RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 RGS3P49796 1198 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 TSHZ3Q63HK5 1081 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 DCAF15Q66K64 600 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 MIGA2Q7L4E1 593 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 MIGA1Q8NAN2 632 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 TTC13Q8NBP0 860 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 CCDC102AQ96A19 550 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 GCC1Q96CN9 775 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 SLC10A4Q96EP9 437 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 ZNF512BQ96KM6 892 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-219ENST00000560483 PAPPA2Q9BXP8 1791 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.69□□□□□ -0.86
LRRC28-219ENST00000560483 ECHDC1Q9NTX5 307 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 PAG1Q9NWQ8 432 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 MYO5AQ9Y4I1 1855 aaKnown RBP9.69□□□□□ -0.86
LRRC28-219ENST00000560483 CSADQ9Y600 493 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 AKAP11Q9UKA4 1901 aa9.68□□□□□ -0.86
LRRC28-219ENST00000560483 SPDYE16A6NNV3 312 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-219ENST00000560483 ERC2O15083 957 aa9.68□□□□□ -0.86
LRRC28-219ENST00000560483 MAP4K4O95819 1239 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-219ENST00000560483 HSPA1AP0DMV8 641 aaKnown RBP9.68□□□□□ -0.86
LRRC28-219ENST00000560483 HSPA1BP0DMV9 641 aaKnown RBP9.68□□□□□ -0.86
LRRC28-219ENST00000560483 USP5P45974 858 aa9.68□□□□□ -0.86
LRRC28-219ENST00000560483 MAP2K1Q02750 393 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-219ENST00000560483 NFIAQ12857 509 aa9.68□□□□□ -0.86
LRRC28-219ENST00000560483 NOGQ13253 232 aa9.68□□□□□ -0.86
LRRC28-219ENST00000560483 SLC9C2Q5TAH2 1124 aa9.68□□□□□ -0.86
LRRC28-219ENST00000560483 FAM83AQ86UY5 434 aa9.68□□□□□ -0.86
LRRC28-219ENST00000560483 CSRNP1Q96S65 589 aa9.68□□□□□ -0.86
LRRC28-219ENST00000560483 ANTXR1Q9H6X2 564 aa9.68□□□□□ -0.86
LRRC28-219ENST00000560483 GAKO14976 1311 aa9.67□□□□□ -0.86
LRRC28-219ENST00000560483 GPR75-ASB3A0A0A6YYF3 556 aa9.67□□□□□ -0.86
LRRC28-219ENST00000560483 CENPBP07199 599 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-219ENST00000560483 ATP5JP18859 108 aa9.67□□□□□ -0.86
LRRC28-219ENST00000560483 SLC4A8Q2Y0W8 1093 aa9.67□□□□□ -0.86
LRRC28-219ENST00000560483 MAPKAPK5Q8IW41 473 aa9.67□□□□□ -0.86
LRRC28-219ENST00000560483 SH3RF3Q8TEJ3 882 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-219ENST00000560483 TGFBRAP1Q8WUH2 860 aa9.67□□□□□ -0.86
LRRC28-219ENST00000560483 FAM151AQ8WW52 585 aa9.67□□□□□ -0.86
LRRC28-219ENST00000560483 EDC3Q96F86 508 aaKnown RBP9.67□□□□□ -0.86
LRRC28-219ENST00000560483 WRNIP1Q96S55 665 aa9.67□□□□□ -0.86
LRRC28-219ENST00000560483 LNPKQ9C0E8 428 aa9.67□□□□□ -0.86
LRRC28-219ENST00000560483 ELP3Q9H9T3 547 aa9.67□□□□□ -0.86
LRRC28-219ENST00000560483 MAST2Q6P0Q8 1798 aa9.67□□□□□ -0.86
LRRC28-219ENST00000560483 MAGEB6P1A0A0J9YX57 407 aa9.66□□□□□ -0.86
LRRC28-219ENST00000560483 MX1P20591 662 aa9.66□□□□□ -0.86
LRRC28-219ENST00000560483 DYNLL1P63167 89 aaKnown RBP9.66□□□□□ -0.86
LRRC28-219ENST00000560483 HDAC1Q13547 482 aaPredicted RBP9.66□□□□□ -0.86
LRRC28-219ENST00000560483 FKBP1CQ5VVH2 108 aa9.66□□□□□ -0.86
LRRC28-219ENST00000560483 ZSCAN25Q6NSZ9 544 aa9.66□□□□□ -0.86
LRRC28-219ENST00000560483 ANKRD13AQ8IZ07 590 aa9.66□□□□□ -0.86
LRRC28-219ENST00000560483 CRACR2BQ8N4Y2 399 aaPredicted RBP9.66□□□□□ -0.86
LRRC28-219ENST00000560483 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.66□□□□□ -0.86
LRRC28-219ENST00000560483 HHIPL1Q96JK4 782 aa9.66□□□□□ -0.86
LRRC28-219ENST00000560483 HAUS7Q99871 368 aa9.66□□□□□ -0.86
LRRC28-219ENST00000560483 ZNF341Q9BYN7 854 aa9.66□□□□□ -0.86
LRRC28-219ENST00000560483 SAP30BPQ9UHR5 308 aaKnown RBP9.66□□□□□ -0.86
LRRC28-219ENST00000560483 ZNF532Q9HCE3 1301 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 RNF223E7ERA6 249 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 ENTPD3O75355 529 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 USP2O75604 605 aaPredicted RBP9.65□□□□□ -0.86
LRRC28-219ENST00000560483 HLA-DOAP06340 250 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 SLC10A3P09131 477 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 PDE6AP16499 860 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 MAP2K2P36507 400 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 KIF23Q02241 960 aaPredicted RBP9.65□□□□□ -0.86
LRRC28-219ENST00000560483 LRRFIP1Q32MZ4 808 aaKnown RBP9.65□□□□□ -0.86
LRRC28-219ENST00000560483 BLOC1S3Q6QNY0 202 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 ADGRA1Q86SQ6 560 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 RASAL3Q86YV0 1011 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 ZFPM1Q8IX07 1006 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 DDRGK1Q96HY6 314 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 CLMNQ96JQ2 1002 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 FSD1Q9BTV5 496 aa9.65□□□□□ -0.86
LRRC28-219ENST00000560483 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.65□□□□□ -0.86
LRRC28-219ENST00000560483 TTC41PQ6P2S7 1318 aa9.64□□□□□ -0.87
LRRC28-219ENST00000560483 WDHD1O75717 1129 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-219ENST00000560483 GLRX3O76003 335 aaKnown RBP9.64□□□□□ -0.87
LRRC28-219ENST00000560483 POLR3DP05423 398 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-219ENST00000560483 SREBF2Q12772 1141 aa9.64□□□□□ -0.87
LRRC28-219ENST00000560483 CERS3Q8IU89 383 aa9.64□□□□□ -0.87
LRRC28-219ENST00000560483 AMOTL1Q8IY63 956 aa9.64□□□□□ -0.87
LRRC28-219ENST00000560483 JMYQ8N9B5 988 aa9.64□□□□□ -0.87
LRRC28-219ENST00000560483 OTUD7AQ8TE49 926 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-219ENST00000560483 ZNF384Q8TF68 577 aa9.64□□□□□ -0.87
LRRC28-219ENST00000560483 ZKSCAN4Q969J2 545 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-219ENST00000560483 OPTNQ96CV9 577 aa9.64□□□□□ -0.87
LRRC28-219ENST00000560483 TEPSINQ96N21 525 aa9.64□□□□□ -0.87
LRRC28-219ENST00000560483 IDI2Q9BXS1 227 aa9.64□□□□□ -0.87
LRRC28-219ENST00000560483 CRNKL1Q9BZJ0 848 aaKnown RBP9.64□□□□□ -0.87
LRRC28-219ENST00000560483 DDX4Q9NQI0 724 aaKnown RBP9.64□□□□□ -0.87
LRRC28-219ENST00000560483 PICK1Q9NRD5 415 aa9.64□□□□□ -0.87
LRRC28-219ENST00000560483 DOCK2Q92608 1830 aa9.63□□□□□ -0.87
LRRC28-219ENST00000560483 MYH7P12883 1935 aa9.63□□□□□ -0.87
LRRC28-219ENST00000560483 DDTLA6NHG4 134 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-219ENST00000560483 IGSF3O75054 1194 aa9.63□□□□□ -0.87
LRRC28-219ENST00000560483 IGHDP01880 384 aa9.63□□□□□ -0.87
LRRC28-219ENST00000560483 CTCFP49711 727 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-219ENST00000560483 RHBDL3P58872 404 aa9.63□□□□□ -0.87
LRRC28-219ENST00000560483 VGLL4Q14135 290 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms