -1.39
TMOD3-207ENST00000560549 TLR6Q9Y2C9 796 aa6.37□□□□□ -1.39
TMOD3-207ENST00000560549 SAMM50Q9Y512 469 aa6.37□□□□□ -1.39
TMOD3-207ENST00000560549 CLASP1Q7Z460 1538 aa6.37□□□□□ -1.39
TMOD3-207ENST00000560549 FHOD3Q2V2M9 1422 aa6.37□□□□□ -1.39
TMOD3-207ENST00000560549 E9PSI1 815 aa6.36□□□□□ -1.39
TMOD3-207ENST00000560549 TFE3P19532 575 aaPredicted RBP6.36□□□□□ -1.39
TMOD3-207ENST00000560549 LIG3P49916 1009 aa6.36□□□□□ -1.39
TMOD3-207ENST00000560549 LRRC14Q15048 493 aa6.36□□□□□ -1.39
TMOD3-207ENST00000560549 AGMOQ6ZNB7 445 aa6.36□□□□□ -1.39
TMOD3-207ENST00000560549 FAM181AQ8N9Y4 354 aa6.36□□□□□ -1.39
TMOD3-207ENST00000560549 PAK6Q9NQU5 681 aaPredicted RBP6.36□□□□□ -1.39
TMOD3-207ENST00000560549 PCOLCE2Q9UKZ9 415 aa6.36□□□□□ -1.39
TMOD3-207ENST00000560549 ANGEL1Q9UNK9 670 aaKnown RBP6.36□□□□□ -1.39
TMOD3-207ENST00000560549 USP31Q70CQ4 1352 aa6.36□□□□□ -1.39
TMOD3-207ENST00000560549 CEP170Q5SW79 1584 aa6.35□□□□□ -1.39
TMOD3-207ENST00000560549 VAMP1P23763 118 aa6.35□□□□□ -1.39
TMOD3-207ENST00000560549 CYP27C1Q4G0S4 372 aa6.35□□□□□ -1.39
TMOD3-207ENST00000560549 CYFIP1Q7L576 1253 aa6.35□□□□□ -1.39
TMOD3-207ENST00000560549 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.35□□□□□ -1.39
TMOD3-207ENST00000560549 TOP6BLQ8N6T0 577 aa6.35□□□□□ -1.39
TMOD3-207ENST00000560549 NUP160Q12769 1436 aa6.35□□□□□ -1.39
TMOD3-207ENST00000560549 PRAMEF27A3QJZ7 478 aa6.34□□□□□ -1.39
TMOD3-207ENST00000560549 PAX4O43316 350 aa6.34□□□□□ -1.39
TMOD3-207ENST00000560549 XPCQ01831 940 aaPredicted RBP6.34□□□□□ -1.39
TMOD3-207ENST00000560549 NKG7Q16617 165 aa6.34□□□□□ -1.39
TMOD3-207ENST00000560549 WIPI1Q5MNZ9 446 aaPredicted RBP6.34□□□□□ -1.39
TMOD3-207ENST00000560549 FAM214BQ7L5A3 538 aa6.34□□□□□ -1.39
TMOD3-207ENST00000560549 PLD6Q8N2A8 252 aaKnown RBP6.34□□□□□ -1.39
TMOD3-207ENST00000560549 RPS26P62854 115 aaKnown RBP6.34□□□□□ -1.4
TMOD3-207ENST00000560549 FGD1P98174 961 aa6.34□□□□□ -1.4
TMOD3-207ENST00000560549 TAF1CQ15572 869 aaPredicted RBP6.34□□□□□ -1.4
TMOD3-207ENST00000560549 ZNF326Q5BKZ1 582 aaKnown RBP6.34□□□□□ -1.4
TMOD3-207ENST00000560549 KRTAP1-3Q8IUG1 177 aa6.34□□□□□ -1.4
TMOD3-207ENST00000560549 BCL7CQ8WUZ0 217 aaPredicted RBP6.34□□□□□ -1.4
TMOD3-207ENST00000560549 ELMO3Q96BJ8 720 aa6.34□□□□□ -1.4
TMOD3-207ENST00000560549 CRELD1Q96HD1 420 aa6.34□□□□□ -1.4
TMOD3-207ENST00000560549 HEXIM2Q96MH2 286 aaKnown RBP6.34□□□□□ -1.4
TMOD3-207ENST00000560549 MKNK2Q9HBH9 465 aa6.34□□□□□ -1.4
TMOD3-207ENST00000560549 RRBP1Q9P2E9 1410 aaKnown RBP6.33□□□□□ -1.4
TMOD3-207ENST00000560549 CNTNAP4Q9C0A0 1308 aa6.33□□□□□ -1.4
TMOD3-207ENST00000560549 GFRA2O00451 464 aa6.33□□□□□ -1.4
TMOD3-207ENST00000560549 FANCGO15287 622 aa6.33□□□□□ -1.4
TMOD3-207ENST00000560549 ITGB5P18084 799 aa6.33□□□□□ -1.4
TMOD3-207ENST00000560549 ST13P50502 369 aaKnown RBP6.33□□□□□ -1.4
TMOD3-207ENST00000560549 SLBPQ14493 270 aaKnown RBP eCLIP6.33□□□□□ -1.4
TMOD3-207ENST00000560549 ZNF574Q6ZN55 896 aaPredicted RBP6.33□□□□□ -1.4
TMOD3-207ENST00000560549 PHC3Q8NDX5 983 aa6.33□□□□□ -1.4
TMOD3-207ENST00000560549 GOLGA2P5Q9HBQ8 144 aa6.33□□□□□ -1.4
TMOD3-207ENST00000560549 SSU72Q9NP77 194 aaKnown RBP6.33□□□□□ -1.4
TMOD3-207ENST00000560549 MAP3K1Q13233 1512 aa6.32□□□□□ -1.4
TMOD3-207ENST00000560549 LRRC9Q6ZRR7 1453 aa6.32□□□□□ -1.4
TMOD3-207ENST00000560549 SORBS3O60504 671 aa6.32□□□□□ -1.4
TMOD3-207ENST00000560549 HMGB1P09429 215 aaKnown RBP6.32□□□□□ -1.4
TMOD3-207ENST00000560549 OXCT1P55809 520 aa6.32□□□□□ -1.4
TMOD3-207ENST00000560549 TIAM1Q13009 1591 aa6.32□□□□□ -1.4
TMOD3-207ENST00000560549 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
TMOD3-207ENST00000560549 STK11IPQ8N1F8 1099 aa6.32□□□□□ -1.4
TMOD3-207ENST00000560549 AGBL5Q8NDL9 886 aa6.32□□□□□ -1.4
TMOD3-207ENST00000560549 FLCNQ8NFG4 579 aa6.32□□□□□ -1.4
TMOD3-207ENST00000560549 MISP3Q96FF7 219 aa6.32□□□□□ -1.4
TMOD3-207ENST00000560549 PLAGL2Q9UPG8 496 aa6.32□□□□□ -1.4
TMOD3-207ENST00000560549 PHLDB1Q86UU1 1377 aa6.32□□□□□ -1.4
TMOD3-207ENST00000560549 PCF11O94913 1555 aaKnown RBP6.31□□□□□ -1.4
TMOD3-207ENST00000560549 CASKIN1Q8WXD9 1431 aa6.31□□□□□ -1.4
TMOD3-207ENST00000560549 EOMESO95936 686 aa6.31□□□□□ -1.4
TMOD3-207ENST00000560549 CD96P40200 585 aa6.31□□□□□ -1.4
TMOD3-207ENST00000560549 ARMCX6Q7L4S7 300 aa6.31□□□□□ -1.4
TMOD3-207ENST00000560549 SPRED2Q7Z698 418 aa6.31□□□□□ -1.4
TMOD3-207ENST00000560549 RHOVQ96L33 236 aa6.31□□□□□ -1.4
TMOD3-207ENST00000560549 NOC4LQ9BVI4 516 aaKnown RBP6.31□□□□□ -1.4
TMOD3-207ENST00000560549 WNT10AQ9GZT5 417 aa6.31□□□□□ -1.4
TMOD3-207ENST00000560549 VTI1BQ9UEU0 232 aa6.31□□□□□ -1.4
TMOD3-207ENST00000560549 SLC5A6Q9Y289 635 aa6.31□□□□□ -1.4
TMOD3-207ENST00000560549 SHROOM2Q13796 1616 aa6.31□□□□□ -1.4
TMOD3-207ENST00000560549 EFCAB5A4FU69 1503 aa6.3□□□□□ -1.4
TMOD3-207ENST00000560549 GRK4P32298 578 aa6.3□□□□□ -1.4
TMOD3-207ENST00000560549 BNC2Q6ZN30 1099 aaPredicted RBP6.3□□□□□ -1.4
TMOD3-207ENST00000560549 TP53INP2Q8IXH6 220 aa6.3□□□□□ -1.4
TMOD3-207ENST00000560549 NETO1Q8TDF5 533 aa6.3□□□□□ -1.4
TMOD3-207ENST00000560549 PRDM10Q9NQV6 1147 aa6.3□□□□□ -1.4
TMOD3-207ENST00000560549 PICK1Q9NRD5 415 aa6.3□□□□□ -1.4
TMOD3-207ENST00000560549 CCNB3Q8WWL7 1395 aa6.3□□□□□ -1.4
TMOD3-207ENST00000560549 KIAA0586Q9BVV6 1533 aa6.29□□□□□ -1.4
TMOD3-207ENST00000560549 SLITRK5O94991 958 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms