RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 GDF11O95390 407 aa12.4□□□□□ -0.42
SNRPA1-212ENST00000560496 ELNP15502 786 aa12.4□□□□□ -0.42
SNRPA1-212ENST00000560496 CYP7A1P22680 504 aa12.4□□□□□ -0.42
SNRPA1-212ENST00000560496 IRF5Q13568 498 aa12.4□□□□□ -0.42
SNRPA1-212ENST00000560496 AACSQ86V21 672 aa12.4□□□□□ -0.42
SNRPA1-212ENST00000560496 MIGA1Q8NAN2 632 aa12.4□□□□□ -0.42
SNRPA1-212ENST00000560496 GCC1Q96CN9 775 aa12.4□□□□□ -0.42
SNRPA1-212ENST00000560496 WDR18Q9BV38 432 aa12.4□□□□□ -0.42
SNRPA1-212ENST00000560496 ASCC2Q9H1I8 757 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-212ENST00000560496 AS3MTQ9HBK9 375 aa12.4□□□□□ -0.42
SNRPA1-212ENST00000560496 PCDH10Q9P2E7 1040 aa12.4□□□□□ -0.42
SNRPA1-212ENST00000560496 SAP30BPQ9UHR5 308 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-212ENST00000560496 DNAH12Q6ZR08 3092 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 GREB1LQ9C091 1923 aaPredicted RBP12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 ADCY3O60266 1144 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 INHAP05111 366 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 GJB1P08034 283 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 ASNSP08243 561 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 BACE1P56817 501 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 UBXN2AP68543 259 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 HABP4Q5JVS0 413 aaKnown RBP12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 ERC1Q8IUD2 1116 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 SIRT2Q8IXJ6 389 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 MAGEB6Q8N7X4 407 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 PXYLP1Q8TE99 480 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 RIOK1Q9BRS2 568 aaKnown RBP12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 UNC93B1Q9H1C4 597 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 IL1RAPL2Q9NP60 686 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 MORF4L1Q9UBU8 362 aa12.39□□□□□ -0.43
SNRPA1-212ENST00000560496 CEP290O15078 2479 aa12.38□□□□□ -0.43
SNRPA1-212ENST00000560496 HLA-DOAP06340 250 aa12.38□□□□□ -0.43
SNRPA1-212ENST00000560496 GCLCP48506 637 aaPredicted RBP12.38□□□□□ -0.43
SNRPA1-212ENST00000560496 CRACR2BQ8N4Y2 399 aaPredicted RBP12.38□□□□□ -0.43
SNRPA1-212ENST00000560496 RHPN1Q8TCX5 695 aa12.38□□□□□ -0.43
SNRPA1-212ENST00000560496 RNF208Q9H0X6 261 aa12.38□□□□□ -0.43
SNRPA1-212ENST00000560496 EHD4Q9H223 541 aa12.38□□□□□ -0.43
SNRPA1-212ENST00000560496 PEX10O60683 326 aa12.37□□□□□ -0.43
SNRPA1-212ENST00000560496 HOXA7P31268 230 aaPredicted RBP12.37□□□□□ -0.43
SNRPA1-212ENST00000560496 PABPC4Q13310 644 aaKnown RBP eCLIP12.37□□□□□ -0.43
SNRPA1-212ENST00000560496 TATDN1Q6P1N9 297 aa12.37□□□□□ -0.43
SNRPA1-212ENST00000560496 POTEEQ6S8J3 1075 aa12.37□□□□□ -0.43
SNRPA1-212ENST00000560496 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
SNRPA1-212ENST00000560496 NKX2-3Q8TAU0 364 aa12.37□□□□□ -0.43
SNRPA1-212ENST00000560496 U2AF1L4Q8WU68 220 aaKnown RBP12.37□□□□□ -0.43
SNRPA1-212ENST00000560496 TXNRD2Q9NNW7 524 aa12.37□□□□□ -0.43
SNRPA1-212ENST00000560496 PAK6Q9NQU5 681 aaPredicted RBP12.37□□□□□ -0.43
SNRPA1-212ENST00000560496 GINM1Q9NU53 330 aa12.37□□□□□ -0.43
SNRPA1-212ENST00000560496 ZBTB40Q9NUA8 1239 aa12.37□□□□□ -0.43
SNRPA1-212ENST00000560496 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
SNRPA1-212ENST00000560496 TCRBV5S4A2TA0A5A2 114 aa12.36□□□□□ -0.43
SNRPA1-212ENST00000560496 USP17L10C9JJH3 530 aa12.36□□□□□ -0.43
SNRPA1-212ENST00000560496 HERVK_113P62684 666 aa12.36□□□□□ -0.43
SNRPA1-212ENST00000560496 EVX2Q03828 476 aa12.36□□□□□ -0.43
SNRPA1-212ENST00000560496 TMED8Q6PL24 325 aaPredicted RBP12.36□□□□□ -0.43
SNRPA1-212ENST00000560496 FOXP4Q8IVH2 680 aaPredicted RBP12.36□□□□□ -0.43
SNRPA1-212ENST00000560496 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
SNRPA1-212ENST00000560496 COA7Q96BR5 231 aa12.36□□□□□ -0.43
SNRPA1-212ENST00000560496 C12orf42Q96LP6 360 aa12.36□□□□□ -0.43
SNRPA1-212ENST00000560496 BIN2Q9UBW5 565 aaPredicted RBP12.36□□□□□ -0.43
SNRPA1-212ENST00000560496 DDX19BQ9UMR2 479 aa12.36□□□□□ -0.43
SNRPA1-212ENST00000560496 COG6Q9Y2V7 657 aa12.36□□□□□ -0.43
SNRPA1-212ENST00000560496 FARP2O94887 1054 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 GH2P01242 217 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 PDE6AP16499 860 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 SHMT1P34896 483 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 USP5P45974 858 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 FXR1P51114 621 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 IRX3P78415 501 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 GABPAQ06546 454 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 MAP3K12Q12852 859 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 HSP90AB4PQ58FF6 505 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 TRIB2Q92519 343 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 KIF1BPQ96EK5 621 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 EDC3Q96F86 508 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 TRIM34Q9BYJ4 488 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 EMILIN3Q9NT22 766 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 TMOD4Q9NZQ9 345 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 SERPINB13Q9UIV8 391 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 GJD2Q9UKL4 321 aa12.35□□□□□ -0.43
SNRPA1-212ENST00000560496 C19orf81C9J6K1 198 aa12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 H0YGN5 161 aa12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 SGPL1O95470 568 aa12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 HMGCRP04035 888 aa12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 GUCY1A2P33402 732 aa12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 PLCD1P51178 756 aa12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 TRIM32Q13049 653 aa12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 RPAP2Q8IXW5 612 aaPredicted RBP12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 P2RX7Q99572 595 aaKnown RBP12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 CRISPLD2Q9H0B8 497 aa12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 TAOK2Q9UL54 1235 aa12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 ZNF532Q9HCE3 1301 aa12.34□□□□□ -0.43
SNRPA1-212ENST00000560496 MAGEB6P1A0A0J9YX57 407 aa12.33□□□□□ -0.44
SNRPA1-212ENST00000560496 APBB1O00213 710 aa12.33□□□□□ -0.44
SNRPA1-212ENST00000560496 GOLIM4O00461 696 aa12.33□□□□□ -0.44
SNRPA1-212ENST00000560496 MS4A1P11836 297 aa12.33□□□□□ -0.44
SNRPA1-212ENST00000560496 ERVK-9P63128 1117 aa12.33□□□□□ -0.44
SNRPA1-212ENST00000560496 ERVK-24P63145 666 aa12.33□□□□□ -0.44
SNRPA1-212ENST00000560496 TTF1Q15361 905 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms